BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00034992
         (402 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AJE29370.1| putative gag protein [Coffea canephora]                 36   4e-08

>gb|AJE29370.1| putative gag protein [Coffea canephora]
          Length = 433

 Score = 36.2 bits (82), Expect(3) = 4e-08
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +2

Query: 293 RGNGIVCYRYHEEGHIKRNCPRRKK 367
           R  GI C+  HE GHIKR CP +KK
Sbjct: 226 RKGGIQCFGCHEFGHIKRYCPHQKK 250



 Score = 35.8 bits (81), Expect(3) = 4e-08
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +1

Query: 82  TDSYDSLVMTLLYGKDTLDLE 144
           +DSY+S+V TLLYGKDTL+ E
Sbjct: 156 SDSYESVVTTLLYGKDTLEFE 176



 Score = 31.6 bits (70), Expect(3) = 4e-08
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 189 NQEEGHESALVARGMNRNGRKSGGGSVTSRSDSR 290
           NQ+   E+AL+ARG N+ G++ GG S    S ++
Sbjct: 192 NQDVTQEAALIARGENKRGKQFGGESKAGGSKAK 225