BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00035605
         (1049 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         377   e-123
gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposo...   387   e-123
gb|KYP44928.1| Retrovirus-related Pol polyprotein from transposo...   368   e-123
gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposo...   387   e-121
gb|KYP71150.1| Retrovirus-related Pol polyprotein from transposo...   387   e-121
gb|KYP49211.1| Retrovirus-related Pol polyprotein from transposo...   374   e-118
gb|KYP66912.1| Retrovirus-related Pol polyprotein from transposo...   370   e-118
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   377   e-117
gb|KYP58997.1| Retrovirus-related Pol polyprotein from transposo...   370   e-117
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         377   e-117
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   377   e-117
gb|KYP68042.1| Retrovirus-related Pol polyprotein from transposo...   369   e-116
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   374   e-116
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             373   e-116
gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                   369   e-114
gb|AIC77183.1| polyprotein [Gossypium barbadense]                     370   e-114
ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392...   371   e-113
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   360   e-113
gb|KYP47011.1| Retrovirus-related Pol polyprotein from transposo...   341   e-112
gb|KYP67178.1| Retrovirus-related Pol polyprotein from transposo...   353   e-111

>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  377 bits (968), Expect = e-123
 Identities = 199/357 (55%), Positives = 248/357 (69%), Gaps = 8/357 (2%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P   W EAV+C+VYLLNRSPTKS+   TP EAWSG KP V HL+VFGSIA+AH+P E R 
Sbjct: 149  PKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRN 208

Query: 868  KLDDRVEKTVLIGYKQG--GYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY     GYKL+NP TKK I+SR++ F EE  W W+  ++E+      
Sbjct: 209  KLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWN--SNEEDYNFFP 266

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLP---QIPAES--RRPR-RQIQQPVHLQDYEVTFN 533
            +  EE+   PT  E PS   T   + P   QI   S  R PR R IQ+      YEVT  
Sbjct: 267  H-FEEDKPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL-----YEVT-- 318

Query: 532  AEIDNDEKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKA 353
               +N E L  F   A+ EP+ F+EAI+   W  AM+EEI +I++N+TWELT +P G+KA
Sbjct: 319  ---ENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKA 375

Query: 352  IDVKWVFKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQK 173
            I VKWV+K +  S G+VERYKARLVAKG+ QR G DY E+F+ VAR+ET++L+I+LAAQ 
Sbjct: 376  IGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQN 435

Query: 172  QWKIHQMDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            +WKIHQMDVKSAFLNG LEE V+++QP G+I +G EDKV RLKK LYGLKQAPRAWN
Sbjct: 436  KWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWN 492


>gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 990

 Score =  387 bits (993), Expect = e-123
 Identities = 197/350 (56%), Positives = 248/350 (70%), Gaps = 2/350 (0%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P  FW EAVS +VY+LNR PTKS+ + TP EAWSG KP+++HLK+FG IAYAH+P + R 
Sbjct: 305  PREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKIFGCIAYAHVPDQLRK 364

Query: 868  KLDDRVEKTVLIGYKQGG--YKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY      YKL+NPVTKKVI+SRDVTF EE  W W     ++    ++
Sbjct: 365  KLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMWDWSFKAQKEP---VI 421

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAEIDND 515
                 E E+  +N  P             P  S RP+RQ + P  L+DY V  N    +D
Sbjct: 422  NPENYEEENGHVNPTPDE-----------PETSSRPQRQRRLPARLEDY-VVGNDNDPSD 469

Query: 514  EKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVKWV 335
            E++++FA  AD EPVTFEEA  N  W KAM+EEI AIE+N TWELTD+P   K I VKWV
Sbjct: 470  EEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPADKKPIGVKWV 529

Query: 334  FKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKIHQ 155
            +K + KS+G+++R KARLV KG++Q+ G DY EVF+ VAR++TI++LI+L+AQ  WKIHQ
Sbjct: 530  YKTKYKSSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQ 589

Query: 154  MDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAW 5
            MDVKSAFLNGTLEE V+V+QP G+  +G EDKVYRLKKALYGLKQAPRAW
Sbjct: 590  MDVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPRAW 639


>gb|KYP44928.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 394

 Score =  368 bits (944), Expect = e-123
 Identities = 187/353 (52%), Positives = 248/353 (70%), Gaps = 5/353 (1%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P  FW E V+ +VY+LNR PTKS+ N TP EAWSG +P+++HL++FG IAYAH+P + R 
Sbjct: 18   PREFWVEEVATAVYILNRCPTKSVLNKTPEEAWSGRRPSIRHLRIFGCIAYAHVPNQLRK 77

Query: 868  KLDDRVEKTVLIGYKQGG--YKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ E+ V IGY      YKL+NP T KVI+SRDVTF E+  W W   + ++  K ++
Sbjct: 78   KLDDKGERCVFIGYSSNSKAYKLYNPETNKVIISRDVTFDEKGMWDWSFKSQKE--KMVI 135

