BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00034894
         (508 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012841352.1| PREDICTED: pentatricopeptide repeat-containi...   231   4e-71
ref|XP_011098631.1| PREDICTED: pentatricopeptide repeat-containi...   205   3e-61
gb|EYU34067.1| hypothetical protein MIMGU_mgv1a025359mg [Erythra...   134   3e-39
ref|XP_006431157.1| hypothetical protein CICLE_v10011507mg [Citr...   131   6e-33
ref|XP_008379357.1| PREDICTED: pentatricopeptide repeat-containi...   125   1e-30
ref|XP_009360623.1| PREDICTED: pentatricopeptide repeat-containi...   124   3e-30
ref|XP_015582500.1| PREDICTED: pentatricopeptide repeat-containi...   124   3e-30
ref|XP_009781388.1| PREDICTED: pentatricopeptide repeat-containi...   123   3e-30
ref|XP_008353424.1| PREDICTED: pentatricopeptide repeat-containi...   123   4e-30
ref|XP_007217715.1| hypothetical protein PRUPE_ppa004522mg [Prun...   123   5e-30
ref|XP_015879446.1| PREDICTED: pentatricopeptide repeat-containi...   122   1e-29
ref|XP_012084708.1| PREDICTED: ATP-dependent zinc metalloproteas...   121   5e-29
ref|XP_010553996.1| PREDICTED: pentatricopeptide repeat-containi...   120   5e-29
ref|XP_007032546.1| Pentatricopeptide repeat (PPR) superfamily p...   120   5e-29
ref|XP_006356338.1| PREDICTED: pentatricopeptide repeat-containi...   119   6e-29
ref|XP_010032496.1| PREDICTED: pentatricopeptide repeat-containi...   120   7e-29
ref|XP_009602523.1| PREDICTED: pentatricopeptide repeat-containi...   117   3e-28
ref|XP_012459627.1| PREDICTED: ATP-dependent zinc metalloproteas...   118   8e-28
ref|XP_010257503.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-27
ref|XP_006482602.1| PREDICTED: ATP-dependent zinc metalloproteas...   117   2e-27

>ref|XP_012841352.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Erythranthe guttata]
          Length = 524

 Score =  231 bits (590), Expect = 4e-71
 Identities = 116/160 (72%), Positives = 133/160 (83%), Gaps = 7/160 (4%)
 Frame = +3

Query: 48  VSEIHRPKPFNCDSNFI------SALLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQ 209
           ++EIHR K FNC+SN +      S+LLNSCSSLK LLQIHAQIIISGLHR+SYI DKIIQ
Sbjct: 10  LAEIHRRKSFNCNSNLVPLRQCLSSLLNSCSSLKQLLQIHAQIIISGLHRNSYITDKIIQ 69

Query: 210 FCTSGSVSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCD-SRRDAIWVFLQM 386
            CTSGS+ TKHP+  ++H Y VV FS KLEPF+WNNVI+AYAT N D SRR+A+ VF+ M
Sbjct: 70  VCTSGSLRTKHPIHSLSHGYNVVCFSGKLEPFSWNNVIKAYATCNADCSRREAVRVFVDM 129

Query: 387 RRLGIRPNEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
           RRLGIRPNEHTFPFLFKACASF GL  G+QIHGDV+KHGL
Sbjct: 130 RRLGIRPNEHTFPFLFKACASFLGLGVGRQIHGDVLKHGL 169



 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
 Frame = +3

Query: 105 LLNSCSSLKHL---LQIHAQIIISGLHRDSYIIDKIIQF--CTSGSVSTKHPVDLINHAY 269
           L  +C+S   L    QIH  ++  GLH + Y+ + +I F  C    +      D + H  
Sbjct: 144 LFKACASFLGLGVGRQIHGDVLKHGLHFNVYVQNTLIHFYGCCKKILDAYKVFDEMTHRT 203

Query: 270 YVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRPNEHTFPFLFKACAS 449
            V          +WN+VI A  +  C    D+I +F++MR  G  P+E T   +  +CA 
Sbjct: 204 VV----------SWNSVISA--SIECSWFYDSIELFIKMRDRGFEPDETTMVIVLSSCAE 251

