BLASTX nr result
ID: Rehmannia28_contig00035588
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia28_contig00035588 (1036 letters) Database: ./nr 84,704,028 sequences; 31,038,470,784 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera] 314 2e-94 emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 309 2e-92 emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera] 303 6e-92 gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 296 5e-90 ref|XP_010532348.1| PREDICTED: uncharacterized protein LOC104808... 293 9e-90 gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposo... 299 2e-89 gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo... 296 7e-89 ref|XP_011462193.1| PREDICTED: uncharacterized protein LOC105350... 280 1e-86 gb|KYP34377.1| Retrovirus-related Pol polyprotein from transposo... 288 2e-86 ref|XP_008348733.1| PREDICTED: uncharacterized protein LOC103411... 286 4e-86 gb|KYP38661.1| Retrovirus-related Pol polyprotein from transposo... 284 5e-86 gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo... 286 2e-85 emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 276 4e-85 dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 281 4e-85 gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 288 9e-85 ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotei... 280 2e-84 gb|KYP54918.1| Retrovirus-related Pol polyprotein from transposo... 271 2e-84 ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794... 284 7e-84 ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotei... 280 1e-83 gb|KYP41280.1| Retrovirus-related Pol polyprotein from transposo... 267 2e-83 >emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera] Length = 1243 Score = 314 bits (805), Expect = 2e-94 Identities = 171/313 (54%), Positives = 206/313 (65%), Gaps = 13/313 (4%) Frame = -1 Query: 1030 DIFSKFVLPLPIESDTHFPSSQHTSTSNPV-----TTRSGRVSKPPHYLNEYVCXXXXXX 866 D+F VLP + S S P ++R RVSK P YL +Y C Sbjct: 653 DLFHDRVLPCIAADNDQSSSVLPRVVSQPPLQVAPSSRXTRVSKQPSYLKDYHCSLINSV 712 Query: 865 XXXXXXXXS--------YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDA 710 S YDKLSPS+++F+L+++ I E SF++A IPEWRAAM EL+A Sbjct: 713 AHVETHSTSHPIQHFLSYDKLSPSYKLFSLSVSIISEPSSFAKAAEIPEWRAAMDCELEA 772 Query: 709 LVANNTWTLTTLPPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFS 530 L N TW++ +L GK+ VGCKW Y I + +DG+IERYKAR VAKGYTQ+EGIDY DTFS Sbjct: 773 LEENKTWSIVSLXVGKHPVGCKWVYKIKHKADGTIERYKARLVAKGYTQREGIDYVDTFS 832 Query: 529 PVAKLTTVKLLFAIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPST 350 PVAKL TVKLL AIAAVKGWHL LDVNNAFLHGDL EEVYM LPPG +GE S P + Sbjct: 833 PVAKLVTVKLLLAIAAVKGWHLSQLDVNNAFLHGDLNEEVYMKLPPGYNRKGE-SLPSNA 891 Query: 349 VCKLQKSLYGLKQASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIV 170 VC L KSLYGLKQASRQW +KF++A+ GF QS DHSLF F+AL+VYVDD++ Sbjct: 892 VCLLHKSLYGLKQASRQWFSKFSTAIMGLGFSQSPSDHSLFIKNVDGLFIALLVYVDDVI 951 Query: 169 LASNDMQAITHLK 131 +ASN+ AI LK Sbjct: 952 IASNNQGAIADLK 964 Score = 58.2 bits (139), Expect = 1e-05 Identities = 28/44 (63%), Positives = 35/44 (79%) Frame = -2 Query: 135 LKEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELL 4 LK L+ FKLKDLG +K+FLGLE+A++S GI V QRKY L+LL Sbjct: 963 LKSELNKLFKLKDLGDVKYFLGLEIAKSSTGICVSQRKYVLDLL 1006 >emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] Length = 1288 Score = 309 bits (792), Expect = 2e-92 Identities = 169/313 (53%), Positives = 204/313 (65%), Gaps = 13/313 (4%) Frame = -1 Query: 1030 DIFSKFVLPLPIESDTHFPSSQHTSTSNPV-----TTRSGRVSKPPHYLNEYVCXXXXXX 866 D+F VLP + S S P ++R RVSK P YL +Y C Sbjct: 699 DLFHDRVLPCIAADNDQSSSVLPRVVSQPPLQVAPSSRPTRVSKQPSYLKDYHCSLINSV 758 Query: 865 XXXXXXXXS--------YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDA 710 S YDKLSPS+++F+L+++ I E SF++A