Query: 694  YVLEEEVES---PTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAEI 524
                EE E    P ++E               P  S RPRR+ Q P  L+DY V  N   
Sbjct: 136  SNNYEESEGQPDPVVDE---------------PESSNRPRRRCQLPARLEDY-VMSNDND 179

Query: 523  DNDEKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDV 344
             +DE++++FA  AD E VTFEEA  + +W KAM++EI AIE+N +WELT++P   K I V
Sbjct: 180  PSDEEIINFALFADCELVTFEEASNDEKWRKAMDDEIHAIEKNESWELTNLPTNKKPIGV 239

Query: 343  KWVFKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWK 164
            KWV+KI+    G+V+R+KARLVAKG++Q+ G DY EVF+ VAR++TI+++I+L+AQ  WK
Sbjct: 240  KWVYKIKYNPKGEVDRFKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMIISLSAQNNWK 299

Query: 163  IHQMDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAW 5
            I+QMDVKSAFLNG LEE V+V+QP G++ +G EDKVYRLKKALYGLKQAPRAW
Sbjct: 300  IYQMDVKSAFLNGILEEEVYVEQPVGYVVKGEEDKVYRLKKALYGLKQAPRAW 352


>gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1228

 Score =  387 bits (994), Expect = e-121
 Identities = 198/350 (56%), Positives = 251/350 (71%), Gaps = 2/350 (0%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P  FW EAVS +VY+LNR PTKS+ + TP EAWSG KP+++HL++FG IAYAH+P + R 
Sbjct: 543  PREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLRIFGCIAYAHVPDQLRK 602

Query: 868  KLDDRVEKTVLIGYKQGG--YKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY      YKL+NPVTKKVI+SRDVTF EE  W W         +++ 
Sbjct: 603  KLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMWDWSFKA-----QKVP 657

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAEIDND 515
             V  E  E          +  V T+ P  P  S RP+RQ + P  L+DY V  N    +D
Sbjct: 658  AVNSENYEEE--------NGHVDTT-PDEPETSSRPQRQRRLPARLEDY-VVGNDNDPSD 707

Query: 514  EKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVKWV 335
            E++++FA  AD EPVTFEEA  N  W KAM+EEI AIE+N TWELTD+P   + I VKWV
Sbjct: 708  EEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPANKRQIGVKWV 767

Query: 334  FKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKIHQ 155
            +K + KSNG+++R+KARLVAKG++Q+ G DY EVF+ VAR++TI++LI+++AQ  WKIHQ
Sbjct: 768  YKTKYKSNGEIDRFKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISISAQNNWKIHQ 827

Query: 154  MDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAW 5
            MDVKSAFLNGTLEE V+V+QP G+  +G EDKVYRLKKALYGLKQAPRAW
Sbjct: 828  MDVKSAFLNGTLEEEVYVEQPAGYKIKGKEDKVYRLKKALYGLKQAPRAW 877


>gb|KYP71150.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1228

 Score =  387 bits (993), Expect = e-121
 Identities = 197/350 (56%), Positives = 248/350 (70%), Gaps = 2/350 (0%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P  FW EAVS +VY+LNR PTKS+ + TP EAWSG KP+++HLK+FG IAYAH+P + R 
Sbjct: 543  PREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKIFGCIAYAHVPDQLRK 602

Query: 868  KLDDRVEKTVLIGYKQGG--YKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY      YKL+NPVTKKVI+SRDVTF EE  W W     ++    ++
Sbjct: 603  KLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMWDWSFKAQKEP---VI 659

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAEIDND 515
                 E E+  +N  P             P  S RP+RQ + P  L+DY V  N    +D
Sbjct: 660  NPENYEEENGHVNPTPDE-----------PETSSRPQRQRRLPARLEDY-VVGNDNDPSD 707

Query: 514  EKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVKWV 335
            E++++FA  AD EPVTFEEA  N  W KAM+EEI AIE+N TWELTD+P   K I VKWV
Sbjct: 708  EEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPADKKPIGVKWV 767

Query: 334  FKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKIHQ 155
            +K + KS+G+++R KARLV KG++Q+ G DY EVF+ VAR++TI++LI+L+AQ  WKIHQ
Sbjct: 768  YKTKYKSSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQ 827

Query: 154  MDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAW 5
            MDVKSAFLNGTLEE V+V+QP G+  +G EDKVYRLKKALYGLKQAPRAW
Sbjct: 828  MDVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPRAW 877


>gb|KYP49211.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 999

 Score =  374 bits (959), Expect = e-118
 Identities = 194/350 (55%), Positives = 245/350 (70%), Gaps = 2/350 (0%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P  FW EAVS +VY+LNR  TKSI + TP EAWSG KP++ HL++FG IAYAH+P + R 
Sbjct: 353  PREFWAEAVSTTVYILNRCLTKSICDKTPEEAWSGRKPSIHHLRIFGCIAYAHVPDQLRK 412

