BLASTX nr result
ID: Rehmannia28_contig00040548
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00040548
(568 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011084698.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-10
ref|XP_012834852.1| PREDICTED: pentatricopeptide repeat-containi... 67 9e-10
emb|CBI27634.3| unnamed protein product [Vitis vinifera] 63 1e-08
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi... 63 2e-08
ref|XP_009762033.1| PREDICTED: pentatricopeptide repeat-containi... 63 3e-08
ref|XP_009604735.1| PREDICTED: pentatricopeptide repeat-containi... 63 3e-08
ref|XP_010263105.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_008777805.1| PREDICTED: pentatricopeptide repeat-containi... 59 8e-07
ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_015056848.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
emb|CDP04141.1| unnamed protein product [Coffea canephora] 58 1e-06
ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Popu... 58 1e-06
ref|XP_006386676.1| pentatricopeptide repeat-containing family p... 58 1e-06
ref|XP_009414785.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_011025317.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_010916806.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
ref|XP_010522872.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
ref|XP_008244171.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
gb|ERM95300.1| hypothetical protein AMTR_s00008p00117710 [Ambore... 56 6e-06
>ref|XP_011084698.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Sesamum indicum]
Length = 831
Score = 69.3 bits (168), Expect = 1e-10
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDAS 114
GCAPNHVTDT LDFLE EIE+LRY+KASIMRSN DD S
Sbjct: 794 GCAPNHVTDTTLDFLEKEIEKLRYQKASIMRSNRDDPS 831
>ref|XP_012834852.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Erythranthe guttata]
Length = 833
Score = 67.0 bits (162), Expect = 9e-10
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDAS 114
GCAPNHVTDT+LD+LE EIE++RYKKAS+MR N DD S
Sbjct: 794 GCAPNHVTDTVLDYLEKEIEKVRYKKASMMRCNKDDPS 831
>emb|CBI27634.3| unnamed protein product [Vitis vinifera]
Length = 355
Score = 63.2 bits (152), Expect = 1e-08
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDAS 114
GC+PNHVTDT LDFL EIE+LRYKKASI+R++ DD+S
Sbjct: 318 GCSPNHVTDTTLDFLGKEIEKLRYKKASIIRTSKDDSS 355
>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Vitis vinifera]
Length = 792
Score = 63.2 bits (152), Expect = 2e-08
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDAS 114
GC+PNHVTDT LDFL EIE+LRYKKASI+R++ DD+S
Sbjct: 755 GCSPNHVTDTTLDFLGKEIEKLRYKKASIIRTSKDDSS 792
>ref|XP_009762033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Nicotiana sylvestris] gi|698441696|ref|XP_009762044.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g01570 [Nicotiana sylvestris]
gi|698441708|ref|XP_009762056.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g01570
[Nicotiana sylvestris] gi|698441714|ref|XP_009762062.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g01570 [Nicotiana sylvestris]
gi|698441723|ref|XP_009762073.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g01570
[Nicotiana sylvestris]
Length = 816
Score = 62.8 bits (151), Expect = 3e-08
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDA 111
GCAPNHVTDT LDFLE EIE+LRY+KASI R N D++
Sbjct: 779 GCAPNHVTDTTLDFLEKEIEKLRYQKASIKRPNVDNS 815
>ref|XP_009604735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Nicotiana tomentosiformis]
gi|697191337|ref|XP_009604736.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g01570
[Nicotiana tomentosiformis]
Length = 816
Score = 62.8 bits (151), Expect = 3e-08
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDA 111
GCAPNHVTDT LDFLE EIE+LRY+KASI R N D++
Sbjct: 779 GCAPNHVTDTTLDFLEKEIEKLRYQKASIKRPNVDNS 815
>ref|XP_010263105.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Nelumbo nucifera] gi|720022660|ref|XP_010263106.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g01570 [Nelumbo nucifera]
