BLASTX nr result
ID: Rehmannia28_contig00037961
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00037961
(314 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP56105.1| Copia protein [Cajanus cajan] 94 1e-20
gb|KYP55105.1| Copia protein [Cajanus cajan] 94 2e-20
gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposo... 94 2e-20
gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposo... 94 2e-20
gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposo... 94 2e-20
gb|KYP57245.1| Copia protein, partial [Cajanus cajan] 92 1e-19
gb|KYP68966.1| Copia protein, partial [Cajanus cajan] 90 4e-19
ref|XP_014631589.1| PREDICTED: uncharacterized mitochondrial pro... 87 2e-18
ref|XP_014506321.1| PREDICTED: uncharacterized mitochondrial pro... 87 4e-18
gb|KYP44162.1| Copia protein [Cajanus cajan] 81 2e-17
ref|XP_014627063.1| PREDICTED: uncharacterized mitochondrial pro... 85 2e-17
emb|CAN80699.1| hypothetical protein VITISV_000889 [Vitis vinifera] 83 4e-17
emb|CAN69531.1| hypothetical protein VITISV_009937 [Vitis vinifera] 84 8e-17
ref|XP_014504368.1| PREDICTED: uncharacterized mitochondrial pro... 83 9e-17
gb|KYP55915.1| Retrovirus-related Pol polyprotein from transposo... 84 1e-16
gb|KYP55908.1| Retrovirus-related Pol polyprotein from transposo... 84 1e-16
gb|KYP45519.1| Copia protein [Cajanus cajan] 80 1e-16
gb|KYP55882.1| Copia protein, partial [Cajanus cajan] 83 1e-16
gb|ABM55238.1| integrase [Beta vulgaris] 83 1e-16
gb|ABH08430.1| putative integrase [Beta vulgaris] 83 1e-16
>gb|KYP56105.1| Copia protein [Cajanus cajan]
Length = 379
Score = 94.0 bits (232), Expect = 1e-20
Identities = 57/98 (58%), Positives = 65/98 (66%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNGFIQEEVYV+QPPGF+ PN VF KKALYG + L+ +FTRG
Sbjct: 7 FLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALYGLKQAPRAWYERLSKFLLEKEFTRG 66
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVDTTLF+ K D LLV IY + IFGATN+YLCK F
Sbjct: 67 KVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLCKEF 104
>gb|KYP55105.1| Copia protein [Cajanus cajan]
Length = 495
Score = 94.0 bits (232), Expect = 2e-20
Identities = 57/98 (58%), Positives = 65/98 (66%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNGFIQEEVYV+QPPGF+ PN VF KKALYG + L+ +FTRG
Sbjct: 98 FLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALYGLKQAPRAWYERLSKFLLEKEFTRG 157
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVDTTLF+ K D LLV IY + IFGATN+YLCK F
Sbjct: 158 KVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLCKEF 195
>gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 900
Score = 94.0 bits (232), Expect = 2e-20
Identities = 57/98 (58%), Positives = 65/98 (66%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNGFIQEEVYV+QPPGF+ PN VF KKALYG + L+ +FTRG
Sbjct: 503 FLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALYGLKQAPRAWYERLSKFLLEKEFTRG 562
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVDTTLF+ K D LLV IY + IFGATN+YLCK F
Sbjct: 563 KVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLCKEF 600
>gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1011
Score = 94.0 bits (232), Expect = 2e-20
Identities = 57/98 (58%), Positives = 65/98 (66%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNGFIQEEVYV+QPPGF+ PN VF KKALYG + L+ +FTRG
Sbjct: 614 FLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALYGLKQAPRAWYERLSKFLLEKEFTRG 673
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVDTTLF+ K D LLV IY + IFGATN+YLCK F
Sbjct: 674 KVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLCKEF 711
>gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1021
Score = 94.0 bits (232), Expect = 2e-20
Identities = 57/98 (58%), Positives = 65/98 (66%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNGFIQEEVYV+QPPGF+ PN VF KKALYG + L+ +FTRG
Sbjct: 624 FLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALYGLKQAPRAWYERLSKFLLEKEFTRG 683