Query: 868  KLDDRVEKTVLIGYKQGG--YKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK++ IGY      YKL+NPVTKKVI++RDVTF EE  W W     ++      
Sbjct: 413  KLDDKGEKSIFIGYSTNSKAYKLYNPVTKKVIINRDVTFDEEGMWDWSFKAQKEPA---- 468

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAEIDND 515
             V  E  E    +  P+         P  P  S RP+RQ + P  L+DY V  N    +D
Sbjct: 469  -VNPENYEEENGHVDPT---------PDEPETSSRPQRQRRLPARLEDY-VVGNDNDPSD 517

Query: 514  EKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVKWV 335
            E++++FA  AD +PVTFEEA  N    KAM+EEI AIE+N TWELTD+P   + I VKWV
Sbjct: 518  EEIINFALFADCKPVTFEEASNNQHLRKAMDEEIHAIEKNQTWELTDLPADKRPIGVKWV 577

Query: 334  FKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKIHQ 155
            +K + KS+G+++R KARLVAKG++Q+ G DY EVF  VAR++TI++LI+L+AQ  WKIHQ
Sbjct: 578  YKTKYKSSGEIDRLKARLVAKGYKQKPGIDYFEVFVPVARLDTIRMLISLSAQNNWKIHQ 637

Query: 154  MDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAW 5
            MDVKSAFLNGTLEE V+V+QP G+  +G EDKVYRLKKALYGLKQAPRAW
Sbjct: 638  MDVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPRAW 687


>gb|KYP66912.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 861

 Score =  370 bits (950), Expect = e-118
 Identities = 178/350 (50%), Positives = 245/350 (70%), Gaps = 1/350 (0%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P  FWGEAVS ++Y+LNR P + +  ITP EAWSG KP+V HL++FGSI Y H+P   R 
Sbjct: 171  PKRFWGEAVSTAIYILNRCPARRLDEITPEEAWSGLKPDVSHLRIFGSICYKHVPDVHRK 230

Query: 868  KLDDRVEKTVLIGYKQ-GGYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIVY 692
            KLDDR EK +L+GY   G YK++NP+T+K+++ RD+   E + W W+ D  +D  ++ + 
Sbjct: 231  KLDDRGEKLILLGYHSTGAYKVYNPLTQKMMLCRDLKIDETQQWDWN-DRSDDLGRQTII 289

Query: 691  VLEEEVESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAEIDNDE 512
             L+E++E     E+ +                +RP+R  Q P  L DYEV  ++++  + 
Sbjct: 290  HLDEDIEQQPEAEIHN---------------GKRPQRMRQTPQRLSDYEVFLDSQVTTEG 334

Query: 511  KLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVKWVF 332
             LVH A  A++EPV+FEEA++   W++AM EE+ +IE+N TW+LT +P G KAI V+WV+
Sbjct: 335  DLVHMALSAEMEPVSFEEAVKETHWMEAMREELRSIEKNQTWKLTPLPMGKKAITVRWVY 394

Query: 331  KIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKIHQM 152
            K+++ S G+V +YKARLVAKGF QR G DY EVF+ VAR+ETI+L++++A+   W IHQM
Sbjct: 395  KVKLNSKGEVAKYKARLVAKGFLQRQGLDYDEVFAPVARLETIRLVVSMASYHCWPIHQM 454

Query: 151  DVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            DVKSAFLNG LEE VFV QPPGF  +G + +VYRL KALYGLKQAPRAWN
Sbjct: 455  DVKSAFLNGPLEEEVFVSQPPGFEIKGKKKQVYRLHKALYGLKQAPRAWN 504


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  377 bits (968), Expect = e-117
 Identities = 199/357 (55%), Positives = 248/357 (69%), Gaps = 8/357 (2%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P   W EAV+C+VYLLNRSPTKS+   TP EAWSG KP V HL+VFGSIA+AH+P E R 
Sbjct: 652  PKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRN 711

Query: 868  KLDDRVEKTVLIGYKQG--GYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY     GYKL+NP TKK I+SR++ F EE  W W+  ++E+      
Sbjct: 712  KLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWN--SNEEDYNFFP 769

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLP---QIPAES--RRPR-RQIQQPVHLQDYEVTFN 533
            +  EE+   PT  E PS   T   + P   QI   S  R PR R IQ+      YEVT  
Sbjct: 770  H-FEEDKPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL-----YEVT-- 821

Query: 532  AEIDNDEKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKA 353
               +N E L  F   A+ EP+ F+EAI+   W  AM+EEI +I++N+TWELT +P G+KA
Sbjct: 822  ---ENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKA 878

Query: 352  IDVKWVFKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQK 173
            I VKWV+K +  S G+VERYKARLVAKG+ QR G DY E+F+ VAR+ET++L+I+LAAQ 
Sbjct: 879  IGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQN 938

Query: 172  QWKIHQMDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            +WKIHQMDVKSAFLNG LEE V+++QP G+I +G EDKV RLKK LYGLKQAPRAWN
Sbjct: 939  KWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWN 995


