BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00039601
         (302 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]   151   6e-42
emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]   147   4e-39
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   146   6e-39
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]   140   1e-36
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          136   2e-35
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   133   2e-34
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   133   2e-34
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]               124   3e-31
gb|AAX96359.1| retrotransposon protein, putative, Ty1-copia sub-...   120   9e-30
gb|EEE65861.1| hypothetical protein OsJ_21651 [Oryza sativa Japo...   119   2e-29
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]   119   2e-29
gb|EEE58211.1| hypothetical protein OsJ_09170 [Oryza sativa Japo...   117   3e-29
gb|ABA97586.1| retrotransposon protein, putative, Ty1-copia subc...   118   4e-29
gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subc...   118   4e-29
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   118   4e-29
gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sat...   118   4e-29
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa...   118   4e-29
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc...   118   4e-29
gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subc...   118   6e-29
gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group...   118   6e-29

>emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]
          Length = 474

 Score =  151 bits (382), Expect = 6e-42
 Identities = 69/86 (80%), Positives = 77/86 (89%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           LIH+D+CDLK VQTRGGKKYFITFIDDCTRYCYVYLLKSKDEA+  FK YKNEVENQLS+
Sbjct: 387 LIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAIEMFKHYKNEVENQLSK 446

Query: 182 RIKIIRSDRGGEYGAPFDEFCSDSSI 259
           +IK IRSDRGGEY +PF+EFC +  I
Sbjct: 447 KIKAIRSDRGGEYESPFEEFCLEHGI 472


>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
          Length = 839

 Score =  147 bits (370), Expect = 4e-39
 Identities = 69/86 (80%), Positives = 73/86 (84%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           LIH D+CDLK VQTRGGK YFITFIDDC RYCYVYLL+SKDEAL  FK YKNEVENQLSR
Sbjct: 327 LIHNDICDLKFVQTRGGKMYFITFIDDCIRYCYVYLLRSKDEALDVFKHYKNEVENQLSR 386

Query: 182 RIKIIRSDRGGEYGAPFDEFCSDSSI 259
           +IK IRSDRGG+Y APF EFCS   I
Sbjct: 387 KIKAIRSDRGGKYEAPFGEFCSKHGI 412


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  146 bits (369), Expect = 6e-39
 Identities = 67/86 (77%), Positives = 75/86 (87%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           L H+D+CDLK VQTRGGKKYFITFIDDCTRYCYVYLLKSKDEA+  FK YK EVENQLS+
Sbjct: 659 LFHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAIEMFKHYKIEVENQLSK 718

Query: 182 RIKIIRSDRGGEYGAPFDEFCSDSSI 259
           +IK IRSDRGGEY +PF+EFC +  I
Sbjct: 719 KIKAIRSDRGGEYESPFEEFCLEHGI 744


>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score =  140 bits (352), Expect = 1e-36
 Identities = 65/86 (75%), Positives = 72/86 (83%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           LIH+D+CDL  VQ RGGK+YFITFIDDCTRY YVYLL+ KDEAL  FK YKNEVENQLS+
Sbjct: 186 LIHSDICDLMFVQKRGGKRYFITFIDDCTRYYYVYLLRRKDEALDVFKHYKNEVENQLSK 245

Query: 182 RIKIIRSDRGGEYGAPFDEFCSDSSI 259
            IK I+SDRGGEY APF EFCS+  I
Sbjct: 246 NIKAIKSDRGGEYDAPFGEFCSEHGI 271


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  136 bits (342), Expect = 2e-35
 Identities = 63/86 (73%), Positives = 70/86 (81%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           LIH+D+CD K +QTRGG KYFITFIDDCT+YCYVYLLKSKDEAL  F  YKNEVENQL+R
Sbjct: 519 LIHSDICDFKSIQTRGGNKYFITFIDDCTKYCYVYLLKSKDEALDKFILYKNEVENQLNR 578

Query: 182 RIKIIRSDRGGEYGAPFDEFCSDSSI 259
           +IK +RSDRGGEY  PF   C  S I
Sbjct: 579 KIKELRSDRGGEYVVPFMSLCEQSGI 604


