BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00037508
         (904 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010269649.1| PREDICTED: uncharacterized protein LOC104606...   265   7e-84
gb|AIC77183.1| polyprotein [Gossypium barbadense]                     177   1e-81
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         169   2e-81
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   166   1e-80
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   166   2e-80
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   167   2e-80
ref|XP_010910497.1| PREDICTED: uncharacterized protein LOC105036...   254   1e-79
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   166   1e-79
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo...   163   1e-78
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo...   163   1e-78
gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposo...   163   1e-78
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo...   162   5e-78
gb|KYP32069.1| Retrovirus-related Pol polyprotein from transposo...   159   3e-77
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]   155   2e-74
gb|KYP57183.1| Retrovirus-related Pol polyprotein from transposo...   157   3e-74
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]   155   4e-73
gb|KYP46330.1| Retrovirus-related Pol polyprotein from transposo...   156   3e-72
gb|KYP48234.1| Retrovirus-related Pol polyprotein from transposo...   156   4e-72
gb|KYP39567.1| Retrovirus-related Pol polyprotein from transposo...   165   5e-72
gb|KYP68042.1| Retrovirus-related Pol polyprotein from transposo...   153   7e-72

>ref|XP_010269649.1| PREDICTED: uncharacterized protein LOC104606252 [Nelumbo nucifera]
          Length = 361

 Score =  265 bits (677), Expect = 7e-84
 Identities = 122/168 (72%), Positives = 142/168 (84%)
 Frame = -1

Query: 904 RGRGRYDKSNIDCYSCHRHGHYASECRYKDDTQRAHCVQGDDNNEFEDSGHALLMATTTN 725
           RGRGRYDKSN++CYSCHRHGHY+S CRYKD+TQRAH VQ DD+++ +D  H LLM T T+
Sbjct: 189 RGRGRYDKSNVECYSCHRHGHYSSLCRYKDNTQRAHYVQEDDDDD-DDGDHTLLMVTATS 247

Query: 724 ETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINLKNGD 545
           ET +YHTWFLDT CTNHMC KKELF DLDE+FRT +KF D+ TI + GKG ILINLKNGD
Sbjct: 248 ETPNYHTWFLDTRCTNHMCDKKELFADLDESFRTKIKFADDSTISMMGKGHILINLKNGD 307

Query: 544 HRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKKVHLSS 401
           H+YISDVF+VP MKSNLLS+GQL EKGYVMN++ NQLSI DKK +  S
Sbjct: 308 HKYISDVFYVPGMKSNLLSVGQLAEKGYVMNLHGNQLSILDKKRYTHS 355


>gb|AIC77183.1| polyprotein [Gossypium barbadense]
          Length = 1369

 Score =  177 bits (450), Expect(2) = 1e-81
 Identities = 76/139 (54%), Positives = 107/139 (76%), Gaps = 1/139 (0%)
 Frame = -3

Query: 416 GTLILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMVK 237
           G L+++  +++NR+F +DI  G  KC++  + +ESWLWHLR+GHL F  LK+L+K NMV 
Sbjct: 448 GELVVRVDMTRNRLFTLDIESGEVKCMKTDLKNESWLWHLRYGHLGFSGLKLLSKTNMVN 507

Query: 236 GLPNIHHPEQLCEYCILGKSHRLPF-VGEQRRTKHPLELIHSDVCGPMNILTNGGNRYFL 60
           GLP+I+HP+QLCE C+ GK HR  F VG+ RR + PLE++H+D+ GP +I + GGNRY+L
Sbjct: 508 GLPSINHPDQLCEACVKGKQHRQKFEVGKSRRARRPLEIVHTDISGPYDIESLGGNRYYL 567

Query: 59  TFIDDFTRKIWVYLLQKKS 3
           TFIDD++RK WVY L+ KS
Sbjct: 568 TFIDDYSRKCWVYFLKAKS 586



 Score =  154 bits (389), Expect(2) = 1e-81
 Identities = 74/170 (43%), Positives = 111/170 (65%), Gaps = 4/170 (2%)
 Frame = -1

Query: 904 RGRGRY--DKSNIDCYSCHRHGHYASECR--YKDDTQRAHCVQGDDNNEFEDSGHALLMA 737
           RGRGR+  +KS + CY+C+++GH++ ECR  +K D +    V  + N + E S   + + 
Sbjct: 284 RGRGRFQENKSQVQCYNCNKYGHFSYECRSTHKVDERNHVAVAAEGNEKVESS---VFLT 340

Query: 736 TTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINL 557
              NE      W+LD G +NHMCG+KELFT+LDET    + FGD     + GKG+++I  
Sbjct: 341 YGENEDRKRSVWYLDNGASNHMCGRKELFTELDETVHGQITFGDNSHAEIKGKGKVVITQ 400

Query: 556 KNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKKVHL 407
           +NG+ +YISDV++VP +KSNL+S+GQL EKGY +++ D  L+I +K   L
Sbjct: 401 RNGEKKYISDVYYVPALKSNLISLGQLLEKGYEVHMKDRSLAIRNKSGEL 450