IPEWRAAM EL+A Sbjct: 759 AHVETHSTSHPIQHFLSYDKLSPSYKLFSLSVSIISEPSSFAKAAEIPEWRAAMDCELEA 818 Query: 709 LVANNTWTLTTLPPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFS 530 L N T ++ +LP GK+ VGCKW Y + DG+IERYKAR VAKGYTQ+EGIDY DTFS Sbjct: 819 LEENKTXSIVSLPVGKHPVGCKWVYKXKHKXDGTIERYKARLVAKGYTQREGIDYVDTFS 878 Query: 529 PVAKLTTVKLLFAIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPST 350 PVAKL TVKLL AIAAVKGWHL LDVNNAFLHGDL EEVYM LPPG +GE S P + Sbjct: 879 PVAKLVTVKLLLAIAAVKGWHLSQLDVNNAFLHGDLNEEVYMKLPPGYNRKGE-SLPSNX 937 Query: 349 VCKLQKSLYGLKQASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIV 170 VC L KSLYGLKQASRQW +KF++A+ GF QS DHSLF F+A++VYVDD++ Sbjct: 938 VCLLHKSLYGLKQASRQWFSKFSTAIMGLGFSQSPSDHSLFIKNVDGLFIAJLVYVDDVI 997 Query: 169 LASNDMQAITHLK 131 +ASN+ AI LK Sbjct: 998 IASNNQGAIADLK 1010 >emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera] Length = 970 Score = 303 bits (777), Expect = 6e-92 Identities = 168/297 (56%), Positives = 201/297 (67%), Gaps = 7/297 (2%) Frame = -1 Query: 1030 DIFSKFVLPLPIE---SDTHFPSSQHTSTSNPVTTRSGRVSKPPHYLNEYVCXXXXXXXX 860 D FS VLPLPI +D+ PS TS S TRS R P YL +Y C Sbjct: 463 DFFSDLVLPLPISISSNDSTNPSFSPTSLSLDHPTRSRRA---PSYLQDYHCSSTSFASQ 519 Query: 859 XXXXXXS----YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANNT 692 S Y KLS H A++S E ++++A IP+ +AAM EL AL N+T Sbjct: 520 STCHPLSQVLDYHKLSTPHTTLVNAISSNFEPTTYAEAAVIPKLQAAMSEELRALKENST 579 Query: 691 WTLTTLPPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKLT 512 W+LTTLPPGK+ VGCKW Y I Y + G+IERYKAR VAKGYTQQEG+DY DTFSPVAKL Sbjct: 580 WSLTTLPPGKHTVGCKWVYRIKYRAYGTIERYKARLVAKGYTQQEGVDYLDTFSPVAKLV 639 Query: 511 TVKLLFAIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQK 332 TVK+L +AAV GW L LDVNN FLHGDL E+VYM+LPPGL +GE S P +TVCKL K Sbjct: 640 TVKVLLTLAAVHGWSLTQLDVNNTFLHGDLHEKVYMSLPPGLYHEGE-SLPINTVCKLHK 698 Query: 331 SLYGLKQASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLAS 161 SLYGLKQASRQW +KF+S L + FKQ A D+SLF I G+SF+AL+VYVDDI++A+ Sbjct: 699 SLYGLKQASRQWFSKFSSVLVSTCFKQLASDNSLFVKINGNSFIALLVYVDDIIIAN 755 >gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana] Length = 1413 Score = 296 bits (758), Expect(2) = 5e-90 Identities = 156/299 (52%), Positives = 200/299 (66%), Gaps = 6/299 (2%) Frame = -1 Query: 1036 EHDIFSKFVLPLPIESDTHFPSS----QHTSTSN-PVTTRSGRVSKPPHYLNEYVCXXXX 872 E++ S F + ++ + PS Q TS SN P ++ RVS+PP YL +Y C Sbjct: 823 ENEESSVFFPHIYVDRNDSHPSQPLPVQETSASNVPAEKQNSRVSRPPAYLKDYHCNSVT 882 Query: 871 XXXXXXXXXXS-YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANN 695 Y LS + +F A+ I E H+++QA I EW AM E+ AL N Sbjct: 883 SSTDHPISEVLSYSSLSDPYMIFINAVNKIPEPHTYAQARQIKEWCDAMGMEITALEDNG 942 Query: 694 TWTLTTLPPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKL 515 TW + +LP GK AVGCKW Y I ++DGS+ERYKAR VAKGYTQ EG+DY DTFSPVAKL Sbjct: 943 TWVVCSLPVGKKAVGCKWVYKIKLNADGSLERYKARLVAKGYTQTEGLDYVDTFSPVAKL 1002 Query: 514 TTVKLLFAIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQ 335 TTVKLL A+AA KGW L LD++NAFL+G L EE+YMTLPPG + SFPP+ VC+L+ Sbjct: 1003 TTVKLLIAVAAAKGWSLSQLDISNAFLNGSLDEEIYMTLPPGYSPRQGDSFPPNAVCRLK 1062 Query: 334 KSLYGLKQASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLASN 158 KSLYGLKQASRQW KF+ +L A GF QS+GDH+LFT +S++A++VYVDDI++AS+ Sbjct: 1063 KSLYGLKQASRQWYLKFSESLKALGFTQSSGDHTLFTRKSKNSYMAVLVYVDDIIIASS 1121 Score = 64.3 bits (155), Expect(2) = 5e-90 Identities = 28/45 (62%), Positives = 38/45 (84%) Frame = -2 Query: 138 ILKEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELL 4 +L++ L KL+DLGTL++FLGLE+ARN+ GI++CQRKY LELL Sbjct: 1128 LLRDALQRSSKLRDLGTLRYFLGLEIARNTDGISICQRKYTLELL 1172 >ref|XP_010532348.1| PREDICTED: uncharacterized protein LOC104808371 [Tarenaya hassleriana] Length = 1788 Score = 293 bits (750), Expect(2) = 