BLASTX nr result

ID: Rehmannia28_contig00034994 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00034994
         (1164 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015944203.1| PREDICTED: uncharacterized protein LOC107469...    39   5e-07
ref|XP_015964000.1| PREDICTED: replication protein A 70 kDa DNA-...    39   3e-06
dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                40   3e-06
ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-...    40   6e-06
ref|XP_009759827.1| PREDICTED: uncharacterized protein LOC104212...    43   9e-06
ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214...    43   1e-05

>ref|XP_015944203.1| PREDICTED: uncharacterized protein LOC107469336 [Arachis
           duranensis]
          Length = 459

 Score = 38.5 bits (88), Expect(3) = 5e-07
 Identities = 15/53 (28%), Positives = 31/53 (58%)
 Frame = -2

Query: 548 KEDGSSPSVELPADLKALIGNMMLFNVQIKEEQLRNYAGAFSVVKLTADQDLV 390
           K++ SS     P  L +++G  +LF + +K   ++ Y   ++V+K+  D+D+V
Sbjct: 302 KDEESSDGEGYPPTLDSMMGRRLLFKINVKASNMKQYDHVYTVMKICDDEDIV 354



 Score = 33.5 bits (75), Expect(3) = 5e-07
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -2

Query: 1010 KSGSFWVCARIIGIS---DE*WYISCTRCTKKFHPALDQLY-CIKCDH 879
            + G  W+   I+ I+   D+ +Y SC +C KK    +   Y C KC H
Sbjct: 212  QEGPIWIAGTIVSINAGKDDWFYKSCRKCPKKVETPIGNRYECGKCGH 259



 Score = 30.0 bits (66), Expect(3) = 5e-07
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -1

Query: 762 KYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQK 649
           ++ + + V D + S  LL WDRE  Q+ G+   +++ +
Sbjct: 267 RFKVEVLVYDGTGSIMLLMWDRETAQLCGRQAEQIKDE 304


>ref|XP_015964000.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
            [Arachis duranensis]
          Length = 535

 Score = 38.5 bits (88), Expect(3) = 3e-06
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
 Frame = -2

Query: 1025 VFLTFKSGSFWVCARIIGIS---DE*WYISCTRCTKKFHPALDQLY-CIKCDH 879
            V +  + G  W+ A I+ I+   D+ +Y SC +C KK    +   Y C KCDH
Sbjct: 283  VLIQHEEGPAWIAASIVAINVTKDDWFYKSCRKCPKKVETPIGNRYECGKCDH 335



 Score = 32.3 bits (72), Expect(3) = 3e-06
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = -2

Query: 545 EDGSSPSVELPADLKALIGNMMLFNVQIKEEQLRNYAGAFSVVKLTADQDLVWK 384
           ED      E P  L  ++   +LF + IKE  +  +   ++V+K+  D+D++ K
Sbjct: 379 EDDVIVGDEYPKTLDNMMEKRVLFKINIKEANINQFDHVYTVMKICDDEDIIDK 432



 Score = 28.5 bits (62), Expect(3) = 3e-06
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 762 KYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVEV 637
           ++ + + V D + S  LL WD+E   + GK   ++ +  V V
Sbjct: 343 RFKVEVMVFDGTGSIRLLLWDKETSMLCGKRAEQIMEDDVIV 384


>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 40.0 bits (92), Expect(2) = 3e-06
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = -1

Query: 762 KYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVE 640
           +Y + ++  D   +A  + WD+EC +++G S  +LRQK +E
Sbjct: 344 RYRVKVRAVDLDGNAPFILWDKECTELLGISATDLRQKILE 384



 Score = 40.0 bits (92), Expect(2) = 3e-06
 Identities = 18/54 (33%), Positives = 33/54 (61%)
 Frame = -2

Query: 524 VELPADLKALIGNMMLFNVQIKEEQLRNYAGAFSVVKLTADQDLVWKYSATSLE 363
           + +P ++++L+G  MLF + +++EQ  N   AF+V+K+  D  LV  Y    L+
Sbjct: 387 LRIPREIESLVGLAMLFRIAVRKEQFDNLHNAFAVMKVMNDPKLVSVYCPELLD 440


>ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like,
           partial [Nicotiana sylvestris]
          Length = 244

 Score = 40.4 bits (93), Expect(2) = 6e-06
 Identities = 19/45 (42%), Positives = 26/45 (57%)
 Frame = -1

Query: 774 SFMNKYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVE 640
           S  ++Y   +QV D +   SLL WDRE   +IGKS  EL +  +E
Sbjct: 66  SVTHRYKFRVQVMDHTGFISLLLWDREATSLIGKSANELNEISIE 110



 Score = 38.9 bits (89), Expect(2) = 6e-06
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 1031 CIVFLTFKSGSFWVCARIIGIS-DE*W-YISCTRCTKKFHPALDQLYCIKCDHL 876
            C    +F+ G  W+ A ++ +  ++ W Y+ C +C+KK      + +C KCD L
Sbjct: 10   CYNLTSFQEGHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGSKFHCKKCDRL 63


>ref|XP_009759827.1| PREDICTED: uncharacterized protein LOC104212304 [Nicotiana
           sylvestris]
          Length = 639

 Score = 42.7 bits (99), Expect(2) = 9e-06
 Identities = 19/41 (46%), Positives = 28/41 (68%)
 Frame = -1

Query: 762 KYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVE 640
           +Y + ++V D + S SLL WDRE   +IGKS  EL++ F+E
Sbjct: 346 RYKLQVRVMDTTGSVSLLLWDRETMFLIGKSAKELKEGFLE 386



 Score = 35.8 bits (81), Expect(2) = 9e-06
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -2

Query: 539 GSSPSVELPADLKALIGNMMLFNVQIKEEQLRNYAGAFSVVKLTADQDLVWKYS 378
           G+      P +L  ++    +F V IK E +      +SVVKLT ++ L+ KYS
Sbjct: 389 GAVDKYPYPVELNNILQRKFMFKVIIKTENIHQQKEVYSVVKLTDEEQLMNKYS 442


>ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214830 [Nicotiana
            sylvestris]
          Length = 213

 Score = 43.1 bits (100), Expect(2) = 1e-05
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = -2

Query: 1004 GSFWVCARIIGIS-DE*W-YISCTRCTKKFHPALDQLYCIKCDHLQ 873
            G++WV A II +  D  W Y++C  C+KK   A ++ YC KC+ +Q
Sbjct: 86   GNYWVVATIIHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQIQ 131



 Score = 35.4 bits (80), Expect(2) = 1e-05
 Identities = 15/46 (32%), Positives = 29/46 (63%)
 Frame = -1

Query: 777 KSFMNKYMIHLQVADESASASLLCWDRECEQMIGKSCVELRQKFVE 640
           +S  ++Y + ++V D + + SLL WD++  ++IGKS  +L+    E
Sbjct: 131 QSVTHRYRLQVKVMDCTGTISLLLWDKDATKIIGKSANDLKDVVFE 176


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