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  133 bits (335), Expect = 2e-34
 Identities = 59/86 (68%), Positives = 72/86 (83%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           LIH+D+CDLK VQTRGG KYFITF+DD T+YCYVYLLKSKDEA+  F  YK EVENQL++
Sbjct: 530 LIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNK 589

Query: 182 RIKIIRSDRGGEYGAPFDEFCSDSSI 259
           +IK++RSDRGGEY +PF + C+   I
Sbjct: 590 KIKVLRSDRGGEYESPFVDICAQHGI 615


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  133 bits (335), Expect = 2e-34
 Identities = 59/86 (68%), Positives = 72/86 (83%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           LIH+D+CDLK VQTRGG KYFITF+DD T+YCYVYLLKSKDEA+  F  YK EVENQL++
Sbjct: 530 LIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNK 589

Query: 182 RIKIIRSDRGGEYGAPFDEFCSDSSI 259
           +IK++RSDRGGEY +PF + C+   I
Sbjct: 590 KIKVLRSDRGGEYESPFVDICAQHGI 615


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score =  124 bits (312), Expect = 3e-31
 Identities = 57/82 (69%), Positives = 68/82 (82%)
 Frame = +2

Query: 14  DVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSRRIKI 193
           ++CD+K   +RGGKKYFITFIDDCTR+CYVYLL SKDEA+ AFK YKNEVENQL+ +IK+
Sbjct: 541 NICDMKSTPSRGGKKYFITFIDDCTRFCYVYLLNSKDEAIDAFKQYKNEVENQLNLKIKM 600

Query: 194 IRSDRGGEYGAPFDEFCSDSSI 259
           IRSDRGGEY + F E C +  I
Sbjct: 601 IRSDRGGEYESLFAEICLEYGI 622


>gb|AAX96359.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549036|gb|ABA91833.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 709

 Score =  120 bits (301), Expect = 9e-30
 Identities = 56/82 (68%), Positives = 70/82 (85%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           L+H+D+C++  V T+GGKKYF+T IDDCTR+CYVYLLK+KDEAL  FK+YK EVENQL R
Sbjct: 443 LVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKTYKAEVENQLER 502

Query: 182 RIKIIRSDRGGEYGAPFDEFCS 247
           +IK++RSDRGGEY   F+EF S
Sbjct: 503 KIKLLRSDRGGEYF--FNEFAS 522


>gb|EEE65861.1| hypothetical protein OsJ_21651 [Oryza sativa Japonica Group]
          Length = 525

 Score =  119 bits (297), Expect = 2e-29
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           L+H+D+C++  V T+GGKKYF+T IDDCTR CYVYLLK+KDEAL  FK+YK EVENQL R
Sbjct: 283 LVHSDLCEMNGVLTKGGKKYFMTLIDDCTRVCYVYLLKTKDEALHYFKTYKTEVENQLER 342

Query: 182 RIKIIRSDRGGEY-GAPFDEFCSDSSI 259
           +IK +RSDRGGEY    F  FC +  I
Sbjct: 343 KIKRLRSDRGGEYFSNEFTSFCEEFGI 369


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score =  119 bits (298), Expect = 2e-29
 Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           L+H+D+C++  + T+GGK+YF+TFIDD TR+CYVYLLK+KDEA   FK+YK EVENQL R
Sbjct: 506 LVHSDLCEMNGILTKGGKRYFLTFIDDSTRFCYVYLLKTKDEAFNYFKAYKAEVENQLER 565

Query: 182 RIKIIRSDRGGEY-GAPFDEFCSDSSI 259
           +IK +RSDRGGEY    FDEFC +  I
Sbjct: 566 KIKRLRSDRGGEYFSNVFDEFCVEHGI 592


>gb|EEE58211.1| hypothetical protein OsJ_09170 [Oryza sativa Japonica Group]
          Length = 409

 Score =  117 bits (292), Expect = 3e-29
 Identities = 55/87 (63%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           L+H+D+C++  + T+GGKKYF+T IDDCTR+CYVYLLK+KDEAL  FK YK EVENQL R
Sbjct: 283 LVHSDLCEMNGLLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLER 342

Query: 182 RIKIIRSDRGGEY-GAPFDEFCSDSSI 259
           +IK +RSDRGGEY    F  FC +  I
Sbjct: 343 KIKRLRSDRGGEYFSNEFASFCEEFGI 369


