BLASTX nr result

ID: Rehmannia28_contig00037887 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00037887
         (420 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006376430.1| hypothetical protein POPTR_0013s12970g [Popu...    60   7e-09
emb|CBI27418.3| unnamed protein product [Vitis vinifera]               55   4e-07

>ref|XP_006376430.1| hypothetical protein POPTR_0013s12970g [Populus trichocarpa]
           gi|118481694|gb|ABK92787.1| unknown [Populus
           trichocarpa] gi|118489319|gb|ABK96464.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|550325706|gb|ERP54227.1| hypothetical protein
           POPTR_0013s12970g [Populus trichocarpa]
          Length = 126

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = -1

Query: 417 AIVVLTSATAVFLPLLRPTG-GGEAAPEVFYGGLPSNYHSFVVSIMFAFSCALSAMFLDR 241
           +I+++T  T +FL LL      G   P V + G PS +H+FV+S++FAF+ +  ++ +D+
Sbjct: 22  SILIITFTTGMFLNLLPQENIDGNPVPTVIFKGHPSIFHAFVISVVFAFTGSFCSLMIDK 81

Query: 240 KPQAARVFRFCAILWMSFGIILLVHAIF 157
           KP+ +R F + +++ M+     +V  +F
Sbjct: 82  KPKVSRFFAYLSVISMASVFSTVVFPLF 109


>emb|CBI27418.3| unnamed protein product [Vitis vinifera]
          Length = 133

 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
 Frame = -1

Query: 417 AIVVLTSATAVFLPLLRPTGGGEA--APEVFYGGLPSNYHSFVVSIMFAFSCALSAMFL- 247
           AI+ ++ ATA  L  L P    E+   P V + GLPS +H+FV+S++FAF+ A   + + 
Sbjct: 39  AILFISFATANILVAL-PFEQVESHRVPTVIFKGLPSAFHAFVISLIFAFNGAFCGLMIH 97

Query: 246 DRKPQAARVFRFCAILWMSFGIILLVHAIF 157
           + +P+ AR+F + +I+ M+  I +LV AIF
Sbjct: 98  NYQPKIARIFSYHSIVSMASSICILVFAIF 127


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