>gb|KYP58997.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 946

 Score =  370 bits (949), Expect = e-117
 Identities = 190/344 (55%), Positives = 241/344 (70%), Gaps = 2/344 (0%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P  FW EAVS +VY+LNR PTKS+ + TP EAWSG KP+++HLK+FG IAYAH+P + R 
Sbjct: 618  PREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKIFGCIAYAHVPDQLRK 677

Query: 868  KLDDRVEKTVLIGYKQGG--YKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY      YKL+NPVTKKVI+SRDVTF EE  W W     ++    ++
Sbjct: 678  KLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMWDWSFKAQKEP---VI 734

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAEIDND 515
                 E E+  +N  P             P  S RP+RQ + P  L+DY V  N    +D
Sbjct: 735  NPENYEEENGHVNPTPDE-----------PETSSRPQRQRRLPARLEDY-VVGNDNDPSD 782

Query: 514  EKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVKWV 335
            E++++FA  AD EPVTFEEA  N  W KAM+EEI AIE+N TWELTD+P   + I VKWV
Sbjct: 783  EEIINFALFADCEPVTFEEASNNQHWRKAMDEEIHAIEKNQTWELTDLPADKRPIGVKWV 842

Query: 334  FKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKIHQ 155
            +K + KS+G+++R KARLVAKG++Q+ G DY EVF+ VAR++TI +LI+L+AQ  WKIHQ
Sbjct: 843  YKTKYKSSGEIDRLKARLVAKGYKQKPGIDYFEVFAPVARLDTIHMLISLSAQNNWKIHQ 902

Query: 154  MDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLK 23
            MDVKSAFLNGTLEE V+V+Q  G+  +G EDKVYRLKKALYGLK
Sbjct: 903  MDVKSAFLNGTLEEEVYVEQSAGYEVKGKEDKVYRLKKALYGLK 946


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  377 bits (967), Expect = e-117
 Identities = 200/357 (56%), Positives = 250/357 (70%), Gaps = 8/357 (2%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P   W EAV+C+VYLLNRSPTKS+   TP EAWSG KP V HL+VFGSIA+AH+P E R+
Sbjct: 652  PKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRS 711

Query: 868  KLDDRVEKTVLIGYKQG--GYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY     GYKL+NP TKK I+SR++ F EE  W W+  ++E+      
Sbjct: 712  KLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWN--SNEEDYNFFP 769

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLP---QIPAES--RRPR-RQIQQPVHLQDYEVTFN 533
            +  E+E E PT  E PS   T   + P   QI   S  R PR R IQ+      YEVT  
Sbjct: 770  HFEEDEPE-PTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL-----YEVT-- 821

Query: 532  AEIDNDEKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKA 353
               +N E L  F   A+ EP+ F++AI+   W  AM+EEI +I++N+TWELT +P G+KA
Sbjct: 822  ---ENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKA 878

Query: 352  IDVKWVFKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQK 173
            I VKWV+K +  S G+VERYKARLVAKG+ QR G DY EVF+ VAR+ET++L+I+LAAQ 
Sbjct: 879  IGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQN 938

Query: 172  QWKIHQMDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            +WKIHQMDVKSAFLNG LEE V+++QP G+I +G EDKV RLKK LYGLKQAPRAWN
Sbjct: 939  KWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWN 995


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  377 bits (967), Expect = e-117
 Identities = 200/357 (56%), Positives = 250/357 (70%), Gaps = 8/357 (2%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P   W EAV+C+VYLLNRSPTKS+   TP EAWSG KP V HL+VFGSIA+AH+P E R+
Sbjct: 652  PKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRS 711

Query: 868  KLDDRVEKTVLIGYKQG--GYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY     GYKL+NP TKK I+SR++ F EE  W W+  ++E+      
Sbjct: 712  KLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWN--SNEEDYNFFP 769

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLP---QIPAES--RRPR-RQIQQPVHLQDYEVTFN 533
            +  E+E E PT  E PS   T   + P   QI   S  R PR R IQ+      YEVT  
Sbjct: 770  HFEEDEPE-PTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL-----YEVT-- 821

Query: 532  AEIDNDEKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKA 353
               +N E L  F   A+ EP+ F++AI+   W  AM+EEI +I++N+TWELT +P G+KA
Sbjct: 822  ---ENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKA 878

Query: 352  IDVKWVFKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQK 173
            I VKWV+K +  S G+VERYKARLVAKG+ QR G DY EVF+ VAR+ET++L+I+LAAQ 
Sbjct: 879  IGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQN 938

Query: 172  QWKIHQMDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            +WKIHQMDVKSAFLNG LEE V+++QP G+I +G EDKV RLKK LYGLKQAPRAWN
Sbjct: 939  KWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWN 995


