BLASTX nr result

ID: Rehmannia28_contig00041060 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00041060
         (619 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015792463.1| PREDICTED: uncharacterized protein LOC107369...   330   e-111
ref|XP_015792596.1| PREDICTED: uncharacterized protein LOC107369...   218   2e-67
ref|XP_013883723.1| PREDICTED: transcription intermediary factor...    57   5e-06

>ref|XP_015792463.1| PREDICTED: uncharacterized protein LOC107369066 [Tetranychus
           urticae]
          Length = 374

 Score =  330 bits (846), Expect = e-111
 Identities = 175/217 (80%), Positives = 176/217 (81%), Gaps = 12/217 (5%)
 Frame = -3

Query: 617 VYHSQPIHYSAEVAPKVYSGAVNYKVVPSTWSDESYVPSTWSGYYSAGLPVPKVEXXXXX 438
           VYHSQPIHYSAEVAPKVYSGAVNYKVVPSTWSDESYVPSTWSGYYSAGLPV KVE     
Sbjct: 85  VYHSQPIHYSAEVAPKVYSGAVNYKVVPSTWSDESYVPSTWSGYYSAGLPVAKVEKQVAP 144

Query: 437 XXXXXXXXXXXXXXXXXXXXP--FQYSTEIVHDVPAKKEEVSYNVASPAVSGVRSVSVAP 264
                               P  FQYSTEIVHDVPAKKEEVSYNVASPAVSGVRSVSVAP
Sbjct: 145 KAIAAPAVKVEEVAADVAVAPKPFQYSTEIVHDVPAKKEEVSYNVASPAVSGVRSVSVAP 204

Query: 263 QVAPVNKVVSAPAQYSAWSGEVAAPAPASGSWVSDVK---------PATWTSEVKPAVWA 111
           QVAPVNKVVSAPAQYSAWSGEVAAPAP SGSWVSDVK         PATWTSEVKPAVWA
Sbjct: 205 QVAPVNKVVSAPAQYSAWSGEVAAPAPVSGSWVSDVKPATWTSDVKPATWTSEVKPAVWA 264

Query: 110 SDVKPSSWASEVKPVGWTSEIKPASWAQPWA-PKPSF 3
           SDVKPSSWASEVKPVGWTSEIKPASWA  WA PKPS+
Sbjct: 265 SDVKPSSWASEVKPVGWTSEIKPASWA--WAQPKPSY 299


>ref|XP_015792596.1| PREDICTED: uncharacterized protein LOC107369182 [Tetranychus
           urticae]
          Length = 322

 Score =  218 bits (555), Expect = 2e-67
 Identities = 126/200 (63%), Positives = 138/200 (69%), Gaps = 8/200 (4%)
 Frame = -3

Query: 617 VYHSQPIHYSAEVAPKVYSGAVNYKVVPSTWSDESYVPSTWSGYYSAGLPVPKVEXXXXX 438
           VYHSQPIHYS  VAPKVYSGAVNYKVVPSTWSDESYVPSTWSGYYSAGL  PKV      
Sbjct: 86  VYHSQPIHYSTGVAPKVYSGAVNYKVVPSTWSDESYVPSTWSGYYSAGLSAPKV-----A 140

Query: 437 XXXXXXXXXXXXXXXXXXXXPFQYSTEIVHDVPAKKEEVSYNVASPAVSGVRSVSVAPQV 258
                               PFQYSTEI HDVP K EEVSYNVAS A    RSVSV PQ 
Sbjct: 141 KAISAPAVKVEEVAADVAPKPFQYSTEISHDVPVKNEEVSYNVASQAFP-ARSVSVGPQY 199

Query: 257 APVNKVVSAPAQYSAWSGEVAAPAPASGSWVSDVKPATWT-SEVKPAV----WASDVKPS 93
           A V+ VVSAPAQYSAWSGEVA   PASGSWVSDVKPA+W  ++ KP+     W  DVKP+
Sbjct: 200 ATVSNVVSAPAQYSAWSGEVA--VPASGSWVSDVKPASWAWAQPKPSYRQGNWV-DVKPA 256

Query: 92  SWA--SEVKPVG-WTSEIKP 42
           SW+  S+ KP+  + S ++P
Sbjct: 257 SWSSWSDAKPLNTYVSSVQP 276


>ref|XP_013883723.1| PREDICTED: transcription intermediary factor 1-beta-like
           [Austrofundulus limnaeus]
          Length = 785

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
 Frame = -3

Query: 341 PAKKEEVSYNVASPAVSGVRSVSVAPQVAPVNKVVSAPAQYSAWSGEVAAPAPASGSWV- 165
           PA+   VS  V SP     RS  V+ Q        S     S+W+   ++  P+  SW  
Sbjct: 670 PARSLGVS--VQSPGTPA-RSSGVSVQSPGTTAQSSGFPSQSSWTPAQSSGFPSQSSWTP 726

Query: 164 -SDVKPATWTSEVKPAVWASDVKPSSWASEVKPVGWTSEIKPASWAQPWAP 15
                PA W   + PAVW   + P+ W   + P  W   I PA W  P +P
Sbjct: 727 AQSSGPAVWFDPISPAVWFDPISPAVWFDPISPAVWFDSISPAVWFDPISP 777


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