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVDTTLF+ K D LLV IY + IFGATN+YLCK F
Sbjct: 684 KVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLCKEF 721
>gb|KYP57245.1| Copia protein, partial [Cajanus cajan]
Length = 605
Score = 92.0 bits (227), Expect = 1e-19
Identities = 56/98 (57%), Positives = 64/98 (65%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNGFIQEEVYV+QPPGF+ PN VF KK LYG + L+ +FTRG
Sbjct: 483 FLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKVLYGLKQAPRAWYERLSKFLLKKEFTRG 542
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVDTTLF+ K D LLV IY + IFGATN+YLCK F
Sbjct: 543 KVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLCKEF 580
>gb|KYP68966.1| Copia protein, partial [Cajanus cajan]
Length = 475
Score = 90.1 bits (222), Expect = 4e-19
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNGFIQEEV+V+QPPGF+ PN VF K+ LYG + L+ +FTRG
Sbjct: 78 FLNGFIQEEVFVEQPPGFENSELPNHVFKLKRTLYGLKQAPRAWYERLSKFILEKEFTRG 137
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVDTTLF+ K D LLV IY + IFGATN+YLCK F
Sbjct: 138 KVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLCKEF 175
>ref|XP_014631589.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like,
partial [Glycine max]
Length = 368
Score = 87.4 bits (215), Expect = 2e-18
Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 13/99 (13%)
Frame = +3
Query: 3 NFLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTR 149
+FLNG IQEEVYV+QPPGF+I +PN V+ +KALYG + L+ +F+R
Sbjct: 104 DFLNGLIQEEVYVEQPPGFEIPDKPNHVYKLQKALYGLKQAPRAWYERLSNFLLEKEFSR 163
Query: 150 GKVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
GKVDTTLF+ K D LLV IY + IFG+TN+ LCK F
Sbjct: 164 GKVDTTLFIKRKHNDILLVQIYVDDIIFGSTNDSLCKEF 202
>ref|XP_014506321.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like,
partial [Vigna radiata var. radiata]
Length = 348
Score = 86.7 bits (213), Expect = 4e-18
Identities = 50/101 (49%), Positives = 67/101 (66%), Gaps = 13/101 (12%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRP-NVFF*KKALYG----------**T*LFLQNDFTRG 152
FLNGFI+EEVYV QPPGF+ F P +VF KKALYG T + NDF+RG
Sbjct: 7 FLNGFIKEEVYVSQPPGFEDFKYPDHVFKLKKALYGLKQAPRSWYERLTIFLIDNDFSRG 66
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIFFQV 269
KVD+TLF+ + G+ L+V +Y + IFG+TN+ LC+ F ++
Sbjct: 67 KVDSTLFIKKVGKHMLIVQVYVDDIIFGSTNDSLCEEFAKI 107
>gb|KYP44162.1| Copia protein [Cajanus cajan]
Length = 142
Score = 80.9 bits (198), Expect = 2e-17
Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 13/99 (13%)
Frame = +3
Query: 3 NFLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTR 149
+FLNG IQEEVYV+QPPGF F PN V+ KKALYG + ++ND+ R
Sbjct: 6 DFLNGLIQEEVYVEQPPGFVDFKNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYER 65
Query: 150 GKVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
GKVD TLFV + D + V IY + +FG+TN LCK F
Sbjct: 66 GKVDNTLFVKKFKNDTMYVQIYVDDIVFGSTNTSLCKEF 104
>ref|XP_014627063.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like,
partial [Glycine max]
Length = 438
Score = 85.1 bits (209), Expect = 2e-17
Identities = 51/98 (52%), Positives = 65/98 (66%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNG IQEEVYV+QPPGF+I +PN V+ +KALYG + L+ +F+RG
Sbjct: 4 FLNGLIQEEVYVEQPPGFEIPDKPNHVYKLQKALYGLKQAPRAWYERLSNFLLEKEFSRG 63
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVDTTLF+ K + LLV IY + IFG+TN+ LCK F
Sbjct: 64 KVDTTLFIKRKHNNILLVQIYVDDIIFGSTNDSLCKEF 101
>emb|CAN80699.1| hypothetical protein VITISV_000889 [Vitis vinifera]
Length = 301
Score = 83.2 bits (204), Expect = 4e-17
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNGFI EEVYV+QPPGF+ F+ PN VF KKALYG + L+ F G
Sbjct: 7 FLNGFINEEVYVEQPPGFQSFNFPNHVFRLKKALYGLKQAPRAWYERLSKFLLKKGFKMG 66
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
K+DTTLF+ K D LLV IY + IFGATN LC+ F
Sbjct: 67 KIDTTLFIKTKDNDMLLVQIYVDDIIFGATNVSLCEEF 104
>emb|CAN69531.1| hypothetical protein VITISV_009937 [Vitis vinifera]
Length = 426