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  169 bits (428), Expect(2) = 2e-81
 Identities = 82/175 (46%), Positives = 119/175 (68%), Gaps = 9/175 (5%)
 Frame = -1

Query: 904 RGRG------RYDKSNIDCYSCHRHGHYASECRY---KDDTQRAHCVQGDDNNEFEDSGH 752
           RGRG      RYDKS++ CY+C + GHYASEC+    K   ++AH V+     + ++   
Sbjct: 263 RGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKAHYVE----EKIQEEDM 318

Query: 751 ALLMATTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGR 572
            L+ +   +E  + H W+LD+G +NHMCG+K +F +LDE+ R NV  GDE  + V GKG 
Sbjct: 319 LLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGN 378

Query: 571 ILINLKNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKKVHL 407
           ILI LKNGDH++IS+V+++P MK+N+LS+GQL EKGY + + DN LSI D++ +L
Sbjct: 379 ILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNL 433



 Score =  162 bits (410), Expect(2) = 2e-81
 Identities = 75/140 (53%), Positives = 101/140 (72%), Gaps = 1/140 (0%)
 Frame = -3

Query: 419 KGTLILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMV 240
           +  LI K P+SKNRMF ++I   + +CL+    +ESWLWHLRFGHLNF  L++L++  MV
Sbjct: 430 ESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMV 489

Query: 239 KGLPNIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYF 63
           +GLP I+HP Q+CE C+LGK  ++ F  E   R + PLELIH+DVCGP+   + G + YF
Sbjct: 490 RGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYF 549

Query: 62  LTFIDDFTRKIWVYLLQKKS 3
           L FIDDF+RK WVY L++KS
Sbjct: 550 LLFIDDFSRKTWVYFLKEKS 569


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  166 bits (421), Expect(2) = 1e-80
 Identities = 81/175 (46%), Positives = 119/175 (68%), Gaps = 9/175 (5%)
 Frame = -1

Query: 904 RGRG------RYDKSNIDCYSCHRHGHYASECRY---KDDTQRAHCVQGDDNNEFEDSGH 752
           RGRG      RYDKS++ CY+C + GHYASEC+    K   ++A+ V+     + ++   
Sbjct: 263 RGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVE----EKIQEEDM 318

Query: 751 ALLMATTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGR 572
            L+ +   +E  + H W+LD+G +NHMCG+K +F +LDE+ R NV  GDE  + V GKG 
Sbjct: 319 LLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGN 378

Query: 571 ILINLKNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKKVHL 407
           ILI LKNGDH++IS+V+++P MK+N+LS+GQL EKGY + + DN LSI D++ +L
Sbjct: 379 ILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNL 433



 Score =  162 bits (410), Expect(2) = 1e-80
 Identities = 75/140 (53%), Positives = 101/140 (72%), Gaps = 1/140 (0%)
 Frame = -3

Query: 419 KGTLILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMV 240
           +  LI K P+SKNRMF ++I   + +CL+    +ESWLWHLRFGHLNF  L++L++  MV
Sbjct: 430 ESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMV 489

Query: 239 KGLPNIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYF 63
           +GLP I+HP Q+CE C+LGK  ++ F  E   R + PLELIH+DVCGP+   + G + YF
Sbjct: 490 RGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYF 549

Query: 62  LTFIDDFTRKIWVYLLQKKS 3
           L FIDDF+RK WVY L++KS
Sbjct: 550 LLFIDDFSRKTWVYFLKEKS 569


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  166 bits (420), Expect(2) = 2e-80
 Identities = 81/175 (46%), Positives = 119/175 (68%), Gaps = 9/175 (5%)
 Frame = -1

Query: 904 RGRG------RYDKSNIDCYSCHRHGHYASECRY---KDDTQRAHCVQGDDNNEFEDSGH 752
           RGRG      RYDKS++ CY+C + GHYASEC+    K   ++A+ V+     + ++   
Sbjct: 263 RGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVE----EKIQEEDM 318

Query: 751 ALLMATTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGR 572
            L+ +   +E  + H W+LD+G +NHMCG+K +F +LDE+ R NV  GDE  + V GKG 
Sbjct: 319 LLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGN 378

Query: 571 ILINLKNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKKVHL 407
           ILI LKNGDH++IS+V+++P MK+N+LS+GQL EKGY + + DN LSI D++ +L
Sbjct: 379 ILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNL 433



 Score =  162 bits (410), Expect(2) = 2e-80
 Identities = 75/140 (53%), Positives = 101/140 (72%), Gaps = 1/140 (0%)
 Frame = -3

Query: 419 KGTLILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMV 240
           +  LI K P+SKNRMF ++I   + +CL+    +ESWLWHLRFGHLNF  L++L++  MV
Sbjct: 430 ESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMV 489

Query: 239 KGLPNIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYF 63
           +GLP I+HP Q+CE C+LGK  ++ F  E   R + PLELIH+DVCGP+   + G + YF
Sbjct: 490 RGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYF 549

