BLASTX nr result

ID: Rehmannia28_contig00041201 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00041201
         (463 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015793328.1| PREDICTED: putative ATP-dependent RNA helica...    82   3e-15
ref|XP_002131676.1| PREDICTED: putative ATP-dependent RNA helica...    59   1e-07
ref|XP_002131667.1| PREDICTED: putative ATP-dependent RNA helica...    59   1e-07
ref|XP_792543.2| PREDICTED: putative ATP-dependent RNA helicase ...    59   2e-07
ref|XP_003390576.2| PREDICTED: putative ATP-dependent RNA helica...    58   5e-07
ref|XP_003386673.2| PREDICTED: uncharacterized protein LOC100638...    58   6e-07
ref|XP_013780435.1| PREDICTED: putative ATP-dependent RNA helica...    57   7e-07
ref|XP_002732327.2| PREDICTED: putative ATP-dependent RNA helica...    55   6e-06

>ref|XP_015793328.1| PREDICTED: putative ATP-dependent RNA helicase DHX33 [Tetranychus
           urticae]
          Length = 665

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 38/40 (95%), Positives = 39/40 (97%)
 Frame = +3

Query: 204 KMSEEKVFIHPSSCLFNVKPEYVIYSELVQTSKCYMRLVS 323
           KMSEEKVFIHPSSCLFNVKPEYVIYSELVQTSKCYMR +S
Sbjct: 605 KMSEEKVFIHPSSCLFNVKPEYVIYSELVQTSKCYMRNIS 644


>ref|XP_002131676.1| PREDICTED: putative ATP-dependent RNA helicase DHX33 isoform X2
           [Ciona intestinalis]
          Length = 524

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 30/44 (68%)
 Frame = +3

Query: 210 SEEKVFIHPSSCLFNVKPEYVIYSELVQTSKCYMRLVSF*NDLC 341
           S E V IHPSSCLF  KP YV+Y EL+ TSKCYMR      DLC
Sbjct: 464 SNETVLIHPSSCLFQSKPSYVVYRELIHTSKCYMR------DLC 501


>ref|XP_002131667.1| PREDICTED: putative ATP-dependent RNA helicase DHX33 isoform X1
           [Ciona intestinalis]
          Length = 648

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 30/44 (68%)
 Frame = +3

Query: 210 SEEKVFIHPSSCLFNVKPEYVIYSELVQTSKCYMRLVSF*NDLC 341
           S E V IHPSSCLF  KP YV+Y EL+ TSKCYMR      DLC
Sbjct: 588 SNETVLIHPSSCLFQSKPSYVVYRELIHTSKCYMR------DLC 625


>ref|XP_792543.2| PREDICTED: putative ATP-dependent RNA helicase DHX33 isoform X1
           [Strongylocentrotus purpuratus]
           gi|780123927|ref|XP_011678314.1| PREDICTED: putative
           ATP-dependent RNA helicase DHX33 isoform X2
           [Strongylocentrotus purpuratus]
          Length = 664

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +3

Query: 213 EEKVFIHPSSCLFNVKPEYVIYSELVQTSKCYMRLV 320
           ++ V IHPSSCLF  KP Y++YSELVQTSKCYMR V
Sbjct: 605 KQTVSIHPSSCLFQCKPSYLLYSELVQTSKCYMRNV 640


>ref|XP_003390576.2| PREDICTED: putative ATP-dependent RNA helicase DHX33 [Amphimedon
           queenslandica]
          Length = 646

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 26/41 (63%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
 Frame = +3

Query: 207 MSEEKVFIHPSSCLFNVKPE--YVIYSELVQTSKCYMRLVS 323
           +S ++VFIHPSSCLF+V P   +V+Y+ELV T+KCYMR+VS
Sbjct: 580 LSRQEVFIHPSSCLFSVTPPPPFVMYTELVHTTKCYMRMVS 620


>ref|XP_003386673.2| PREDICTED: uncharacterized protein LOC100638214 [Amphimedon
           queenslandica]
          Length = 2014

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 26/41 (63%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
 Frame = +3

Query: 207 MSEEKVFIHPSSCLFNVKPE--YVIYSELVQTSKCYMRLVS 323
           +S ++VFIHPSSCLF+V P   +V+Y+ELV T+KCYMR+VS
Sbjct: 587 LSRQEVFIHPSSCLFSVTPPPPFVMYTELVHTTKCYMRMVS 627


>ref|XP_013780435.1| PREDICTED: putative ATP-dependent RNA helicase DHX33 [Limulus
           polyphemus]
          Length = 654

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 24/38 (63%), Positives = 32/38 (84%)
 Frame = +3

Query: 210 SEEKVFIHPSSCLFNVKPEYVIYSELVQTSKCYMRLVS 323
           + ++V IHPSSCLF  KP YV+++EL+QTSKCYMR +S
Sbjct: 593 TRQRVTIHPSSCLFVNKPAYVVFTELIQTSKCYMRYLS 630


>ref|XP_002732327.2| PREDICTED: putative ATP-dependent RNA helicase DHX33-like
           [Saccoglossus kowalevskii]
          Length = 664

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = +3

Query: 216 EKVFIHPSSCLFNVKPEYVIYSELVQTSKCYMR 314
           + V IHPSSCLF  KP YV+Y+ELV T+KCYMR
Sbjct: 605 QSVSIHPSSCLFQCKPAYVLYNELVYTTKCYMR 637


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