>gb|KYP68042.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 999

 Score =  369 bits (946), Expect = e-116
 Identities = 180/350 (51%), Positives = 245/350 (70%), Gaps = 1/350 (0%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P   WGEAVS + Y+LNRSP+K +  +TP EAWSG KPNV H +VFGSI Y H+P + R 
Sbjct: 641  PKYLWGEAVSTTTYILNRSPSKRLEGVTPEEAWSGNKPNVSHFRVFGSICYRHVPDQLRR 700

Query: 868  KLDDRVEKTVLIGY-KQGGYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIVY 692
            KLDD+ E+ VL+GY K GGYKL NP++K++++SRDV F E   W W   +  D +   V 
Sbjct: 701  KLDDKGEQMVLLGYHKTGGYKLLNPISKQIVISRDVVFDESRRWNWK--SSSDDRYNGVV 758

Query: 691  VLEEEVESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAEIDNDE 512
            +  EE E   I+E   + S  G S+  I    RR +R  Q P   + +E+T +A ++ D 
Sbjct: 759  IDSEEAE---IDENQEVDSARGRSISPI---QRRSQRNSQVPSRFKGFEMTSDANVNEDG 812

Query: 511  KLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVKWVF 332
             +VHFA  ++VEPV+F+EAI++ +WV AM EEI ++E+N  WEL  +P+  KAI V+WVF
Sbjct: 813  DIVHFALFSEVEPVSFKEAIEDRKWVDAMTEEIRSMEKNQVWELVSLPKSKKAISVRWVF 872

Query: 331  KIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKIHQM 152
            KI+    G + +YKARLV +GF QR   DY+EVF+ VAR+ETI+ ++A+A+ + W +HQ+
Sbjct: 873  KIKTDPGGRIVKYKARLVVRGFLQRPDIDYKEVFAPVARIETIRTVVAIASSRGWTLHQL 932

Query: 151  DVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            D+KSAFLNG LEE V+V QPPGFI +G E+KV++ KKALYGLKQAPRAWN
Sbjct: 933  DIKSAFLNGPLEEEVYVLQPPGFIIEGQEEKVFKSKKALYGLKQAPRAWN 982


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  374 bits (961), Expect = e-116
 Identities = 200/357 (56%), Positives = 249/357 (69%), Gaps = 8/357 (2%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P   W EAV+C+VYLLNRSPTKS+   TP EAWSG K  V HL+VFGSIA+AH+P E R+
Sbjct: 652  PKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRS 711

Query: 868  KLDDRVEKTVLIGYKQG--GYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY     GYKL+NP TKK I+SR++ F EE  W W+  ++E+      
Sbjct: 712  KLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWN--SNEEDYNFFP 769

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLP---QIPAES--RRPR-RQIQQPVHLQDYEVTFN 533
            +  E+E E PT  E PS   T   + P   QI   S  R PR R IQ+      YEVT  
Sbjct: 770  HFEEDEPE-PTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL-----YEVT-- 821

Query: 532  AEIDNDEKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKA 353
               +N E L  F   A+ EP+ F+EAI+   W  AM+EEI +I++N+TWELT +P G+K 
Sbjct: 822  ---ENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKT 878

Query: 352  IDVKWVFKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQK 173
            I VKWV+K +  S G+VERYKARLVAKG+ QR G DY EVF+ VAR+ET++L+I+LAAQ 
Sbjct: 879  IGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQN 938

Query: 172  QWKIHQMDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            +WKIHQMDVKSAFLNG LEE V+++QP G+I +G EDKV RLKKALYGLKQAPRAWN
Sbjct: 939  KWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWN 995


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  373 bits (958), Expect = e-116
 Identities = 199/357 (55%), Positives = 247/357 (69%), Gaps = 8/357 (2%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P   W EAV+C+VYLLNRSPTKS+   TP EAWSG KP V HL+VFGSIA+AH+P E R+
Sbjct: 591  PKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRS 650

Query: 868  KLDDRVEKTVLIGYKQG--GYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY     GYKL+NP TKK I+SR++ F EE  W W+  ++E+      
Sbjct: 651  KLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWN--SNEEDYNFFP 708

Query: 694  YVLEEEVESPTINEVPSLSSTVG-TSLPQIPAES----RRPR-RQIQQPVHLQDYEVTFN 533
            +  E+E E PT  E PS   T   TSL     E     R PR R IQ+      YEVT  
Sbjct: 709  HFEEDEPE-PTREEPPSEEPTTRPTSLTSSQIEESSSERTPRFRSIQEL-----YEVT-- 760

Query: 532  AEIDNDEKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKA 353
               +N E L  F   A+ EP+ F+EAI+   W  AM+EEI +I++N+TWELT +P G+KA
Sbjct: 761  ---ENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKA 817

Query: 352  IDVKWVFKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQK 173
            I VKWV+K +  S G+VERYKARLVAKG+ QR G DY EVF+ VAR+ET++L+I+LAAQ 
Sbjct: 818  IGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQN 877

Query: 172  QWKIHQMDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            +WKIHQMD K AFLNG  EE V+++QP G+I +G EDKV RLKKALYGLKQAPRAWN
Sbjct: 878  KWKIHQMDFKLAFLNGDFEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWN 934