Query: 62  LTFIDDFTRKIWVYLLQKKS 3
           L FIDDF+RK WVY L++KS
Sbjct: 550 LLFIDDFSRKTWVYFLKEKS 569


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
           thaliana]
          Length = 1272

 Score =  167 bits (424), Expect(2) = 2e-80
 Identities = 82/175 (46%), Positives = 119/175 (68%), Gaps = 9/175 (5%)
 Frame = -1

Query: 904 RGRG------RYDKSNIDCYSCHRHGHYASECRY---KDDTQRAHCVQGDDNNEFEDSGH 752
           RGRG      RYDKS++ CY+C + GHYASEC+    K   ++A+ V+     + ++   
Sbjct: 263 RGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFKEKANYVE----EKIQEEDM 318

Query: 751 ALLMATTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGR 572
            L+ +   +E  + H W+LD+G +NHMCG+K +F +LDE+ R NV  GDE  + V GKG 
Sbjct: 319 LLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGN 378

Query: 571 ILINLKNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKKVHL 407
           ILI LKNGDH++IS+V+++P MK+N+LS+GQL EKGY + + DN LSI DK+ +L
Sbjct: 379 ILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNL 433



 Score =  160 bits (405), Expect(2) = 2e-80
 Identities = 74/140 (52%), Positives = 100/140 (71%), Gaps = 1/140 (0%)
 Frame = -3

Query: 419 KGTLILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMV 240
           +  LI K P+SKNRMF ++I   + +CL+    +ESWLWHLRFGHLNF  L++L++  MV
Sbjct: 430 ESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMV 489

Query: 239 KGLPNIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYF 63
           +GLP I+HP Q+CE C+LG   ++ F  E   R + PLELIH+DVCGP+   + G + YF
Sbjct: 490 RGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYF 549

Query: 62  LTFIDDFTRKIWVYLLQKKS 3
           L FIDDF+RK WVY L++KS
Sbjct: 550 LLFIDDFSRKTWVYFLKEKS 569


>ref|XP_010910497.1| PREDICTED: uncharacterized protein LOC105036428 [Elaeis guineensis]
          Length = 373

 Score =  254 bits (650), Expect = 1e-79
 Identities = 119/163 (73%), Positives = 134/163 (82%)
 Frame = -1

Query: 904 RGRGRYDKSNIDCYSCHRHGHYASECRYKDDTQRAHCVQGDDNNEFEDSGHALLMATTTN 725
           RGRGRYDKSN++CYSC ++  Y++ECRYKD+TQRAHCVQ DD +   D  HALLM T T 
Sbjct: 179 RGRGRYDKSNVECYSCDKYAQYSNECRYKDNTQRAHCVQEDDVDYGGD--HALLMVTATG 236

Query: 724 ETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINLKNGD 545
           E  +YHTWFLDT CTNHMC KKELF DLDE FRT VKF D+ TIPVTGKG+ILINLKN D
Sbjct: 237 EAPNYHTWFLDTRCTNHMCSKKELFADLDELFRTKVKFADDSTIPVTGKGQILINLKNED 296

Query: 544 HRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKK 416
           H+YIS VF+VP MKSNLLS+GQL EKGY MN+YDNQL I DKK
Sbjct: 297 HKYISSVFYVPSMKSNLLSIGQLAEKGYAMNLYDNQLFILDKK 339


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  166 bits (420), Expect(2) = 1e-79
 Identities = 81/175 (46%), Positives = 119/175 (68%), Gaps = 9/175 (5%)
 Frame = -1

Query: 904 RGRG------RYDKSNIDCYSCHRHGHYASECRY---KDDTQRAHCVQGDDNNEFEDSGH 752
           RGRG      RYDKS++ CY+C + GHYASEC+    K   ++A+ V+     + ++   
Sbjct: 263 RGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVE----EKIQEEDM 318

Query: 751 ALLMATTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGR 572
            L+ +   +E  + H W+LD+G +NHMCG+K +F +LDE+ R NV  GDE  + V GKG 
Sbjct: 319 LLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGN 378

Query: 571 ILINLKNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKKVHL 407
           ILI LKNGDH++IS+V+++P MK+N+LS+GQL EKGY + + DN LSI D++ +L
Sbjct: 379 ILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNL 433



 Score =  159 bits (402), Expect(2) = 1e-79
 Identities = 74/140 (52%), Positives = 100/140 (71%), Gaps = 1/140 (0%)
 Frame = -3

Query: 419 KGTLILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMV 240
           +  LI K P+SKNRMF ++I   + +CL+    +ESWLWHLRFGHLNF  L++L++  MV
Sbjct: 430 ESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMV 489

Query: 239 KGLPNIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYF 63
           +GLP I+HP Q+CE C+LGK  ++ F  E   R +  LELIH+DVCGP+   + G + YF
Sbjct: 490 RGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYF 549