9e-90 Identities = 155/302 (51%), Positives = 193/302 (63%), Gaps = 14/302 (4%) Frame = -1 Query: 994 ESDTHFPSSQHTSTSN-PV------TTRSGRVSKPPHYLNEYVCXXXXXXXXXXXXXXS- 839 E T PS++ S N PV +R R K P YL++Y C Sbjct: 666 EHQTVAPSAETPSAGNLPVFPEQRPESRPKRNVKAPGYLSQYYCNSTHHDSQAIFSTPYP 725 Query: 838 ------YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANNTWTLTT 677 YD +SP ++ F L L + E SF +A+ P+W AM+TE+ AL N TW++ + Sbjct: 726 MSSVLTYDHISPEYKQFLLNLHTDIEPKSFKEAILSPQWTQAMETEIQALTDNGTWSIVS 785 Query: 676 LPPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKLTTVKLL 497 LP K VGCKW Y + +SDG++ERYKAR VAKG+TQQEGIDY DTFSPVAKL TVKLL Sbjct: 786 LPQSKKPVGCKWVYKVKRNSDGTVERYKARLVAKGFTQQEGIDYEDTFSPVAKLVTVKLL 845 Query: 496 FAIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQKSLYGL 317 A+AA+K W L +DV NAFLHGDL E++YM+LPPG Q+ P + VCKLQKSLYGL Sbjct: 846 LALAAIKNWSLTQMDVTNAFLHGDLDEDIYMSLPPGYTPPVGQNLPKNAVCKLQKSLYGL 905 Query: 316 KQASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLASNDMQAITH 137 KQASRQW KF+S L GF QS DH+LF +GD F AL+VYVDDIV+A ND +A+ + Sbjct: 906 KQASRQWYRKFSSVLINSGFTQSQADHTLFVKKQGDVFTALLVYVDDIVIAGNDDRAVQN 965 Query: 136 LK 131 LK Sbjct: 966 LK 967 Score = 66.6 bits (161), Expect(2) = 9e-90 Identities = 30/45 (66%), Positives = 39/45 (86%) Frame = -2 Query: 135 LKEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELLD 1 LK+ L+ F +KDLG L++FLGLE+AR+SKGIA+CQRKY LELL+ Sbjct: 966 LKDTLNQHFNIKDLGPLRYFLGLEIARSSKGIALCQRKYCLELLN 1010 >gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 1097 Score = 299 bits (765), Expect = 2e-89 Identities = 161/310 (51%), Positives = 199/310 (64%), Gaps = 16/310 (5%) Frame = -1 Query: 1006 PLPIESDTHFPSSQHTSTSNPVTT--------RSGRVSKPPHYLNEYV--------CXXX 875 PLPI++D S+ T TS+PV+ +S R K P YL++Y Sbjct: 550 PLPIDTDPTPLSTNTTPTSSPVSVVPPPPFVQKSTRPRKLPSYLHDYHHTLLTTHNSPTI 609 Query: 874 XXXXXXXXXXXSYDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANN 695 SY LSPS + F+L+++SIKE +S+ +A+ W+ A+QTEL AL NN Sbjct: 610 SQPLYSIHNHISYSNLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAIQTELTALEKNN 669 Query: 694 TWTLTTLPPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKL 515 TW LT LPP K VGCKW + + ++SDG+IER+KAR VAKGYTQ EG+DY DTFSPV K+ Sbjct: 670 TWILTPLPPNKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTEGLDYLDTFSPVVKM 729 Query: 514 TTVKLLFAIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQ 335 TTV+ L A+A K WH+ LDVN FLHGDL EEVYMT PPGL QS + VCKL Sbjct: 730 TTVRTLLAVATAKNWHIHQLDVNTTFLHGDLHEEVYMTPPPGLTVSPHQS---NCVCKLV 786 Query: 334 KSLYGLKQASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLASND 155 KSLYGLKQASRQWNAK TS L GFKQS D+SLFT G F A++VYVDD+VLA ND Sbjct: 787 KSLYGLKQASRQWNAKLTSVLIDSGFKQSMADYSLFTKQFGAKFTAILVYVDDLVLAGND 846 Query: 154 MQAITHLKRI 125 I ++K + Sbjct: 847 PTEINYIKSL 856 Score = 59.7 bits (143), Expect = 3e-06 Identities = 27/45 (60%), Positives = 37/45 (82%) Frame = -2 Query: 135 LKEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELLD 1 +K L +F +KDLG LK+FLG+EVAR+S GIA+ QRKYAL+L++ Sbjct: 853 IKSLLDQKFTIKDLGQLKYFLGMEVARSSTGIALYQRKYALDLIE 897 >gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 1002 Score = 296 bits (757), Expect = 7e-89 Identities = 160/310 (51%), Positives = 198/310 (63%), Gaps = 16/310 (5%) Frame = -1 Query: 1006 PLPIESDTHFPSSQHTSTSNPVTT--------RSGRVSKPPHYLNEYV--------CXXX 875 PLPI++D S+ T TS+PV+ +S R K P YL++Y Sbjct: 394 PLPIDTDPTPLSTNTTPTSSPVSVVPPPPFVRKSTRPRKLPSYLHDYHHTLLTTHNSPTI 453 Query: 874 XXXXXXXXXXXSYDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANN 695 SY LSPS + F+L+++SIKE +S+ +A+ W+ A+QTEL AL NN Sbjct: 454 SQPLYSIHNHISYSNLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAIQTELTALEKNN 513 Query: 694 TWTLTTLPPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKL 515 TW LT LPP K VGCKW + + ++SDG+IER+KAR VAKGYTQ E +DY DTFSPV K+ Sbjct: 514 TWILTPLPPNKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTETLDYLDTFSPVVKM 573 Query: 514 TTVKLLFAIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQ 335 TTV+ L A+A K WH+ LDVN FLHGDL EEVYMT PPGL QS + VCKL Sbjct: 574 TTVRTLLAVATAKNWHIHQLDVNTTFLHGDLHEEVYMTPPPGLTVSPHQS---NCVCKLV 630 Query: 334 KSLYGLKQASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLASND 155 KSLYGLKQASRQWNAK TS L GFKQS D+SLFT G F A++VYVDD+VLA ND Sbjct: 631 KSLYGLKQASRQWNAKLTSVLIDSGFKQSMADYSLFTKQFGAKFTAILVYVDDLVLAGND 690 Query: 154 MQAITHLKRI 125 I ++K + Sbjct: 691 PTEINYIKSL 700 Score = 59.7 bits (143), Expect = 3e-06 Identities = 27/45 (60%), Positives = 37/45 (82%) Frame = -2 Query: 135 LKEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELLD 1 +K L +F +KDLG LK+FLG+EVAR+S GIA+ QRKYAL+L++ Sbjct: 697 IKSLLDQKFTIKDLGQLKYFLGMEVARSSTGIALYQRKYALDLIE 741 >ref|XP_011462193.1| PREDICTED: uncharacterized protein LOC105350894 [Fragaria vesca subsp. vesca] Length = 843 Score = 280 bits (715), Expect(2) = 1e-86 Identities = 140/236 (59%), Positives = 170/236 (72%) Frame = -1 Query: 838 YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANNTWTLTTLPPGKN 659 Y +LSPSHRVF L+ KE SFSQAV PEW+ AM+ E+ AL +N TW+L LPP K Sbjct: 514 YHRLSPSHRVFIANLSIHKEPASFSQAVHNPEWQTAMRAEVAALQSNGTWSLVPLPPHKR 573 Query: 658 AVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKLTTVKLLFAIAAV 479 +GCKW Y + DG++ERYKAR VAKGY+Q EG+DY +TF+PVAKLTTV++L ++A++ Sbjct: 574 PIGCKWVYKVKLKPDGNVERYKARLVAKGYSQIEGVDYRETFAPVAKLTTVRVLLSLASI 633 Query: 478 KGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQKSLYGLKQASRQ 299 +GWHL LDVNNAFLHGDL EEVYM LPPG +GE + VCKL KSLYGLKQASRQ Sbjct: 634 QGWHLHQLDVNNAFLHGDLHEEVYMKLPPGFGGKGE-----TRVCKLHKSLYGLKQASRQ 688 Query: 298 WNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLASNDMQAITHLK 131 W K + AL A GF QS D+SLF G F AL+VYVDD++LA N + IT K Sbjct: 689 WFIKLSMALKAAGFHQSWSDYSLFVRAHGSKFTALLVYVDDVILAGNSLNDITATK 744 Score = 69.3 bits (168), Expect(2) = 1e-86 Identities = 32/44 (72%), Positives = 39/44 (88%) Frame = -2 Query: 132 KEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELLD 1 K FLS +FKLKDLG LK+FLG+EVAR+ GIA+CQRKYALE+L+ Sbjct: 744 KTFLSNRFKLKDLGQLKYFLGIEVARSKSGIALCQRKYALEILE 787 >gb|KYP34377.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 938 Score = 288 bits (737), Expect = 2e-86 Identities = 152/286 (53%), Positives = 188/286 (65%), Gaps = 1/286 (0%) Frame = -1 Query: 955 TSNPVTTRSGRVSKPPHYLNEYVCXXXXXXXXXXXXXXS-YDKLSPSHRVFTLALTSIKE 779 TS P T S R +PPH+L +YVC LS H+ F + +E Sbjct: 563 TSLPPTNHSQRPRRPPHHLKDYVCNHIKSTTNFPLANYLSLSNLSNFHQPFLTNIIGNQE 622 Query: 778 SHSFSQAVTIPEWRAAMQTELDALVANNTWTLTTLPPGKNAVGCKWEYWILYSSDGSIER 599 SFSQA+ EWR AM E+ AL +NNTW+L LP GK+++GCKW Y I Y SDGSIER Sbjct: 623 PKSFSQAMKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDGSIER 682 Query: 598 YKARFVAKGYTQQEGIDYFDTFSPVAKLTTVKLLFAIAAVKGWHLVHLDVNNAFLHGDLK 419 YKA VAKGYTQ EGIDY DTF+PVAKL TV+LL +IAA+K W L LDVNNAFL GDL Sbjct: 683 YKACLVAKGYTQIEGIDYHDTFAPVAKLVTVRLLLSIAAIKNWSLHQLDVNNAFLQGDLN 742 Query: 418 EEVYMTLPPGLR*QGEQSFPPSTVCKLQKSLYGLKQASRQWNAKFTSALFARGFKQSAGD 239 EEVYM LPPG +GE + VCKL KS+YGLKQASRQW +KF++ L RGF+QS D Sbjct: 743 EEVYMKLPPGFSRKGE-----TYVCKLHKSIYGLKQASRQWFSKFSTTLIQRGFRQSISD 797 Query: 238 HSLFTLIEGDSFVALVVYVDDIVLASNDMQAITHLKRISFCSVQIE 101 +SLFT I G + V ++VY+DDI++ N+ AI ++K+ S I+ Sbjct: 798 YSLFTYISGQTSVFVLVYIDDIIITGNNDDAIFNIKQFLAQSFSIK 843 Score = 59.3 bits (142), Expect = 4e-06 Identities = 24/44 (54%), Positives = 36/44 (81%) Frame = -2 Query: 135 LKEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELL 4 +K+FL+ F +KDLG L++FL +EV+R+ KGI +CQRKY L++L Sbjct: 832 IKQFLAQSFSIKDLGNLRYFLAIEVSRSKKGIFLCQRKYTLDIL 