BLASTX nr result
ID: Rehmannia28_contig00037881
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00037881
(314 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP44025.1| Retrovirus-related Pol polyprotein from transposo... 91 1e-19
gb|AAR96002.1| retrotransposon-like protein [Musa acuminata] 90 5e-19
gb|KYP33202.1| Retrovirus-related Pol polyprotein from transposo... 86 2e-18
emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera] 86 2e-17
gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposo... 85 3e-17
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 85 3e-17
gb|KYP59969.1| Retrovirus-related Pol polyprotein from transposo... 84 5e-17
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo... 84 7e-17
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo... 84 7e-17
emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera] 83 1e-16
gb|KYP54197.1| Retrovirus-related Pol polyprotein from transposo... 83 2e-16
gb|KYP69858.1| Retrovirus-related Pol polyprotein from transposo... 82 2e-16
gb|KYP73265.1| Retrovirus-related Pol polyprotein from transposo... 83 2e-16
emb|CAN69994.1| hypothetical protein VITISV_018606 [Vitis vinifera] 82 2e-16
gb|KYP65439.1| Retrovirus-related Pol polyprotein from transposo... 79 3e-16
gb|KYP49409.1| Retrovirus-related Pol polyprotein from transposo... 78 4e-16
gb|KYP31800.1| Retrovirus-related Pol polyprotein from transposo... 79 5e-16
gb|KYP52472.1| Retrovirus-related Pol polyprotein from transposo... 77 3e-15
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 78 1e-14
gb|KYP42630.1| Retrovirus-related Pol polyprotein from transposo... 77 2e-14
>gb|KYP44025.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 331
Score = 90.5 bits (223), Expect = 1e-19
Identities = 56/125 (44%), Positives = 72/125 (57%), Gaps = 21/125 (16%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS----DSNQYVP 168
T+ CIF+GYG +EFGYR +DPV+KK++RSRDV F+EDQTIED ++EK+ D N
Sbjct: 84 TRQCIFIGYGEDEFGYRFYDPVEKKLVRSRDVQFMEDQTIEDIDKVEKTTPEKDRNLTDV 143
Query: 169 DDVDPVSSPRNQNH-------GGGV-------QEQH---HDTTGDXXXXXXXEDAARRST 297
D+VD P Q+ GGG+ QE+H HD D + RRS
Sbjct: 144 DNVDGSVQPGEQHDDVDDQQLGGGLDVHIDDDQEEHEMSHDENID-DAPEPRQVQLRRSN 202
Query: 298 RQRQP 312
RQRQP
Sbjct: 203 RQRQP 207
>gb|AAR96002.1| retrotransposon-like protein [Musa acuminata]
Length = 521
Score = 90.1 bits (222), Expect = 5e-19
Identities = 54/115 (46%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Frame = +1
Query: 4 KSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKSDSNQYVPDDVDP 183
K+CIFLGYGHEEFGYRLWDPV KK+IRSRDVVFLEDQ +D V DD
Sbjct: 398 KACIFLGYGHEEFGYRLWDPVNKKIIRSRDVVFLEDQLFDD------------VYDD--- 442
Query: 184 VSSPRNQNHGGGVQEQHHDTTGD------------XXXXXXXEDAARRSTRQRQP 312
HGG QE H + D E RRSTR+RQP
Sbjct: 443 --------HGGDEQEDHGENVSDDTPTVDDIEPTEQAPPSPVEIPLRRSTRERQP 489
>gb|KYP33202.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 269