Query: 62  LTFIDDFTRKIWVYLLQKKS 3
           L FIDDF+RK WVY L++KS
Sbjct: 550 LLFIDDFSRKTWVYFLKEKS 569


>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1342

 Score =  163 bits (412), Expect(2) = 1e-78
 Identities = 80/165 (48%), Positives = 111/165 (67%), Gaps = 4/165 (2%)
 Frame = -1

Query: 904 RGRG----RYDKSNIDCYSCHRHGHYASECRYKDDTQRAHCVQGDDNNEFEDSGHALLMA 737
           RGRG    RYDKS I CY+C++ GHYASECR  +  +        +    ED    LL+A
Sbjct: 264 RGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAEERCQEDG--TLLLA 321

Query: 736 TTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINL 557
               +  + + W+LD+G +NHMCGK+ +F +LDE+ + NV FGDE  + V GKG +LI L
Sbjct: 322 YKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRL 381

Query: 556 KNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFD 422
           KNG+H++IS+V++VP MKSN+LS+GQL EKGY + + +N LSI D
Sbjct: 382 KNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRD 426



 Score =  159 bits (401), Expect(2) = 1e-78
 Identities = 75/136 (55%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
 Frame = -3

Query: 407 ILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMVKGLP 228
           I K P+++NRMF ++I     +CL+    D+SWLWHLRFGHLNF+ L++L+K  MV+GLP
Sbjct: 432 IAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLP 491

Query: 227 NIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYFLTFI 51
            I HP Q+CE C+LGK  RL F  E   R + PLELIH+DVCGP+   + G + YFL FI
Sbjct: 492 CITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFI 551

Query: 50  DDFTRKIWVYLLQKKS 3
           DDF+RK WVY L++KS
Sbjct: 552 DDFSRKTWVYFLKEKS 567


>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1342

 Score =  163 bits (412), Expect(2) = 1e-78
 Identities = 80/165 (48%), Positives = 111/165 (67%), Gaps = 4/165 (2%)
 Frame = -1

Query: 904 RGRG----RYDKSNIDCYSCHRHGHYASECRYKDDTQRAHCVQGDDNNEFEDSGHALLMA 737
           RGRG    RYDKS I CY+C++ GHYASECR  +  +        +    ED    LL+A
Sbjct: 264 RGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAEERCQEDG--TLLLA 321

Query: 736 TTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINL 557
               +  + + W+LD+G +NHMCGK+ +F +LDE+ + NV FGDE  + V GKG +LI L
Sbjct: 322 YKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRL 381

Query: 556 KNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFD 422
           KNG+H++IS+V++VP MKSN+LS+GQL EKGY + + +N LSI D
Sbjct: 382 KNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRD 426



 Score =  159 bits (401), Expect(2) = 1e-78
 Identities = 75/136 (55%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
 Frame = -3

Query: 407 ILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMVKGLP 228
           I K P+++NRMF ++I     +CL+    D+SWLWHLRFGHLNF+ L++L+K  MV+GLP
Sbjct: 432 IAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLP 491

Query: 227 NIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYFLTFI 51
            I HP Q+CE C+LGK  RL F  E   R + PLELIH+DVCGP+   + G + YFL FI
Sbjct: 492 CITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFI 551

Query: 50  DDFTRKIWVYLLQKKS 3
           DDF+RK WVY L++KS
Sbjct: 552 DDFSRKTWVYFLKEKS 567


>gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1033

 Score =  163 bits (412), Expect(2) = 1e-78
 Identities = 80/165 (48%), Positives = 111/165 (67%), Gaps = 4/165 (2%)
 Frame = -1

Query: 904 RGRG----RYDKSNIDCYSCHRHGHYASECRYKDDTQRAHCVQGDDNNEFEDSGHALLMA 737
           RGRG    RYDKS I CY+C++ GHYASECR  +  +        +    ED    LL+A
Sbjct: 198 RGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAEERCQEDG--TLLLA 255

Query: 736 TTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINL 557
               +  + + W+LD+G +NHMCGK+ +F +LDE+ + NV FGDE  + V GKG +LI L
Sbjct: 256 YKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRL 315

Query: 556 KNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFD 422
           KNG+H++IS+V++VP MKSN+LS+GQL EKGY + + +N LSI D
Sbjct: 316 KNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRD 360



 Score =  159 bits (401), Expect(2) = 1e-78
 Identities = 75/136 (55%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
 Frame = -3

Query: 407 ILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMVKGLP 228
           I K P+++NRMF ++I     +CL+    D+SWLWHLRFGHLNF+ L++L+K  MV+GLP
Sbjct: 366 IAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLP 425

Query: 227 NIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYFLTFI 51
            I HP Q+CE C+LGK  RL F  E   R + PLELIH+DVCGP+   + G + YFL FI
Sbjct: 426 CITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFI 485

Query: 50  DDFTRKIWVYLLQKKS 3
           DDF+RK WVY L++KS
Sbjct: 486 DDFSRKTWVYFLKEKS 501


>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1331

 Score =  162 bits (411), Expect(2) = 5e-78
 Identities = 79/165 (47%), Positives = 111/165 (67%), Gaps = 4/165 (2%)
 Frame = -1