>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score =  369 bits (946), Expect = e-114
 Identities = 182/354 (51%), Positives = 250/354 (70%), Gaps = 6/354 (1%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            PN FWG+AV+C+VY+LNR+PTKS+P +TP EAW   KP+V HLKVF SIAY+HIP + R 
Sbjct: 612  PNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCDEKPSVSHLKVFRSIAYSHIPNQLRG 671

Query: 868  KLDDRVEKTVLIGYKQGG--YKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK +++GY +    Y+L+NPV++K+I++RDV F E+E+W W+ D  E      V
Sbjct: 672  KLDDKSEKCIMVGYNENSKAYRLYNPVSRKIIINRDVIFSEDESWNWNDDVDEAKSPFHV 731

Query: 694  YVLEEEV----ESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAE 527
             + E EV    E   I  V S SS+  +S        RR  R IQ        E+  N  
Sbjct: 732  NINENEVAQELEQAKIQAVESSSSSTSSSTSNDEISPRR-MRSIQ--------EIYNNTN 782

Query: 526  IDNDEKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAID 347
              N +   +FA  A V PVTF+EAIQ+ +W  AM++EI AI RN TWEL ++P   +A+ 
Sbjct: 783  RINVDHFANFALFAGVGPVTFDEAIQDEKWKIAMDQEIDAIRRNETWELMELPTNKQALG 842

Query: 346  VKWVFKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQW 167
            VKWV++ ++KS+G+VE YKARLV KG++Q +G DY+E+F+ V R+ETI+L+++LAAQ  W
Sbjct: 843  VKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGVDYEEIFAPVTRIETIRLILSLAAQNGW 902

Query: 166  KIHQMDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAW 5
            K+HQMD+KSAFLNG L++ +FV QP G++++G E+KVY+LKKALYGLKQAPRAW
Sbjct: 903  KVHQMDIKSAFLNGHLKDEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAW 956


>gb|AIC77183.1| polyprotein [Gossypium barbadense]
          Length = 1369

 Score =  370 bits (949), Expect = e-114
 Identities = 183/353 (51%), Positives = 244/353 (69%), Gaps = 4/353 (1%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P +FW EAV C+VYLLN+ PTKS+ + TP EAWSG KP V HLK+FG IAYAH+P + R 
Sbjct: 669  PRTFWAEAVECAVYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQRK 728

Query: 868  KLDDRVEKTVLIGY--KQGGYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDDR EK + IGY  +   Y+L+NP+TKK+I+SRDV F E + W+W      + +K++ 
Sbjct: 729  KLDDRGEKCIFIGYDKRSKAYRLYNPLTKKLIISRDVEFDEADYWRWS-----EEEKKVE 783

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAE--ID 521
             +   E ++    E      + GT+ P  P  S       + P   +     +N+   ++
Sbjct: 784  GLFFNEDDNN--QEEQGDDQSPGTTAPSSPTSSSGSSSLDEAPTRTRSLNDIYNSTEPVE 841

Query: 520  NDEKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVK 341
                   F  + + +PVT+EEAI+N +W KAM+EEI AI RN+TWELT +P+G+  I VK
Sbjct: 842  TQFDYSLFCLMTECDPVTYEEAIENNKWKKAMDEEIAAIRRNDTWELTSLPEGHSPIGVK 901

Query: 340  WVFKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKI 161
            WV+K +    G VE+YKARLVAKG++QR G DY E+F+ VAR++TI+LLIA+AAQ +WKI
Sbjct: 902  WVYKTKTNKEGKVEKYKARLVAKGYKQRQGVDYDEIFAPVARIDTIRLLIAVAAQYKWKI 961

Query: 160  HQMDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            +QMDVKSAFLNG LEE V+++QPPG+  QG EDKVYRLKK+LYGLKQAPRAWN
Sbjct: 962  YQMDVKSAFLNGYLEEEVYIEQPPGYSIQGKEDKVYRLKKSLYGLKQAPRAWN 1014


>ref|XP_013688817.1| PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
            napus]
          Length = 2682

 Score =  371 bits (953), Expect = e-113
 Identities = 191/351 (54%), Positives = 239/351 (68%), Gaps = 2/351 (0%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P   W EAV+C+VY+ NRSPTKS+   TP EAWSG KP V HL+VFGSIA+AH+P E R+
Sbjct: 1999 PKELWAEAVACAVYISNRSPTKSVLEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRS 2058

Query: 868  KLDDRVEKTVLIGYKQG--GYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY     GYKL+NP TKK I+SR+V F EE  W W   ++ +      
Sbjct: 2059 KLDDKSEKYIFIGYDANSKGYKLYNPETKKTIISRNVIFDEEGEWDWR--SNNEDYNFFP 2116