Score = 83.6 bits (205), Expect = 8e-17
Identities = 52/96 (54%), Positives = 60/96 (62%), Gaps = 13/96 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNGFI EEVYV+QPPGF+ F+ PN VF KKALYG + L+ F G
Sbjct: 63 FLNGFINEEVYVEQPPGFQSFNFPNHVFKLKKALYGLKQAPRAWYERLSKFLLKKGFKMG 122
Query: 153 KVDTTLFVFEKGQDCLLVHIYEN--IFGATNEYLCK 254
K+DTTLF+ K D LLV IY N IFGATN LC+
Sbjct: 123 KIDTTLFIKTKENDMLLVQIYVNDIIFGATNVSLCE 158
>ref|XP_014504368.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like,
partial [Vigna radiata var. radiata]
Length = 345
Score = 82.8 bits (203), Expect = 9e-17
Identities = 47/101 (46%), Positives = 68/101 (67%), Gaps = 13/101 (12%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNGFI+EEVYV QPPGF+ F P+ V+ KKALYG + ++N+F+RG
Sbjct: 4 FLNGFIKEEVYVSQPPGFEDFKFPDYVYKLKKALYGLKQAPRSWYERLSTFLIENEFSRG 63
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIFFQV 269
KVD+TLF+ + G+ L+V +Y + IFG+TN+ LC+ F ++
Sbjct: 64 KVDSTLFIKKVGKHILIVQVYVDDIIFGSTNDSLCEEFAKI 104
>gb|KYP55915.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 751
Score = 83.6 bits (205), Expect = 1e-16
Identities = 50/98 (51%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNG IQEEVYV+QPPGF F PN V+ KKALYG + ++ND+ RG
Sbjct: 614 FLNGLIQEEVYVEQPPGFVDFKYPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYVRG 673
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVD TLFV + D + V IY + +FG+TN YLCK F
Sbjct: 674 KVDNTLFVKKFKTDTMYVQIYVDDIVFGSTNSYLCKEF 711
>gb|KYP55908.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 762
Score = 83.6 bits (205), Expect = 1e-16
Identities = 50/98 (51%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNG IQEEVYV+QPPGF F PN V+ KKALYG + ++ND+ RG
Sbjct: 625 FLNGLIQEEVYVEQPPGFVDFKYPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYVRG 684
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVD TLFV + D + V IY + +FG+TN YLCK F
Sbjct: 685 KVDNTLFVKKFKTDTMYVQIYVDDIVFGSTNSYLCKEF 722
>gb|KYP45519.1| Copia protein [Cajanus cajan]
Length = 203
Score = 80.5 bits (197), Expect = 1e-16
Identities = 49/98 (50%), Positives = 60/98 (61%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG----------**T*LFLQNDFTRG 152
FLNG IQEEVYV+QPPGF F PN V+ KKALYG + ++ND+ RG
Sbjct: 100 FLNGLIQEEVYVEQPPGFVDFKNPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYVRG 159
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVD TLFV + D + V IY + +FG+TN LCK F
Sbjct: 160 KVDNTLFVKKFKNDTMYVQIYVDDIVFGSTNVSLCKEF 197
>gb|KYP55882.1| Copia protein, partial [Cajanus cajan]
Length = 902
Score = 83.2 bits (204), Expect = 1e-16
Identities = 55/98 (56%), Positives = 63/98 (64%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG**----------T*LFLQNDFTRG 152
FLNGFIQE VYV+QPP F+ PN VF KKALYG + L+ +FTRG
Sbjct: 617 FLNGFIQE-VYVEQPPEFENSEFPNHVFKLKKALYGLKQAPRAWYERLSKFLLEKEFTRG 675
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVDTTLF+ K D LLV IY + IFGATN+YLCK F
Sbjct: 676 KVDTTLFIKIKMNDILLVQIYVDDIIFGATNDYLCKEF 713
>gb|ABM55238.1| integrase [Beta vulgaris]
Length = 1516
Score = 83.2 bits (204), Expect = 1e-16
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG**----------T*LFLQNDFTRG 152
FLNG++ E+VYV+QPPGF+ + PN V+ KALYG + L+N+F RG
Sbjct: 1123 FLNGYLNEDVYVEQPPGFENNNLPNHVYKLDKALYGLKQAPRSWYERLSKFLLENNFKRG 1182
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVD TLF+ KG D LLV IY + IFGATNE LCK F
Sbjct: 1183 KVDKTLFLKSKGTDILLVQIYVDDIIFGATNETLCKEF 1220
>gb|ABH08430.1| putative integrase [Beta vulgaris]
Length = 1516
Score = 83.2 bits (204), Expect = 1e-16
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 13/98 (13%)
Frame = +3
Query: 6 FLNGFIQEEVYVKQPPGFKIFSRPN-VFF*KKALYG**----------T*LFLQNDFTRG 152
FLNG++ E+VYV+QPPGF+ + PN V+ KALYG + L+N+F RG
Sbjct: 1123 FLNGYLNEDVYVEQPPGFENNNLPNHVYKLDKALYGLKQAPRSWYERLSKFLLENNFKRG 1182
Query: 153 KVDTTLFVFEKGQDCLLVHIY--ENIFGATNEYLCKIF 260
KVD TLF+ KG D LLV IY + IFGATNE LCK F
Sbjct: 1183 KVDKTLFLKSKGTDILLVQIYVDDIIFGATNETLCKEF 1220