Query: 904 RGRG----RYDKSNIDCYSCHRHGHYASECRYKDDTQRAHCVQGDDNNEFEDSGHALLMA 737
           RGRG    RYDKS I CY+C++ GHYASECR  +  +        +    ED    LL+A
Sbjct: 253 RGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAEERCQEDG--TLLLA 310

Query: 736 TTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINL 557
               +  + + W+LD+G +NHMCGK+ +F +LDE+ + NV FGDE  + V GKG +LI L
Sbjct: 311 YKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIQL 370

Query: 556 KNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFD 422
           KNG+H++IS++++VP MKSN+LS+GQL EKGY + + +N LSI D
Sbjct: 371 KNGEHQFISNIYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRD 415



 Score =  157 bits (397), Expect(2) = 5e-78
 Identities = 75/136 (55%), Positives = 96/136 (70%), Gaps = 1/136 (0%)
 Frame = -3

Query: 407 ILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMVKGLP 228
           I K P+ +NRMF ++I     +CL+    D+SWLWHLRFGHLNF+ L +L+K  MV+GLP
Sbjct: 421 ITKVPMMRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLDLLSKKAMVRGLP 480

Query: 227 NIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYFLTFI 51
            I HP Q+CE C+LGK  RL F  E   R + PLELIH+DVCGP+   + G + YFL FI
Sbjct: 481 CITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFI 540

Query: 50  DDFTRKIWVYLLQKKS 3
           DDF+RK WVY L++KS
Sbjct: 541 DDFSRKTWVYFLKEKS 556


>gb|KYP32069.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 954

 Score =  159 bits (401), Expect(2) = 3e-77
 Identities = 78/165 (47%), Positives = 110/165 (66%), Gaps = 4/165 (2%)
 Frame = -1

Query: 904 RGRG----RYDKSNIDCYSCHRHGHYASECRYKDDTQRAHCVQGDDNNEFEDSGHALLMA 737
           RGRG    RY KS I CY+C++ GHYAS+CR  +  +        +    ED    LL+A
Sbjct: 199 RGRGNPNSRYGKSRIKCYNCNKFGHYASKCRAPNKNKVEEKANYAEERCQEDG--TLLLA 256

Query: 736 TTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINL 557
               +  + + W+LD+G +NHMCGK+ +F +LDE+ + NV FGDE  + V GKG +LI L
Sbjct: 257 YKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRL 316

Query: 556 KNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFD 422
           KNG+H++IS+V++VP MKSN+LS+GQL EKGY + + +N LSI D
Sbjct: 317 KNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRD 361



 Score =  158 bits (400), Expect(2) = 3e-77
 Identities = 75/136 (55%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
 Frame = -3

Query: 407 ILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMVKGLP 228
           I K P+++NRMF ++I     +CL+    D+SWLWHLRFGHLNF+ L++L+K  MV+GLP
Sbjct: 367 IAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLP 426

Query: 227 NIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYFLTFI 51
            I HP Q+CE C+LGK  RL F  E   R + PLELIH+DVCGP+   + G + YFL FI
Sbjct: 427 CITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLFFI 486

Query: 50  DDFTRKIWVYLLQKKS 3
           DDF+RK WVY L++KS
Sbjct: 487 DDFSRKTWVYFLKEKS 502


>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
          Length = 1283

 Score =  155 bits (391), Expect(2) = 2e-74
 Identities = 77/162 (47%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
 Frame = -1

Query: 886 DKSNIDCYSCHRHGHYASECRYKDDTQRAHCVQGDDNNEFEDSGH--ALLMATTTNETLD 713
           DKSN++CY CHR+GHY  ECR   + Q      G++   F +     +LLMA   N+   
Sbjct: 236 DKSNVECYRCHRYGHYKXECRTNMNKQ------GEERTNFAEKEEEVSLLMACHANQXTH 289

Query: 712 YHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINLKNGDHRYI 533
            + W++DTGC+NHMCG K  F+DLDETFR +V FGD   + V GKG + I+ K    + I
Sbjct: 290 PNLWYIDTGCSNHMCGDKSAFSDLDETFRXSVTFGDNSKVSVMGKGSVXIHSKEKSDQII 349

Query: 532 SDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKKVHL 407
           S+VFFVPD+K+NLLS+ QL EKGY + I D    I D+K+ L
Sbjct: 350 SNVFFVPDLKTNLLSVXQLQEKGYEIFIKDGVCRIQDEKLGL 391



 Score =  153 bits (386), Expect(2) = 2e-74
 Identities = 70/137 (51%), Positives = 90/137 (65%), Gaps = 1/137 (0%)
 Frame = -3

Query: 410 LILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMVKGL 231
           LI +  ++ NRMFP+ +      C    + DE WLWH R+GHLNF  LK L + NMV GL
Sbjct: 391 LIAQVNMTTNRMFPLYLDNTTQNCFSTKLMDEGWLWHFRYGHLNFGGLKTLQQKNMVTGL 450

