BLASTX nr result
ID: Rehmannia28_contig00035964
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00035964
(437 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 64 2e-09
gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago a... 62 1e-08
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ... 62 1e-08
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 61 4e-08
gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica m... 61 4e-08
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 58 3e-07
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 58 3e-07
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 58 3e-07
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 58 3e-07
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 58 3e-07
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 58 3e-07
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 58 3e-07
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus] 57 6e-07
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 64.3 bits (155), Expect = 2e-09
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR VNTRLRGPPGF +PFT+P P
Sbjct: 396 WQPITLEFPVRRVNTRLRGPPGFLSPFTRPQP 427
>gb|AGW45389.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 62.4 bits (150), Expect = 1e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR VNT LRGPPGF +PFT+P P
Sbjct: 396 WQPITLEFPVRKVNTLLRGPPGFDSPFTRPQP 427
>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 62.4 bits (150), Expect = 1e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR VNT LRGPPGF +PFT+P P
Sbjct: 396 WQPITLEFPVRKVNTLLRGPPGFDSPFTRPQP 427
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 60.8 bits (146), Expect = 4e-08
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR V T +RGPPGF NPFT+P P
Sbjct: 394 WQPITLEFPVRDVRTTVRGPPGFKNPFTQPQP 425
>gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 60.8 bits (146), Expect = 4e-08
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR V T +RGPPGF NPFT+P P
Sbjct: 396 WQPITLEFPVRDVRTTVRGPPGFKNPFTQPQP 427
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 58.2 bits (139), Expect = 3e-07
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR VNT LRG PGF +PF +P P
Sbjct: 396 WQPITLEFPVRKVNTHLRGAPGFDSPFARPQP 427
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 58.2 bits (139), Expect = 3e-07
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR VNT LRG PGF +PF +P P
Sbjct: 396 WQPITLEFPVRKVNTHLRGAPGFDSPFARPQP 427
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 58.2 bits (139), Expect = 3e-07
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR VNT LRG PGF +PF +P P
Sbjct: 396 WQPITLEFPVRKVNTHLRGAPGFDSPFARPQP 427
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 58.2 bits (139), Expect = 3e-07
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR VNT LRG PGF +PF +P P
Sbjct: 396 WQPITLEFPVRKVNTHLRGAPGFDSPFARPQP 427
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 58.2 bits (139), Expect = 3e-07
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR VNT LRG PGF +PF +P P
Sbjct: 396 WQPITLEFPVRKVNTHLRGAPGFDSPFARPQP 427
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 58.2 bits (139), Expect = 3e-07
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR VNT LRG PGF +PF +P P
Sbjct: 396 WQPITLEFPVRKVNTHLRGAPGFDSPFARPQP 427
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 58.2 bits (139), Expect = 3e-07
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR VNT LRG PGF +PF +P P
Sbjct: 396 WQPITLEFPVRKVNTHLRGAPGFDSPFARPQP 427
>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 57.4 bits (137), Expect = 6e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +3
Query: 3 WQPITLEFPVRTVNTRLRGPPGFHNPFTKPHP 98
WQPITLEFPVR V+T LRGPP F +PFT+P P
Sbjct: 396 WQPITLEFPVRKVHTLLRGPPWFDSPFTRPQP 427