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAEIDND 515
               EE VE P        +S   +S     +  R PR +  Q +    YEVT     +N 
Sbjct: 2117 SFEEENVEQPREEPATPPTSPTTSSQGDESSSERTPRFRSLQDI----YEVT-----ENQ 2167

Query: 514  EKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVKWV 335
            + L  F   AD EP+ FEEA +   W  AM+EEI +I++N+TWEL  +P G+KAI VKWV
Sbjct: 2168 DNLTLFCLFADCEPMNFEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWV 2227

Query: 334  FKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKIHQ 155
            +K +  S G+VERYKARLVAKG+ QR G DY EVF+ VAR+ET++L+I+LAAQK W+IHQ
Sbjct: 2228 YKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQ 2287

Query: 154  MDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            MDVKSAFLNG LEE V+++QP G+I +G EDKV RLKKALYGLKQAPRAWN
Sbjct: 2288 MDVKSAFLNGDLEEEVYIEQPQGYIVEGEEDKVLRLKKALYGLKQAPRAWN 2338



 Score =  371 bits (952), Expect = e-113
 Identities = 191/351 (54%), Positives = 239/351 (68%), Gaps = 2/351 (0%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P   W EAV+C+VY+ NRSPTKS+   TP EAWSG KP V HL+VFGSIA+AH+P E R+
Sbjct: 660  PKELWAEAVACAVYISNRSPTKSVLEKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRS 719

Query: 868  KLDDRVEKTVLIGYKQG--GYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDD+ EK + IGY     GYKL+NP TKK I+SR+V F EE  W W   ++ +      
Sbjct: 720  KLDDKSEKYIFIGYDANSKGYKLYNPETKKTIISRNVIFDEEGEWDWR--SNNEDYNFFP 777

Query: 694  YVLEEEVESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAEIDND 515
               EE VE P        +S   +S     +  R PR +  Q +    YEVT     +N 
Sbjct: 778  SFEEENVEQPREEPATPPTSPTTSSQGDESSSERTPRFRSLQDI----YEVT-----ENQ 828

Query: 514  EKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVKWV 335
            + L  F   AD EP+ FEEA +   W  AM+EEI +I++N+TWEL  +P G+KAI VKWV
Sbjct: 829  DNLTLFCLFADCEPMNFEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWV 888

Query: 334  FKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKIHQ 155
            +K +  S G+VERYKARLVAKG+ QR G DY EVF+ VAR+ET++L+I+LAAQK W+IHQ
Sbjct: 889  YKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQ 948

Query: 154  MDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            MDVKSAFLNG LEE V+++QP G+I +G EDKV RLKKALYGLKQAPRAWN
Sbjct: 949  MDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWN 999


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
            copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  360 bits (924), Expect = e-113
 Identities = 195/356 (54%), Positives = 249/356 (69%), Gaps = 7/356 (1%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P  FW EAV+C+VYL NRSPTK++ + TP EAWSG KP V HL+VFGSIAYAH+P + R 
Sbjct: 343  PKEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSGVKPRVDHLRVFGSIAYAHVPDQGRF 402

Query: 868  KLDDRVEKTVLIGYKQG--GYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIV 695
            KLDDR EK V IGY     GYKL+NP   K IVSRDV F EE  W W+    ED+     
Sbjct: 403  KLDDRSEKHVFIGYDASSKGYKLYNPNNGKTIVSRDVEFYEEGTWNWE--EKEDTYDFFP 460

Query: 694  YVLEEEVESPTINE-VPSLSSTVGTSLPQIPAE---SRRPRRQIQQPVHLQD-YEVTFNA 530
            Y  E + E+ T N+  P+LS T  T+     +E   S RPRR      ++Q+ Y+ T   
Sbjct: 461  YFEEIDEEALTPNDSTPALSPTPSTNEASSSSEGSSSERPRRMR----NIQELYDET--- 513

Query: 529  EIDNDEKLVHFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAI 350
            E+ ND     F    D +P+ F+EA+++  W +AM EEI AIE+NNTWEL+ +P+G++AI
Sbjct: 514  EVINDL----FCLFVDSKPLNFDEAMKDKRWRQAMEEEIKAIEKNNTWELSSLPKGHEAI 569

Query: 349  DVKWVFKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQ 170
             VKWVFKI+  + G+VER+KARLVAKG++Q++  DY EVF+ VAR+ETI+LLI+LAAQ +
Sbjct: 570  GVKWVFKIKKNAKGEVERHKARLVAKGYKQQYEVDYDEVFAPVARMETIRLLISLAAQMK 629

Query: 169  WKIHQMDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            W+I Q DVKSAFLNG LEE V+V+QP GF+ +G E KV +L KALYGLKQAPRAWN
Sbjct: 630  WRIFQFDVKSAFLNGYLEEDVYVEQPMGFVIEGQEGKVLKLNKALYGLKQAPRAWN 685