Query: 230 PNIHHPEQLCEYCILGKSHRLPF-VGEQRRTKHPLELIHSDVCGPMNILTNGGNRYFLTF 54
           P I  P Q+CE C++GK HR  F  G+  R    LEL+HSD+CGP+N  +NGG RYF+TF
Sbjct: 451 PPIXTPSQICEECVVGKQHRYQFPKGKSWRXNKVLELVHSDICGPINPTSNGGKRYFITF 510

Query: 53  IDDFTRKIWVYLLQKKS 3
           I D++ K WVY LQ+KS
Sbjct: 511 IXDYSXKTWVYFLQEKS 527


>gb|KYP57183.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 884

 Score =  157 bits (397), Expect(2) = 3e-74
 Identities = 71/137 (51%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
 Frame = -3

Query: 410 LILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMVKGL 231
           LI+ + ++ NRMFP+ I   + KC    V D +WLWHLR+GHL+F+ LK L + NMV+GL
Sbjct: 373 LIVDAKMTANRMFPMHIQYDIQKCFSTRVQDPTWLWHLRYGHLSFKGLKTLHEKNMVEGL 432

Query: 230 PNIHHPEQLCEYCILGKSHRLPFV-GEQRRTKHPLELIHSDVCGPMNILTNGGNRYFLTF 54
           P I+ P ++CE CI+GK HR  F  G+  R +  L+L+HSD+CGP+N  +NG  RYF+ F
Sbjct: 433 PKINCPTEICEDCIVGKQHRDSFPHGKAWRAQQILQLVHSDICGPINPTSNGNKRYFIIF 492

Query: 53  IDDFTRKIWVYLLQKKS 3
           IDD +RK WVY LQ+KS
Sbjct: 493 IDDHSRKTWVYFLQEKS 509



 Score =  150 bits (378), Expect(2) = 3e-74
 Identities = 78/163 (47%), Positives = 103/163 (63%), Gaps = 4/163 (2%)
 Frame = -1

Query: 904 RGRGR---YDKSNIDCYSCHRHGHYASECRYKDDTQRAHCVQGDDNNEFEDSGHALLMA- 737
           RGRGR   +DK+ ++CY CH+ GHY  EC  K+   + + V      EFE  G  LLMA 
Sbjct: 212 RGRGRHAQFDKTRVECYHCHKLGHYQYECPDKEKETKVNLV------EFE--GEMLLMAY 263

Query: 736 TTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINL 557
               E     TW+LD+GC+NHMCG K LF ++DETFR  VK GD   I V GKG I  ++
Sbjct: 264 IDKKENSSGDTWYLDSGCSNHMCGNKSLFYNMDETFRETVKLGDNSCISVMGKGDIKFHM 323

Query: 556 KNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSI 428
           KN     IS+VF++PD+KSNL+SMGQL E+GY++ I  ++  I
Sbjct: 324 KNNTVHTISNVFYIPDLKSNLISMGQLQERGYIIIIQQSRCQI 366


>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
          Length = 1246

 Score =  155 bits (392), Expect(2) = 4e-73
 Identities = 77/162 (47%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
 Frame = -1

Query: 886 DKSNIDCYSCHRHGHYASECRYKDDTQRAHCVQGDDNNEFEDSGH--ALLMATTTNETLD 713
           DKSN++CY CHR+GHY SECR   + Q      G++   F +     +LLMA   N+   
Sbjct: 236 DKSNVECYRCHRYGHYKSECRTNMNKQ------GEERTNFAEKEEEVSLLMACHANQGTH 289

Query: 712 YHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINLKNGDHRYI 533
            + W++DT C+NHMCG K  F+DLDETFR +V FGD   + V GKG + I+ K    + I
Sbjct: 290 XNLWYIDTXCSNHMCGDKSAFSDLDETFRNSVTFGDNSKVSVMGKGSVRIHSKEKSDKII 349

Query: 532 SDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKKVHL 407
           S+VFFVPD+K+ LLS+GQL EKGY + I D    I D+K+ L
Sbjct: 350 SNVFFVPDLKTTLLSVGQLQEKGYEIFIKDGVCRIQDEKLGL 391



 Score =  148 bits (374), Expect(2) = 4e-73
 Identities = 69/137 (50%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
 Frame = -3

Query: 410 LILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMVKGL 231
           LI +  ++ NRMFP+ +      C    + DE WLWH R+GHLNF  LK L   NMV GL
Sbjct: 391 LIAQVNMTTNRMFPLYLDNTTQNCFSVKLMDEGWLWHFRYGHLNFXXLKTLQXKNMVTGL 450

Query: 230 PNIHHPEQLCEYCILGKSHRLPF-VGEQRRTKHPLELIHSDVCGPMNILTNGGNRYFLTF 54
           P I    Q+CE C+ GK HR  F  G+  R    LEL+HSD+CGP+N  +NGG RYF+TF
Sbjct: 451 PXIQTXSQICEECVXGKQHRYQFPKGKSWRXNKVLELVHSDICGPINPTSNGGKRYFITF 510