>gb|ABA97586.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 786

 Score =  118 bits (296), Expect = 4e-29
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           L+H+D+C++  V T+GGKKYF+T IDDCTR+CYVYLLK+KDEAL  FK YK EVENQL R
Sbjct: 41  LVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLER 100

Query: 182 RIKIIRSDRGGEY-GAPFDEFCSDSSI 259
           +IK +RSDRGGEY    F  FC +  I
Sbjct: 101 KIKRLRSDRGGEYFSNEFTSFCEEYGI 127


>gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1022

 Score =  118 bits (296), Expect = 4e-29
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           L+H+D+C++  V T+GGKKYF+T IDDCTR+CYVYLLK+KDEAL  FK YK EVENQL R
Sbjct: 522 LVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLER 581

Query: 182 RIKIIRSDRGGEY-GAPFDEFCSDSSI 259
           +IK +RSDRGGEY    F  FC +  I
Sbjct: 582 KIKRLRSDRGGEYFSNEFTSFCEEYGI 608


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  118 bits (296), Expect = 4e-29
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           L+H+D+C++  V T+GGKKYF+T IDDCTR+CYVYLLK+KDEAL  FK YK EVENQL R
Sbjct: 457 LVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLER 516

Query: 182 RIKIIRSDRGGEY-GAPFDEFCSDSSI 259
           +IK +RSDRGGEY    F  FC +  I
Sbjct: 517 KIKRLRSDRGGEYFSNEFTSFCEEYGI 543


>gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1363

 Score =  118 bits (296), Expect = 4e-29
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           L+H+D+C++  V T+GGKKYF+T IDDCTR+CYVYLLK+KDEAL  FK YK EVENQL R
Sbjct: 642 LVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLER 701

Query: 182 RIKIIRSDRGGEY-GAPFDEFCSDSSI 259
           +IK +RSDRGGEY    F  FC +  I
Sbjct: 702 KIKRLRSDRGGEYFSNEFTSFCEEYGI 728


>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1408

 Score =  118 bits (296), Expect = 4e-29
 Identities = 57/87 (65%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           LIH+D+C++  V T+GGKKYF+T IDDCTR+CYVYLLK+KDEAL  FK YK EVENQL R
Sbjct: 597 LIHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLER 656

Query: 182 RIKIIRSDRGGEY-GAPFDEFCSDSSI 259
           +IK +RSDRGGEY    F  FC +  I
Sbjct: 657 KIKRLRSDRGGEYFSNEFASFCEEFGI 683


>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1479

 Score =  118 bits (296), Expect = 4e-29
 Identities = 57/87 (65%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           LIH+D+C++  V T+GGKKYF+T IDDCTR+CYVYLLK+KDEAL  FK YK EVENQL R
Sbjct: 668 LIHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLER 727

Query: 182 RIKIIRSDRGGEY-GAPFDEFCSDSSI 259
           +IK +RSDRGGEY    F  FC +  I
Sbjct: 728 KIKRLRSDRGGEYFSNEFASFCEEFGI 754


>gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1186

 Score =  118 bits (295), Expect = 6e-29
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           L+H+D+C++  V T+GGKKYF+T IDDCTR+CYVYLLK+KDEAL  FK YK EVENQL R
Sbjct: 633 LVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLER 692

Query: 182 RIKIIRSDRGGEY-GAPFDEFCSDSSI 259
           +IK +RSDRGGEY    F  FC +  I
Sbjct: 693 KIKRLRSDRGGEYFSNEFASFCEEFGI 719


>gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108708705|gb|ABF96500.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1240

 Score =  118 bits (295), Expect = 6e-29
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   LIHTDVCDLKLVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEALVAFKSYKNEVENQLSR 181
           L+H+D+C++  V T+GGKKYF+T IDDCTR+CYVYLLK+KDEAL  FK YK EVENQL R
Sbjct: 457 LVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLER 516

Query: 182 RIKIIRSDRGGEY-GAPFDEFCSDSSI 259
           +IK +RSDRGGEY    F  FC +  I
Sbjct: 517 KIKRLRSDRGGEYFSNEFASFCEEFGI 543