>gb|KYP47011.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 409

 Score =  341 bits (875), Expect = e-112
 Identities = 173/351 (49%), Positives = 235/351 (66%), Gaps = 2/351 (0%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P+S WGEA    VY+LNR PTK + ++ P EAWSG KP+V+HL++FGS+ Y H+P + R 
Sbjct: 12   PHSLWGEAAMTVVYVLNRCPTKRLGSMVPEEAWSGSKPSVKHLRIFGSLCYRHVPDQRRK 71

Query: 868  KLDDRVEKTVLIGYKQ-GGYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIVY 692
            KLDD+ E  + +GY   G YKLFNP  ++V+ SRDV F E  +W     T +   K    
Sbjct: 72   KLDDKSEAMIFVGYNSTGSYKLFNPKNQQVLFSRDVYFDESSSWAEFQSTSDIIPKTQFE 131

Query: 691  VLEEEVESPTINEVPSLSSTVGTSLPQIPAESRRPRRQIQQPVHLQDYEVTFNAEIDNDE 512
              +E++   T  EV +          +    + RP R    P+ L DY+V  ++ I  + 
Sbjct: 132  WKDEDLVGETYQEVVN---------SECQTVADRPTRVKSFPLRLSDYQVYHDSAITEEG 182

Query: 511  KLV-HFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVKWV 335
             LV H A + D+EP+TFEEAI    W  AM EE+ +IE+N+TWE+ ++PQ  K I VKWV
Sbjct: 183  DLVQHMALMTDMEPITFEEAISKEVWRSAMEEELKSIEKNDTWEMVNLPQNKKVIVVKWV 242

Query: 334  FKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKIHQ 155
            FK ++KS+G + ++KARLVAKGF Q+ G DY EVF+ VAR+ET++L++ALA+ + WK+ Q
Sbjct: 243  FKTKLKSDGSIAKHKARLVAKGFMQKEGIDYSEVFAPVARLETVRLIVALASWRNWKLWQ 302

Query: 154  MDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            +DVKSAFLNG+L+E VFV QPPGFI +G E KV RLKKALYGLKQA +AWN
Sbjct: 303  LDVKSAFLNGSLDEEVFVAQPPGFICKGKELKVLRLKKALYGLKQALKAWN 353


>gb|KYP67178.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 963

 Score =  353 bits (906), Expect = e-111
 Identities = 177/352 (50%), Positives = 241/352 (68%), Gaps = 3/352 (0%)
 Frame = -2

Query: 1048 PNSFWGEAVSCSVYLLNRSPTKSIPNITPVEAWSGFKPNVQHLKVFGSIAYAHIPAETRT 869
            P+SFWGEA   +VY+LNR PTK + ++ P EAWSG KP+V+H ++FGS+ Y H+P + R 
Sbjct: 317  PHSFWGEATMIAVYVLNRCPTKRLDSMVPEEAWSGSKPSVKHFRIFGSLCYRHVPDQRRK 376

Query: 868  KLDDRVEKTVLIGYKQ-GGYKLFNPVTKKVIVSRDVTFVEEEAWKWDVDTHEDSQKRIVY 692
            KLDD+ E  + +GY   G YKL+NP TK+V+ SRDV F E  +W        +SQ +I  
Sbjct: 377  KLDDKSEPMIFVGYNPTGSYKLYNPKTKQVLFSRDVYFDESNSWS-------ESQSKIET 429

Query: 691  VLEEEVESPTINEVPSLSSTVGTSLPQIP-AESRRPRRQIQQPVHLQDYEVTFNAEIDND 515
            V + + +     E  S+  T   ++  +  A   RP R    P  L DY+V  N  I +D
Sbjct: 430  VSKLQFDW---EENKSIGETTQETMNDVSRAVKNRPTRNRNFPSRLSDYQVYPNNAISDD 486

Query: 514  EKLV-HFAFLADVEPVTFEEAIQNPEWVKAMNEEIMAIERNNTWELTDIPQGYKAIDVKW 338
              LV H A +ADVEP++ +EAI + EW  AM EE+  IE+N+TWE+ ++PQ    IDVKW
Sbjct: 487  GDLVQHLALMADVEPISLDEAITSKEWRSAMEEELRRIEKNHTWEMVELPQNKTPIDVKW 546

Query: 337  VFKIQMKSNGDVERYKARLVAKGFEQRHGYDYQEVFSLVARVETIKLLIALAAQKQWKIH 158
            VFKI++K  G + ++KARLVAKGF QR G DY EVF+ +AR+ET++L++ALA+ + WK+ 
Sbjct: 547  VFKIKLKPYGSIAKHKARLVAKGFMQREGIDYSEVFAPIARLETVRLIVALASWRNWKLW 606

Query: 157  QMDVKSAFLNGTLEEIVFVKQPPGFIKQGSEDKVYRLKKALYGLKQAPRAWN 2
            Q+DVKSAFLNG L+E VF+ QPPGFI +G+E KV +L+KALYGLKQAPRAWN
Sbjct: 607  QLDVKSAFLNGPLDEDVFIVQPPGFISKGNEQKVLKLRKALYGLKQAPRAWN 658