Query: 53  IDDFTRKIWVYLLQKKS 3
           I D++ K WVY LQ+KS
Sbjct: 511 IXDYSWKTWVYFLQEKS 527


>gb|KYP46330.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 646

 Score =  156 bits (395), Expect(2) = 3e-72
 Identities = 78/172 (45%), Positives = 104/172 (60%), Gaps = 10/172 (5%)
 Frame = -1

Query: 904 RGRGR-----YDKSNIDCYSCHRHGHYASECRYKD-----DTQRAHCVQGDDNNEFEDSG 755
           RGRG+      ++ N +CY C + GH A++CRYK      + Q  H  +  DN +     
Sbjct: 103 RGRGKCSFTNQERKNFNCYHCGKFGHKAADCRYKQQENIAENQYKHTGESSDNPQ----- 157

Query: 754 HALLMATTTNETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKG 575
              L+    N + D   W+LDTGC+NHMCGKKELF  LDET ++ VKF +   IP+ GKG
Sbjct: 158 --TLLLVANNFSGDGDIWYLDTGCSNHMCGKKELFFSLDETVKSTVKFENNSNIPILGKG 215

Query: 574 RILINLKNGDHRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDK 419
           R+ I LK+G   +ISDVF+ P +  NLLSMGQL+EKGY M I+D    + DK
Sbjct: 216 RVAIRLKDGSQNFISDVFYAPGLHHNLLSMGQLSEKGYNMQIHDGYCMLIDK 267



 Score =  144 bits (363), Expect(2) = 3e-72
 Identities = 64/136 (47%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
 Frame = -3

Query: 407 ILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMVKGLP 228
           I K  ++ NR+FP+++      CL +++ ++ WLWH+RFGH +F  L  L++   V GLP
Sbjct: 272 IAKVKMTPNRLFPLNVQHDKIPCLSSIIQNDDWLWHMRFGHYHFSGLNFLSRKEYVSGLP 331

Query: 227 NIHHPEQLCEYCILGKSHRLPF-VGEQRRTKHPLELIHSDVCGPMNILTNGGNRYFLTFI 51
            I+ PE +CE C +GK HR  F  G+  R + PLE++HSD+C  + I ++GG+RYF+TFI
Sbjct: 332 VINIPEGICETCEIGKKHRESFPTGKSWRARKPLEIVHSDLC-MVEIPSHGGSRYFITFI 390

Query: 50  DDFTRKIWVYLLQKKS 3
           DDF+RK WVYLL++KS
Sbjct: 391 DDFSRKAWVYLLKQKS 406


>gb|KYP48234.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1029

 Score =  156 bits (394), Expect(2) = 4e-72
 Identities = 71/139 (51%), Positives = 100/139 (71%), Gaps = 1/139 (0%)
 Frame = -3

Query: 419 KGTLILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMV 240
           K  LIL++PLSKNR F V+I +  ++CL + VN E WLWH RFGHLNF+ L +L++ NMV
Sbjct: 374 KKRLILRAPLSKNRTFRVEIQVLEHQCLVSAVNSEEWLWHYRFGHLNFRDLNLLSRYNMV 433

Query: 239 KGLPNIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYF 63
            GLP +H P+++C  C+  K  R  F      R++  LE+++SDVCGP+   + GGN+YF
Sbjct: 434 TGLPRLHQPKEMCRECVECKQPRNTFKQHVPIRSRCKLEVVYSDVCGPLQTESLGGNKYF 493

Query: 62  LTFIDDFTRKIWVYLLQKK 6
           +TFIDDF+RK+WVYL++ K
Sbjct: 494 VTFIDDFSRKVWVYLIKNK 512



 Score =  144 bits (363), Expect(2) = 4e-72
 Identities = 72/166 (43%), Positives = 102/166 (61%), Gaps = 1/166 (0%)
 Frame = -1

Query: 901 GRGRYDKSNIDCYSCHRHGHYASEC-RYKDDTQRAHCVQGDDNNEFEDSGHALLMATTTN 725
           GR + +K +I C++C R GHYA EC   K+    A  V+ DD+    DS   LLM TT  
Sbjct: 216 GRKKVNKRHIQCFNCQRWGHYAEECYNKKEHNNEAQLVKEDDS----DSDQVLLMVTTKT 271

Query: 724 ETLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINLKNGD 545
                + W+LDTGC++HM G+K+ F+ LDE+ ++ VKF D +T+   G G + I  KN  
Sbjct: 272 VENSENLWYLDTGCSSHMTGRKDWFSKLDESVKSKVKFADHKTLDAEGIGEVAIRSKNRQ 331

Query: 544 HRYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKKVHL 407
              IS+V FVP MKSNLLS GQL E+G+ M + +N ++++D K  L
Sbjct: 332 RSLISNVLFVPHMKSNLLSFGQLLERGFKMVMENNGMTVYDNKKRL 377


>gb|KYP39567.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score =  165 bits (418), Expect(2) = 5e-72
 Identities = 80/140 (57%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
 Frame = -3