gi|720022664|ref|XP_010263107.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g01570
[Nelumbo nucifera] gi|720022668|ref|XP_010263108.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g01570 [Nelumbo nucifera]
Length = 795
Score = 60.8 bits (146), Expect = 1e-07
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDA 111
GC+PNHVTDT LDFLE EIE+LRY+KASI +N +DA
Sbjct: 758 GCSPNHVTDTTLDFLEKEIEKLRYQKASIKPNNKEDA 794
>ref|XP_008777805.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Phoenix dactylifera]
Length = 1380
Score = 58.5 bits (140), Expect = 8e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMR 93
GC+PNHVTDTILDFLE EIERLRY+KAS+ R
Sbjct: 1339 GCSPNHVTDTILDFLEKEIERLRYEKASMKR 1369
>ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Solanum tuberosum]
Length = 816
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDD 108
GCAPN VTDT LDFLE EIE+LRY+KAS+ R N D+
Sbjct: 779 GCAPNQVTDTTLDFLEKEIEKLRYQKASMKRPNVDN 814
>ref|XP_015056848.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Solanum pennellii] gi|970060184|ref|XP_015056849.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g01570 [Solanum pennellii]
Length = 819
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDD 108
GCAPN VTDT LDFLE EIE+LRY+KAS+ R N D+
Sbjct: 782 GCAPNQVTDTTLDFLEKEIEKLRYQKASMKRPNVDN 817
>ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Solanum lycopersicum]
Length = 819
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDD 108
GCAPN VTDT LDFLE EIE+LRY+KAS+ R N D+
Sbjct: 782 GCAPNQVTDTTLDFLEKEIEKLRYQKASMKRPNVDN 817
>emb|CDP04141.1| unnamed protein product [Coffea canephora]
Length = 820
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDAS 114
GCAPNHVTDT LDFLE EIE+LRY KAS+ RS DD S
Sbjct: 784 GCAPNHVTDTTLDFLEMEIEKLRYHKASMNRS-ADDCS 820
>ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Populus trichocarpa]
gi|550345304|gb|EEE81962.2| hypothetical protein
POPTR_0002s18390g [Populus trichocarpa]
Length = 776
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTD 105
GC PNHVTDT LDFL EIE+LRY+KASIMR D
Sbjct: 740 GCLPNHVTDTTLDFLAKEIEKLRYQKASIMRQKDD 774
>ref|XP_006386676.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550345301|gb|ERP64473.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 776
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTD 105
GC PNHVTDT LDFL EIE+LRY+KASIMR D
Sbjct: 740 GCLPNHVTDTTLDFLAKEIEKLRYQKASIMRQKDD 774
>ref|XP_009414785.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Musa acuminata subsp. malaccensis]
Length = 790
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTD 105
GC+PNHVTDT LDFLE EIERLRY+KASI R +
Sbjct: 752 GCSPNHVTDTTLDFLEMEIERLRYQKASIKRDREE 786
>ref|XP_011025317.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Populus euphratica]
Length = 820
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTD 105
GC PNHVTDT LDFL EIE+LRY+KASIMR D
Sbjct: 784 GCLPNHVTDTTLDFLAKEIEKLRYQKASIMRQKDD 818
>ref|XP_010916806.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Elaeis guineensis]
Length = 1391
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTD 105
GC+PNHVTDTILDFLE EIERLRY++AS+ R +
Sbjct: 1355 GCSPNHVTDTILDFLEKEIERLRYQEASMKRDTEE 1389
>ref|XP_010522872.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Tarenaya hassleriana]
Length = 802
Score = 57.0 bits (136), Expect = 2e-06
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDD 108
GC+PNHVTDTILD+L E+E+ R+KKAS +RS+T+D
Sbjct: 767 GCSPNHVTDTILDYLGKEMEKSRFKKASFVRSDTND 802
>ref|XP_008244171.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Prunus mume]
Length = 638
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMRSNTD 105
GC+PNHVTDT LDFL EIE+LRY+KAS++R+ D
Sbjct: 602 GCSPNHVTDTTLDFLGKEIEKLRYQKASMVRNKDD 636
>gb|ERM95300.1| hypothetical protein AMTR_s00008p00117710 [Amborella trichopoda]
Length = 788
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 1 GCAPNHVTDTILDFLESEIERLRYKKASIMR 93
GC PNH+TDTILDFLE EIE+LRY+KAS+ R
Sbjct: 752 GCPPNHITDTILDFLEREIEKLRYEKASMKR 782