BLASTX nr result

ID: Rehmannia28_contig00037631 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00037631
         (734 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                45   4e-07
ref|XP_013448488.1| DUF223 domain protein [Medicago truncatula] ...    42   8e-06

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 44.7 bits (104), Expect(2) = 4e-07
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = +3

Query: 246 DCRNNRMTCTLWEDYVDTILPYLEEHSLEPIVIILQMCRAKV 371
           D    ++ CT+W+D+V  + P+ +    +P++I+LQ CR KV
Sbjct: 171 DTEGTQIKCTVWDDHVSKLEPFYQSTKQDPVIILLQFCRVKV 212



 Score = 37.4 bits (85), Expect(2) = 4e-07
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +2

Query: 77  LTDITGRVVSMQSVQTKHFAGKTTRFIDIILEDLE 181
           L D+ G VV + + Q K  AGK TR ID +LED E
Sbjct: 139 LIDLIGMVVEINTPQDKVIAGKATRLIDFLLEDTE 173


>ref|XP_013448488.1| DUF223 domain protein [Medicago truncatula]
           gi|124359862|gb|ABD32456.2| Nucleic acid-binding,
           OB-fold [Medicago truncatula]
           gi|657377641|gb|KEH22515.1| DUF223 domain protein
           [Medicago truncatula]
          Length = 327

 Score = 41.6 bits (96), Expect(3) = 8e-06
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 246 DCRNNRMTCTLWEDYVDTILPYLEEHSLE-PIVIILQMCRAKV 371
           D  NNR+ C+LW ++VD I+ +   H  + P ++ILQ C+ ++
Sbjct: 170 DLENNRLHCSLWGEHVDKIVTFFGNHDNDTPTILILQFCKTRM 212



 Score = 32.7 bits (73), Expect(3) = 8e-06
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +2

Query: 47  QILYLSLF*ILTDITGRVVSMQSVQTKHFAGKTTRFIDIILEDLE*N 187
           +IL  ++  + TD+ G V+   +++     G+ +R ID+ LEDLE N
Sbjct: 128 EILSSTVEEVYTDVIGHVIERGNIRETEKDGRKSRVIDLTLEDLENN 174



 Score = 22.3 bits (46), Expect(3) = 8e-06
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = +1

Query: 478 MSNSFHVTKLIVNGE 522
           ++N+F+ TKLI+NG+
Sbjct: 219 VANAFNGTKLILNGD 233