Query: 419 KGTLILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMV 240
           KGT IL++PLS NR F VDISM  + C  + V D +WLWHLRFGHLNF SL  LAK  MV
Sbjct: 212 KGTPILRAPLSDNRTFRVDISMSKHMCFASAVFDVNWLWHLRFGHLNFGSLSQLAKKEMV 271

Query: 239 KGLPNIHHPEQLCEYCILGKSHRLPF-VGEQRRTKHPLELIHSDVCGPMNILTNGGNRYF 63
            GLP+I   +  CE C+LGK  R PF V  + R+K  LE+I++DVCGP  + + GGNRYF
Sbjct: 272 IGLPHIEKSDATCESCMLGKQARNPFKVHLETRSKDVLEVIYTDVCGPFEVPSLGGNRYF 331

Query: 62  LTFIDDFTRKIWVYLLQKKS 3
           +TFIDDF+++IW++LL +KS
Sbjct: 332 ITFIDDFSKRIWLFLLGRKS 351



 Score =  134 bits (338), Expect(2) = 5e-72
 Identities = 71/164 (43%), Positives = 103/164 (62%), Gaps = 7/164 (4%)
 Frame = -1

Query: 886 DKSNIDCYSCHRHGHYASECRYKDDT----QRAHCVQGDDNNEFEDSGHALLMATTTNET 719
           DKS + CY+C+++GHYA++C  K ++    + A+  Q +D+ +       LLM TTT   
Sbjct: 54  DKSYVQCYNCNKYGHYAADCWSKGNSSNREEEANVAQKEDSED-----EVLLMVTTTEPE 108

Query: 718 LDY-HTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINLKNGDH 542
             Y  +W+LDTGC+NHM  +K  F +L+E  +T VKF D  T+   GKG+ILI  ++G  
Sbjct: 109 KIYGESWYLDTGCSNHMSFQKSWFIELNEKIKTKVKFADNSTVKSEGKGKILIRRRDGKA 168

Query: 541 RYISDVFFVPDMKSNLLSMGQLTEKGYVMN--IYDNQLSIFDKK 416
             ISDV +VP MK NLLS+GQL +KGY+++    +  L I DKK
Sbjct: 169 AIISDVLYVPAMKHNLLSIGQLLQKGYLLDWKWKEQMLRILDKK 212


>gb|KYP68042.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 999

 Score =  153 bits (387), Expect(2) = 7e-72
 Identities = 69/137 (50%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
 Frame = -3

Query: 410 LILKSPLSKNRMFPVDISMGVYKCLEAVVNDESWLWHLRFGHLNFQSLKMLAKNNMVKGL 231
           L+LKSPL+KNRMF VDI +  ++C  A +N E WLWH RFGHLNF+ L  L   ++VKGL
Sbjct: 422 LLLKSPLTKNRMFKVDIDILDHECFAAAINKEEWLWHYRFGHLNFKDLHTLKSKSLVKGL 481

Query: 230 PNIHHPEQLCEYCILGKSHRLPFVGE-QRRTKHPLELIHSDVCGPMNILTNGGNRYFLTF 54
           P+I+ P ++C+ C+  K  R  F      ++K  LE+++SDVC P+   + GGNRYF++F
Sbjct: 482 PHINQPSEVCKECLECKQSRNSFKQHVSIKSKEKLEVVYSDVCDPIQTESLGGNRYFVSF 541

Query: 53  IDDFTRKIWVYLLQKKS 3
           IDDF+RK+W+YL+++KS
Sbjct: 542 IDDFSRKLWIYLIKRKS 558



 Score =  146 bits (368), Expect(2) = 7e-72
 Identities = 75/165 (45%), Positives = 103/165 (62%), Gaps = 5/165 (3%)
 Frame = -1

Query: 886 DKSNIDCYSCHRHGHYASECRY----KDDTQRAHCVQGDDNNEFEDSGHALLMATTTN-E 722
           D  N+ CY+C++ GHYA  C+Y    +D+ + A         E +DS   LLM TTT  E
Sbjct: 264 DIRNVKCYNCNKLGHYAKSCQYPNPRRDEARLAR------EEEDDDSEQVLLMVTTTQKE 317

Query: 721 TLDYHTWFLDTGCTNHMCGKKELFTDLDETFRTNVKFGDERTIPVTGKGRILINLKNGDH 542
               + W+LDTGC+ HM G+K+ F +LDE+ ++ VKF D+R +   G G+ILI  KN   
Sbjct: 318 GGGDNCWYLDTGCSTHMTGRKDWFVNLDESIKSKVKFADDRVMIAEGVGKILIRRKNDSR 377

Query: 541 RYISDVFFVPDMKSNLLSMGQLTEKGYVMNIYDNQLSIFDKKVHL 407
            +I+DV FVP MKSNLLS+GQL EKGYV  + D  L+I+D +  L
Sbjct: 378 AFITDVLFVPGMKSNLLSLGQLLEKGYVSKLEDKMLTIYDSQHRL 422