Score = 86.3 bits (212), Expect = 2e-18
Identities = 55/135 (40%), Positives = 72/135 (53%), Gaps = 31/135 (22%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEK-SDSNQYVPDDV 177
T+ CIF+GYG +EFGYR +DPV+KK+++SRDV F+EDQTIED ++EK + N DV
Sbjct: 84 TRQCIFIGYGEDEFGYRFYDPVEKKLVKSRDVQFMEDQTIEDIDKVEKTTPENDRNLTDV 143
Query: 178 DPVSSP--------------------RNQNHGGGV-------QEQH---HDTTGDXXXXX 267
DP+ P +Q GGG+ QE+H HD D
Sbjct: 144 DPMWFPIHNLDNVDGSVQPSEQHDDVDDQQLGGGLDVPIDDDQEEHEMSHDENTD-DAPE 202
Query: 268 XXEDAARRSTRQRQP 312
+ RRS RQRQP
Sbjct: 203 PHQVQLRRSNRQRQP 217
>emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]
Length = 761
Score = 85.5 bits (210), Expect = 2e-17
Identities = 46/83 (55%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKSDSNQYVPDDVD 180
TKSCIFLGY +EEFGYRLWD KK+IRSRDVV EDQTIED ++K D+
Sbjct: 463 TKSCIFLGYSNEEFGYRLWDLATKKIIRSRDVVIFEDQTIEDLDWVKKPKPFSEEQXDLG 522
Query: 181 PVS--SPRNQNHGGGVQEQHHDT 243
PVS S + H VQE+ DT
Sbjct: 523 PVSPNSMGHDEHREVVQEEQVDT 545
>gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 990
Score = 85.1 bits (209), Expect = 3e-17
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 8/88 (9%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS----DSNQYVP 168
T+ CIF+GYG +EFGYR +DP++KK++RSRDV F+EDQTIED ++EK+ D N
Sbjct: 580 TRQCIFIGYGEDEFGYRFYDPIEKKLVRSRDVQFMEDQTIEDIDKVEKTTPEKDRNL--- 636
Query: 169 DDVDPVSSPRN--QNHGGGVQ--EQHHD 240
DVDP+ P + N G VQ EQH D
Sbjct: 637 TDVDPMRLPIHNLDNVDGSVQPGEQHDD 664
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 85.1 bits (209), Expect = 3e-17
Identities = 55/128 (42%), Positives = 69/128 (53%), Gaps = 24/128 (18%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIED---AKQIEKSDSNQYVPD 171
T+ CIF+GYG +EFGYRL+DPV+KK++RSRDVVF E+QTIED KQ E DS V
Sbjct: 666 TRQCIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDKVKQPESRDSGSLV-- 723
Query: 172 DVDPVSS---------PRNQNHGGGVQEQHHDTT-----GDXXXXXXXE-------DAAR 288
D++PVS N +G V + DT D E D R
Sbjct: 724 DIEPVSRRYTDDVDEVQENVQNGDPVPDYQGDTVDVDGHADDVVHQEQEVPSQVPVDLPR 783
Query: 289 RSTRQRQP 312
RS R+R+P
Sbjct: 784 RSDRERRP 791
>gb|KYP59969.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 345
Score = 83.6 bits (205), Expect = 5e-17
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 8/88 (9%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS----DSNQYVP 168
T+ CIF+GYG +EFGYR +DPV+KK++RSRDV F+EDQTIED ++EK+ D N
Sbjct: 244 TRQCIFIGYGEDEFGYRFYDPVEKKLVRSRDVQFMEDQTIEDIDKVEKTTPEKDRNL--- 300
Query: 169 DDVDPVSSPRN--QNHGGGVQ--EQHHD 240
+VDP+ P + N G VQ EQH D
Sbjct: 301 TNVDPMRLPIHNLDNVDGSVQPGEQHDD 328
>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 84.0 bits (206), Expect = 7e-17
Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 13/117 (11%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKSDSNQYVPDDVD 180
TK CI+L +EFGYRLWDP+ KKV+RSRDVVF EDQTIED K EK + ++
Sbjct: 654 TKECIYLRSPKDEFGYRLWDPINKKVVRSRDVVFFEDQTIEDIKNSEKPRLRK--STELT 711