875 >ref|XP_008348733.1| PREDICTED: uncharacterized protein LOC103411898, partial [Malus domestica] Length = 897 Score = 286 bits (733), Expect = 4e-86 Identities = 144/254 (56%), Positives = 184/254 (72%) Frame = -1 Query: 838 YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANNTWTLTTLPPGKN 659 Y LSPSHR F A++++ E +F QA P+WRA M +EL AL NNTWTLTTLPPG Sbjct: 633 YAHLSPSHRSFACAISTLVEPTTFPQANGDPQWRAVMDSELLALEQNNTWTLTTLPPGHR 692 Query: 658 AVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKLTTVKLLFAIAAV 479 A+GCKW Y I Y+SDG+IERYKAR VAKG+TQ+EGIDY +TF+PVAKL TV+ L A+A+V Sbjct: 693 AIGCKWVYKIKYNSDGTIERYKARLVAKGFTQREGIDYKETFAPVAKLITVRCLLAVASV 752 Query: 478 KGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQKSLYGLKQASRQ 299 + W L +DV+NAFLHGDL EEVYM LPPGL QGE + VC+L KSLYGLKQASR Sbjct: 753 RHWSLHQMDVHNAFLHGDLCEEVYMQLPPGLHRQGEHN-----VCRLNKSLYGLKQASRS 807 Query: 298 WNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLASNDMQAITHLKRISF 119 W KF++A+ G++QS D+SLFT + G+SF A+++YVDD+++ ND AI LK+ Sbjct: 808 WFHKFSTAISQAGYQQSMADYSLFTKVRGNSFTAVLLYVDDMIITGNDEAAIHDLKQFLQ 867 Query: 118 CSVQIERPWYIKIF 77 I+ ++K F Sbjct: 868 SHFSIKDLGHLKYF 881 >gb|KYP38661.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 778 Score = 284 bits (726), Expect = 5e-86 Identities = 151/296 (51%), Positives = 189/296 (63%), Gaps = 1/296 (0%) Frame = -1 Query: 961 TSTSNPVTTRSGRVSKPPHYLNEYVCXXXXXXXXXXXXXXS-YDKLSPSHRVFTLALTSI 785 T TS P T S +PPH+L +YVC LS SH+ F + Sbjct: 275 TETSLPPTNHSQHPRRPPHHLKDYVCNHIKSITNFPLANYLSLSNLSNSHQAFLTNIIDN 334 Query: 784 KESHSFSQAVTIPEWRAAMQTELDALVANNTWTLTTLPPGKNAVGCKWEYWILYSSDGSI 605 +E SFSQA+ EWR AM E+ AL +NNTW+L LP GK+++GCKW Y I Y SDGSI Sbjct: 335 QEPKSFSQAMKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDGSI 394 Query: 604 ERYKARFVAKGYTQQEGIDYFDTFSPVAKLTTVKLLFAIAAVKGWHLVHLDVNNAFLHGD 425 ERYKAR VAKGY Q EGIDY DTF+PVAKL V+LL +IAA+K W L LDVNN FL GD Sbjct: 395 ERYKARLVAKGYAQIEGIDYHDTFAPVAKLVIVRLLLSIAAIKNWSLHQLDVNNDFLQGD 454 Query: 424 LKEEVYMTLPPGLR*QGEQSFPPSTVCKLQKSLYGLKQASRQWNAKFTSALFARGFKQSA 245 L EEVYM LPP +GE + VCKL K +YGLKQASRQW +KF++ + RGF+QS Sbjct: 455 LNEEVYMKLPPRFSRKGE-----TYVCKLHKFIYGLKQASRQWFSKFSTTIIQRGFRQSI 509 Query: 244 GDHSLFTLIEGDSFVALVVYVDDIVLASNDMQAITHLKRISFCSVQIERPWYIKIF 77 D+SLFT I G + V ++VYVDDI++ SN+ AI ++K+ S I+ ++ F Sbjct: 510 SDYSLFTYISGQTSVFVLVYVDDIIITSNNDDAIFNIKQFLAQSFSIKDHGNLRYF 565 Score = 58.9 bits (141), Expect = 5e-06 Identities = 24/44 (54%), Positives = 36/44 (81%) Frame = -2 Query: 135 LKEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELL 4 +K+FL+ F +KD G L++FLG+EV+R+ KGI +CQRKY L++L Sbjct: 546 IKQFLAQSFSIKDHGNLRYFLGIEVSRSKKGIFLCQRKYTLDIL 589 >gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 1013 Score = 286 bits (733), Expect = 2e-85 Identities = 155/314 (49%), Positives = 190/314 (60%), Gaps = 24/314 (7%) Frame = -1 Query: 1000 PIESDTHFPSSQHTSTSNPV-------------TTRSGRVSKPPHYLNEYVCXXXXXXXX 860 P + D H P S +STS P + S R+ +PP YL +Y C Sbjct: 396 PYDLDNHVPPSPTSSTSIPPEQPHQPLSPAPAPSRHSTRMRQPPSYLKDYHCSLLAPTGR 455 Query: 859 XXXXXXS-----------YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELD 713 YD SPS++ F L++++ E H+++QA W AM+TEL Sbjct: 456 INSFSGISTPHSISSTLTYDFCSPSYKQFCLSVSTNFEPHTYTQASKYDCWIMAMKTELA 515 Query: 712 ALVANNTWTLTTLPPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTF 533 AL N TW++ LP GK +GCKW Y I Y SDGSIERYKAR VAKGY+Q EG+DY DT+ Sbjct: 516 ALDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLVAKGYSQTEGLDYLDTY 575 Query: 532 SPVAKLTTVKLLFAIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPS 353 SPVAKLTTV++L A+ A+KGW L LDVNNAFLHGDL EEVYMTLPPGL + P Sbjct: 576 SPVAKLTTVRVLLALTAIKGWFLEQLDVNNAFLHGDLHEEVYMTLPPGLSVPSSSNTAPK 635 Query: 352 TVCKLQKSLYGLKQASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDI 173 VCKL KS+YGLKQASRQW +K +SAL + G+ S DHSLF F AL+VYVDDI Sbjct: 636 -VCKLHKSIYGLKQASRQWYSKLSSALISMGYSPSTADHSLFIKSSSSHFTALLVYVDDI 694 Query: 172 VLASNDMQAITHLK 131 +LA ND I +K Sbjct: 695 ILAGNDKPEIDFIK 708 >emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] Length = 1523 Score = 276 bits (707), Expect(2) = 4e-85 Identities = 139/237 (58%), Positives = 170/237 (71%) Frame = -1 Query: 838 YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANNTWTLTTLPPGKN 659 YD+LSP H+ FT+ +T KE SFSQAV WR AM TE+ AL AN TW+L LP K Sbjct: 949 YDRLSPMHKAFTVKITLAKEPRSFSQAVLDSRWREAMNTEIQALQANKTWSLVPLPSHKK 1008 Query: 658 AVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKLTTVKLLFAIAAV 479 +GCKW Y I Y+ DG+IERYKAR VAKG++Q EGIDY +TF+PVAKLTTV++L ++A++ Sbjct: 1009 PIGCKWVYKIKYNPDGTIERYKARLVAKGFSQVEGIDYRETFAPVAKLTTVRVLLSLASI 1068 Query: 478 KGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQKSLYGLKQASRQ 299 +GWHL LDVNNAFL+GDL E+VYM LPPG +GE VCKL KSLYGLKQASRQ Sbjct: 1069 QGWHLHQLDVNNAFLNGDLYEDVYMQLPPGFGRKGEH-----RVCKLHKSLYGLKQASRQ 1123 Query: 298 WNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLASNDMQAITHLKR 128 W K +SAL A GFKQS D+SLF F L+VYVDD++LA N ++ I K+ Sbjct: 1124 WFLKLSSALKAAGFKQSWSDYSLFXRNTQGRFTTLLVYVDDVILAGNSLEDIIETKQ 1180 Score = 67.8 bits (164), Expect(2) = 4e-85 Identities = 29/44 (65%), Positives = 40/44 (90%) Frame = -2 Query: 132 KEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELLD 1 K+FL++ FKLKD+G L++FLG+EVAR+ +GI +CQRKYALELL+ Sbjct: 1179 KQFLASHFKLKDMGQLRYFLGIEVARSKQGIVLCQRKYALELLE 1222 >dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1475 Score = 281 bits (718), Expect(2) = 4e-85 Identities = 148/300 (49%), Positives = 197/300 (65%), Gaps = 4/300 (1%) Frame = -1 Query: 1015 FVLPLPIESDTHFPSSQHTSTSNPVTTRSGRVSKPPHYLNEYVCXXXXXXXXXXXXXXS- 839 F L P+ + P S TS S P + S R S+PP YL +Y C + Sbjct: 880 FDLVDPVHENIENPPS--TSESAPKVS-SKRESRPPGYLQDYFCNAVPDVTKDVRYPLNA 936 Query: 838 ---YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANNTWTLTTLPP 668 Y +LS + A+ E +++QA I EW AM+ E+DAL + NTW++ +LP Sbjct: 937 YINYTQLSEEFTAYICAVNKYPEPCTYAQAKKIKEWLDAMEIEIDALESTNTWSVCSLPQ 996 Query: 667 GKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKLTTVKLLFAI 488 GK +GCKW + + ++DGS+ER+KAR VAKGYTQ+EG+DY+DTFSPVAK+TTVK L ++ Sbjct: 997 GKKPIGCKWVFKVKLNADGSLERFKARLVAKGYTQREGLDYYDTFSPVAKMTTVKTLLSV 1056 Query: 487 AAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQKSLYGLKQA 308 AA+K W L LD++NAFL+GDLKEE+YMTLPPG + P + V KLQKSLYGLKQA Sbjct: 1057 AAIKEWSLHQLDISNAFLNGDLKEEIYMTLPPGYSMKQGGVLPQNPVLKLQKSLYGLKQA 1116 Query: 307 SRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLASNDMQAITHLKR 128 SRQW KF+S L GFK+S DH+LFT I G +++AL+VYVDDIV+A N+ + I LK+ Sbjct: 1117 SRQWYLKFSSTLKKLGFKKSHADHTLFTRISGKAYIALLVYVDDIVIAGNNDENIEELKK 1176 Score = 63.5 bits (153), Expect(2) = 4e-85 Identities = 28/45 (62%), Positives = 38/45 (84%) Frame = -2 Query: 135 LKEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELLD 1 LK+ L+ FKL+DLG +K+FLGLE+AR +GI+VCQRKY +ELL+ Sbjct: 1174 LKKDLAKAFKLRDLGPMKYFLGLEIARTKEGISVCQRKYTMELLE 1218 >gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 1316 Score = 288 bits (737), Expect = 9e-85 Identities = 160/335 (47%), Positives = 203/335 (60%), Gaps = 22/335 (6%) Frame = -1 Query: 1015 FVLPLPIESD----THFPSSQHTSTSNPVTT----------RSGRVSKPPHYLNEY---- 890 F P+PI + FPSS +S+P T+ RS R +PP YL ++ Sbjct: 702 FSSPVPIHYNYVDYPTFPSSSIVESSDPPTSDQHSSPPPLRRSTRPRRPPTYLQDFHGAF 761 Query: 889 ----VCXXXXXXXXXXXXXXSYDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQT 722 SYD LSPS + +++S+ E +F++A W AM Sbjct: 762 TSTSTAHSSTGIRHPLHSFLSYDLLSPSFHHYVFSISSVTEPKNFAEASKSDSWLKAMHE 821 Query: 721 ELDALVANNTWTLTTLPPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYF 542 E+ AL ANNTW LTTLPP K A+GC+W Y + + +DGSI+RYKAR VAKGYTQ EG+D+F Sbjct: 822 EIFALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFF 881 Query: 541 DTFSPVAKLTTVKLLFAIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSF 362 DTFSPVAKLTTV+LL ++AA+ WHL LDVNNAFLHGDL EEVYM LPPGL SF Sbjct: 882 DTFSPVAKLTTVRLLLSLAAINNWHLKQLDVNNAFLHGDLNEEVYMQLPPGL----TPSF 937 Query: 361 PPSTVCKLQKSLYGLKQASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYV 182 P VC+LQ+SLYGLKQASRQW A+ +S L G+ S DHSLF + A+++YV Sbjct: 938 -PGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPATTTAILIYV 996 Query: 181 DDIVLASNDMQAITHLKRISFCSVQIERPWYIKIF 77 DDIVLA ND+ I HL + + QI+ +K F Sbjct: 997 DDIVLAGNDLTEIHHLTSLLHTTFQIKDLGNLKYF 1031 Score = 59.3 bits (142), Expect = 4e-06 Identities = 28/44 (63%), Positives = 33/44 (75%) Frame = -2 Query: 135 LKEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELL 4 L L F++KDLG LK+FLGLEVARN GI +CQRKY L+LL Sbjct: 1012 LTSLLHTTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYILDLL 1055 >ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X6 [Tarenaya hassleriana] Length = 789 Score = 280 bits (716), Expect = 2e-84 Identities = 147/311 (47%), Positives = 194/311 (62%), Gaps = 9/311 (2%) Frame = -1 Query: 1006 PLPIESDTHFPSSQHTSTSNPVTTRSGRVSKPPHYLNEYVCXXXXXXXXXXXXXXS---- 839 P+ + SS ++S+ TR R SK P YL++Y C + Sbjct: 422 PISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPAYLSDYHCYLISHNSTPHPNPVTPYPL 481 Query: 838 -----YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANNTWTLTTL 674 YD LSPS+R F L +T+ E S++QA WR AM+ EL+AL+ NTW++ TL Sbjct: 482 SACLTYDLLSPSYRTFALNITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSICTL 541 Query: 673 PPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKLTTVKLLF 494 P GKNAVGCKW + Y++DGSIER+KAR VAKGYTQ EG+D+ +TFSPVAK+TTV++L Sbjct: 542 PDGKNAVGCKWVFKTKYNADGSIERHKARLVAKGYTQLEGVDFSETFSPVAKMTTVRVLL 601 Query: 493 AIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQKSLYGLK 314 A+AA W + +DV+NAFL+GDL EE+YM LPPG + S+VCKLQ+SLYGLK Sbjct: 602 ALAAKYNWLINQMDVSNAFLNGDLDEEIYMKLPPGYSDLQGEKVSSSSVCKLQRSLYGLK 661 Query: 313 QASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLASNDMQAITHL 134 QASRQWN K + L A GF Q D+SLF G VA++VYVDD+++ ND I+ L Sbjct: 662 QASRQWNQKLSQVLLAAGFLQVQSDNSLFLKRNGSQLVAVLVYVDDLLITGNDAAMISDL 721 Query: 133 KRISFCSVQIE 101 K S +I+ Sbjct: 722 KDTLHSSFEIK 732 >gb|KYP54918.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 471 Score = 271 bits (694), Expect = 2e-84 Identities = 145/293 (49%), Positives = 186/293 (63%), Gaps = 7/293 (2%) Frame = -1 Query: 934 RSGRVSKPPHYLNEYVCXXXXXXXXXXXXXXS-------YDKLSPSHRVFTLALTSIKES 776 RS R+ P YL ++ C Y+ LS SH + L+L++ +E Sbjct: 25 RSQRIPFSPTYLKDFHCNFLTSSPQLSKGISHPLSSVINYNTLSSSHLHYVLSLSTHEEP 84 Query: 775 HSFSQAVTIPEWRAAMQTELDALVANNTWTLTTLPPGKNAVGCKWEYWILYSSDGSIERY 596 + QAV EW AM+ E+DAL ANNTWT+ L GK+ +GCKW Y I Y SDGS+ERY Sbjct: 85 KFYHQAVKSQEWVVAMKAEIDALTANNTWTIVDLTSGKHPIGCKWVYKIKYRSDGSVERY 144 Query: 595 KARFVAKGYTQQEGIDYFDTFSPVAKLTTVKLLFAIAAVKGWHLVHLDVNNAFLHGDLKE 416 KAR VAKG+TQ EG+DYF+TF+PVAKLTTV+LL A+A+ + W L LDVNNAFLHGDL+E Sbjct: 145 KARLVAKGFTQTEGLDYFETFAPVAKLTTVRLLLAVASSQTWFLHQLDVNNAFLHGDLEE 204 Query: 415 EVYMTLPPGLR*QGEQSFPPSTVCKLQKSLYGLKQASRQWNAKFTSALFARGFKQSAGDH 236 EVYMT+P QG P+ VCKL KSLYGLKQASRQW K ++ L + G+K S DH Sbjct: 205 EVYMTIP-----QGVVCSKPNQVCKLHKSLYGLKQASRQWYNKLSTCLLSFGYKHSPHDH 259 Query: 235 SLFTLIEGDSFVALVVYVDDIVLASNDMQAITHLKRISFCSVQIERPWYIKIF 77 SLFT F AL++YVDD++LA D+ I +K+ S +I+ +K F Sbjct: 260 SLFTKTANGLFTALLIYVDDLILAGTDIYEINSVKQHLHDSFRIKDLGPLKYF 312 >ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794221 [Glycine max] Length = 1150 Score = 284 bits (727), Expect = 7e-84 Identities = 157/320 (49%), Positives = 203/320 (63%), Gaps = 10/320 (3%) Frame = -1 Query: 1006 PLPIESDT---HFPSSQHTSTSNPVTTRSGRVSKPPHYLNEY-------VCXXXXXXXXX 857 PLP ES+ P++ HTS++ P R+ R+ P +Y Sbjct: 236 PLPPESEPVPIDQPNTDHTSSA-PTPRRTDRIRTRPTKYTDYQTSFTSATITNHPGTKHP 294 Query: 856 XXXXXSYDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANNTWTLTT 677 SY+KLS S+ F L +++ E S+++A W AM E+ AL NNTW LT Sbjct: 295 ISSVISYNKLSSSYHSFILNISANSEPKSYNEACKHDSWVQAMHDEISALERNNTWVLTD 354 Query: 676 LPPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKLTTVKLL 497 LP KN +GCKW Y I ++SDGSIERYKAR VAKGYTQ EG+DY DTFSPVAK+TTV+LL Sbjct: 355 LPQHKNVIGCKWVYKIKHNSDGSIERYKARLVAKGYTQIEGLDYLDTFSPVAKITTVRLL 414 Query: 496 FAIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQKSLYGL 317 A+AA+ W+L LDVNNAFLHG L EEVYM LPPG++ S P VCKLQ+SLYGL Sbjct: 415 LALAALNNWYLRQLDVNNAFLHGGLHEEVYMVLPPGMK-----SAKPGQVCKLQRSLYGL 469 Query: 316 KQASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLASNDMQAITH 137 KQASRQW A+ ++ L GFKQS D+SLFTL + +SF AL+VYVDDIVL+ ND+ I+ Sbjct: 470 KQASRQWYARLSTFLAHHGFKQSVADYSLFTLKKANSFTALLVYVDDIVLSGNDLSVISS 529 Query: 136 LKRISFCSVQIERPWYIKIF 77 + ++ + +I+ +K F Sbjct: 530 ITKLLDDTFKIKDLGNLKYF 549 Score = 60.1 bits (144), Expect = 2e-06 Identities = 27/44 (61%), Positives = 34/44 (77%) Frame = -2 Query: 135 LKEFLSAQFKLKDLGTLKFFLGLEVARNSKGIAVCQRKYALELL 4 + + L FK+KDLG LK+FLG EVAR + GI +CQRKYAL+LL Sbjct: 530 ITKLLDDTFKIKDLGNLKYFLGFEVARGTSGINICQRKYALDLL 573 >ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X5 [Tarenaya hassleriana] Length = 886 Score = 280 bits (716), Expect = 1e-83 Identities = 147/311 (47%), Positives = 194/311 (62%), Gaps = 9/311 (2%) Frame = -1 Query: 1006 PLPIESDTHFPSSQHTSTSNPVTTRSGRVSKPPHYLNEYVCXXXXXXXXXXXXXXS---- 839 P+ + SS ++S+ TR R SK P YL++Y C + Sbjct: 519 PISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPAYLSDYHCYLISHNSTPHPNPVTPYPL 578 Query: 838 -----YDKLSPSHRVFTLALTSIKESHSFSQAVTIPEWRAAMQTELDALVANNTWTLTTL 674 YD LSPS+R F L +T+ E S++QA WR AM+ EL+AL+ NTW++ TL Sbjct: 579 SACLTYDLLSPSYRTFALNITTAPEPQSYTQAAKFESWRQAMKLELEALIRTNTWSICTL 638 Query: 673 PPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGYTQQEGIDYFDTFSPVAKLTTVKLLF 494 P GKNAVGCKW + Y++DGSIER+KAR VAKGYTQ EG+D+ +TFSPVAK+TTV++L Sbjct: 639 PDGKNAVGCKWVFKTKYNADGSIERHKARLVAKGYTQLEGVDFSETFSPVAKMTTVRVLL 698 Query: 493 AIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPGLR*QGEQSFPPSTVCKLQKSLYGLK 314 A+AA W + +DV+NAFL+GDL EE+YM LPPG + S+VCKLQ+SLYGLK Sbjct: 699 ALAAKYNWLINQMDVSNAFLNGDLDEEIYMKLPPGYSDLQGEKVSSSSVCKLQRSLYGLK 758 Query: 313 QASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGDSFVALVVYVDDIVLASNDMQAITHL 134 QASRQWN K + L A GF Q D+SLF G VA++VYVDD+++ ND I+ L Sbjct: 759 QASRQWNQKLSQVLLAAGFLQVQSDNSLFLKRNGSQLVAVLVYVDDLLITGNDAAMISDL 818 Query: 133 KRISFCSVQIE 101 K S +I+ Sbjct: 819 KDTLHSSFEIK 829 >gb|KYP41280.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 395 Score = 267 bits (682), Expect = 2e-83 Identities = 130/207 (62%), Positives = 154/207 (74%) Frame = -1 Query: 748 PEWRAAMQTELDALVANNTWTLTTLPPGKNAVGCKWEYWILYSSDGSIERYKARFVAKGY 569 P W AM+ E+ AL NTW L LPPGK+ +GCKW Y I + DGSIERYKAR VAKG+ Sbjct: 7 PCWNNAMKAEITALEKTNTWILVELPPGKHPIGCKWVYKIKHKPDGSIERYKARLVAKGF 66 Query: 568 TQQEGIDYFDTFSPVAKLTTVKLLFAIAAVKGWHLVHLDVNNAFLHGDLKEEVYMTLPPG 389 TQ EGIDYF+TFSPVAK+TT ++L A+AA KGWHL LDVNNAFLHGDL EEVYM LPPG Sbjct: 67 TQLEGIDYFETFSPVAKITTFRVLLALAAAKGWHLQQLDVNNAFLHGDLDEEVYMKLPPG 126 Query: 388 LR*QGEQSFPPSTVCKLQKSLYGLKQASRQWNAKFTSALFARGFKQSAGDHSLFTLIEGD 209 L + P+ VCKLQ+SLYGLKQASRQW++K T+AL + G+ QS DHSLF G Sbjct: 127 L-----TADSPNQVCKLQRSLYGLKQASRQWHSKLTTALLSLGYTQSMADHSLFVKNTGS 181 Query: 208 SFVALVVYVDDIVLASNDMQAITHLKR 128 SF AL+VYVDDI+L D+ I H+K+ Sbjct: 182 SFTALLVYVDDILLTGTDLAEINHVKK 208