Query: 181 PVSSPRNQNHGGG-------VQEQHHDTTGDXXXXXXXEDAA------RRSTRQRQP 312
PV N+ H V EQ + T D + ++ RRS+R+R+P
Sbjct: 712 PVQHENNETHQDNDPEEDEPVLEQSNQETHDEPAQEDPQSSSLPAPEPRRSSRERRP 768
>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 84.0 bits (206), Expect = 7e-17
Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 13/117 (11%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKSDSNQYVPDDVD 180
TK CI+L +EFGYRLWDP+ KKV+RSRDVVF EDQTIED K EK + ++
Sbjct: 654 TKECIYLRSPKDEFGYRLWDPINKKVVRSRDVVFFEDQTIEDIKNSEKPRLRK--STELT 711
Query: 181 PVSSPRNQNHGGG-------VQEQHHDTTGDXXXXXXXEDAA------RRSTRQRQP 312
PV N+ H V EQ + T D + ++ RRS+R+R+P
Sbjct: 712 PVQHENNETHQDNDPEEDEPVLEQSNQETHDEPAQEDPQSSSLPAPEPRRSSRERRP 768
>emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera]
Length = 458
Score = 83.2 bits (204), Expect = 1e-16
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKSD--SNQYVPDD 174
TK CIFLGY +EEFGYRLWDP KK+IRSR VVF +DQTIED +++KS S + V
Sbjct: 352 TKQCIFLGYSNEEFGYRLWDPATKKIIRSRYVVFFKDQTIEDLDRVKKSKPFSEEQVDLG 411
Query: 175 VDPVSSPRNQNHGGGVQEQHHDT 243
+ +S + H VQE+ DT
Sbjct: 412 LISRNSMGHNEHKEVVQEEQVDT 434
>gb|KYP54197.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 512
Score = 82.8 bits (203), Expect = 2e-16
Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 8/88 (9%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS----DSNQYVP 168
T+ CI +GYG +EFGYR +DPV+KK++RSRDV F+EDQTIED ++EK+ D N
Sbjct: 324 TRQCILIGYGEDEFGYRFYDPVEKKLVRSRDVQFMEDQTIEDIDKVEKTTPEKDRNL--- 380
Query: 169 DDVDPVSSPRN--QNHGGGVQ--EQHHD 240
D+DP+ P + N G VQ EQH D
Sbjct: 381 TDIDPMRLPIHNLDNVDGSVQPGEQHDD 408
>gb|KYP69858.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 397
Score = 82.4 bits (202), Expect = 2e-16
Identities = 55/131 (41%), Positives = 71/131 (54%), Gaps = 27/131 (20%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS----DSNQYVP 168
T+ CIF+GYG +EFGYR +DPV+KK++RSRDV F+EDQTIED ++EK+ D N
Sbjct: 84 TRQCIFIGYGEDEFGYRFYDPVEKKLVRSRDVQFMEDQTIEDIDKVEKTTPEKDRNL--- 140
Query: 169 DDVDPVSSP-------------RNQNHGGGV-------QEQH---HDTTGDXXXXXXXED 279
DVDP+ P +Q GG+ QE+H HD D +
Sbjct: 141 TDVDPMRLPIHNLDNVDGSVHVDDQQLVGGLDVPIDDDQEEHEMSHDENID-DAPEPHQV 199
Query: 280 AARRSTRQRQP 312
RS RQRQP
Sbjct: 200 QLMRSNRQRQP 210
>gb|KYP73265.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 728
Score = 82.8 bits (203), Expect = 2e-16
Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 8/88 (9%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS----DSNQYVP 168
T+ CIF+GY +EFGYR +DPV+KK++RSRDV F+EDQTIED ++EK+ D N
Sbjct: 640 TRQCIFIGYDEDEFGYRFYDPVEKKLVRSRDVQFMEDQTIEDIDKVEKTTPEKDRNL--- 696
Query: 169 DDVDPVSSPRN--QNHGGGVQ--EQHHD 240
DVDP+ P + N G VQ EQH D
Sbjct: 697 TDVDPMRLPIHNLDNVDGSVQPGEQHDD 724
>emb|CAN69994.1| hypothetical protein VITISV_018606 [Vitis vinifera]
Length = 626
Score = 82.4 bits (202), Expect = 2e-16
Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKSDSNQYVPDDVD 180
TK CIFLGY +EEFGYRLWDP K++I+SRDV+F EDQTI +++K D+
Sbjct: 184 TKQCIFLGYSNEEFGYRLWDPTTKQIIKSRDVIFFEDQTIAKLDRVKKPKPFSEEQVDLG 243
Query: 181 PVS--SPRNQNHGGGVQEQHHDT 243
PVS S + H VQE+ DT
Sbjct: 244 PVSPNSMGHNEHREVVQEEQVDT 266
>gb|KYP65439.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 185
Score = 79.0 bits (193), Expect = 3e-16
Identities = 45/88 (51%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS----DSNQYVP 168
T+ CIF+GYG +EFGYR +DPV+KK++RSRDV F+E QTIED ++EK+ D N
Sbjct: 84 TRQCIFIGYGEDEFGYRFYDPVEKKLVRSRDVQFMEAQTIEDIDKVEKTTPEKDRNL--- 140
Query: 169 DDVDPVS--SPRNQNHGGGVQ--EQHHD 240
DVDP+ N G VQ EQH D
Sbjct: 141 TDVDPMRLLIHNMDNVDGSVQPGEQHDD 168
>gb|KYP49409.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 166
Score = 78.2 bits (191), Expect = 4e-16
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 4/69 (5%)
Frame = +1
Query: 10 CIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS----DSNQYVPDDV 177
CIF+GYG +E GYRL+DPV+KK++RSRDV F+EDQTIED ++EKS D N DV
Sbjct: 92 CIFIGYGQDELGYRLYDPVEKKLVRSRDVQFMEDQTIEDIDKMEKSTPKEDGN---VADV 148
Query: 178 DPVSSPRNQ 204
DP+ N+
Sbjct: 149 DPIRLSANE 157
>gb|KYP31800.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 241
Score = 79.3 bits (194), Expect = 5e-16
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 14/94 (14%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS----DSN---- 156
T+ CIF+GYG +EFGYRL+DPV+KK++RS DV F+EDQTIED ++EK+ D+N
Sbjct: 84 TRQCIFIGYGQDEFGYRLYDPVEKKLVRSPDVQFMEDQTIEDINKVEKTTPKKDNNLTDG 143
Query: 157 --QYVP----DDVDPVSSPRNQNHGGGVQEQHHD 240
+P D+V+ +P ++ HG +Q+ D
Sbjct: 144 NPMRLPVHNLDNVE-TDAPNDEQHGDVDDQQNRD 176
>gb|KYP52472.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 211
Score = 76.6 bits (187), Expect = 3e-15
Identities = 31/49 (63%), Positives = 42/49 (85%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS 147
T+ CIF+GYGH EFGY L+DP++KK++RS DV F+EDQTIED ++EK+
Sbjct: 84 TRQCIFIGYGHNEFGYMLYDPIEKKLVRSCDVQFMEDQTIEDINKVEKT 132
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 77.8 bits (190), Expect = 1e-14
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS--DSNQYVPDD 174
T+ C+F+GYG + GY+ +DPV+KK++RSRDVVF+EDQTIED ++EKS DS ++ +
Sbjct: 668 TRECVFIGYGQDMLGYKFYDPVEKKLVRSRDVVFVEDQTIEDIDKVEKSTDDSAEF---E 724
Query: 175 VDPVSSPRNQNHGGGVQEQHHDTTG 249
+ P PR G VQ+ + G
Sbjct: 725 LPPTVVPRQV--GDDVQDNQPEAPG 747
>gb|KYP42630.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 701
Score = 77.0 bits (188), Expect = 2e-14
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 14/94 (14%)
Frame = +1
Query: 1 TKSCIFLGYGHEEFGYRLWDPVKKKVIRSRDVVFLEDQTIEDAKQIEKS----DSN---- 156
T+ CIF+GYG +EFGYRL+DPV+KK++RS DV +EDQTIED ++EK+ D+N
Sbjct: 84 TRQCIFIGYGQDEFGYRLYDPVEKKLVRSHDVQLMEDQTIEDINKVEKTTPKKDNNLTDG 143
Query: 157 --QYVP----DDVDPVSSPRNQNHGGGVQEQHHD 240
+P D+V+ +P ++ HG +Q+ D
Sbjct: 144 NPMRLPIHNLDNVE-TDAPNDEQHGDVDDQQNGD 176