Query: 450 FSGLIEGKQIHGDVVKHGL 506
              L  GK +H  V+  G+
Sbjct: 252 LGNLSLGKWVHSQVIAKGM 270


>ref|XP_011098631.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Sesamum indicum]
          Length = 491

 Score =  205 bits (522), Expect = 3e-61
 Identities = 106/165 (64%), Positives = 125/165 (75%), Gaps = 8/165 (4%)
 Frame = +3

Query: 33  MARF---LVSEIHRPKPFNCDSNFIS-----ALLNSCSSLKHLLQIHAQIIISGLHRDSY 188
           M RF   ++SEIH PKP   +SN  +     +LL+S SS   LLQIHAQ+I+SG HR+SY
Sbjct: 1   MVRFQLPVLSEIHPPKPLFYNSNSETLRRCVSLLSSVSSPNQLLQIHAQLIVSGHHRNSY 60

Query: 189 IIDKIIQFCTSGSVSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAI 368
           I DKI+QFCTS S+  KH +DLINH  Y V  S  LE F+WNNVIRAYATS+ DS+R+A+
Sbjct: 61  ITDKIVQFCTSDSLRKKHSIDLINHGRYAVKLSGNLETFSWNNVIRAYATSHFDSQREAL 120

Query: 369 WVFLQMRRLGIRPNEHTFPFLFKACASFSGLIEGKQIHGDVVKHG 503
            VFL MRRLG+ PNEHTFPFLFKACAS  GL EG+QIHGDVVKHG
Sbjct: 121 SVFLDMRRLGVGPNEHTFPFLFKACASLLGLNEGRQIHGDVVKHG 165


>gb|EYU34067.1| hypothetical protein MIMGU_mgv1a025359mg [Erythranthe guttata]
          Length = 482

 Score =  134 bits (337), Expect(2) = 3e-39
 Identities = 66/90 (73%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = +3

Query: 240 HPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCD-SRRDAIWVFLQMRRLGIRPNEH 416
           HP     H Y VV FS KLEPF+WNNVI+AYAT N D SRR+A+ VF+ MRRLGIRPNEH
Sbjct: 38  HPGLYFRHGYNVVCFSGKLEPFSWNNVIKAYATCNADCSRREAVRVFVDMRRLGIRPNEH 97

Query: 417 TFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
           TFPFLFKACASF GL  G+QIHGDV+KHGL
Sbjct: 98  TFPFLFKACASFLGLGVGRQIHGDVLKHGL 127



 Score = 54.7 bits (130), Expect(2) = 3e-39
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +2

Query: 104 SLELLLFPKTSFTDSCPDHNIRSPSRFLHYRQNHPVLYLR 223
           SL+ LLF KT+ +D   DHNIR+ S+FL+YRQNHP LY R
Sbjct: 5   SLKFLLFAKTASSDPRTDHNIRASSQFLYYRQNHPGLYFR 44



 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
 Frame = +3

Query: 105 LLNSCSSLKHL---LQIHAQIIISGLHRDSYIIDKIIQF--CTSGSVSTKHPVDLINHAY 269
           L  +C+S   L    QIH  ++  GLH + Y+ + +I F  C    +      D + H  
Sbjct: 102 LFKACASFLGLGVGRQIHGDVLKHGLHFNVYVQNTLIHFYGCCKKILDAYKVFDEMTHRT 161

Query: 270 YVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRPNEHTFPFLFKACAS 449
            V          +WN+VI A  +  C    D+I +F++MR  G  P+E T   +  +CA 
Sbjct: 162 VV----------SWNSVISA--SIECSWFYDSIELFIKMRDRGFEPDETTMVIVLSSCAE 209

Query: 450 FSGLIEGKQIHGDVVKHGL 506
              L  GK +H  V+  G+
Sbjct: 210 LGNLSLGKWVHSQVIAKGM 228


>ref|XP_006431157.1| hypothetical protein CICLE_v10011507mg [Citrus clementina]
           gi|557533214|gb|ESR44397.1| hypothetical protein
           CICLE_v10011507mg [Citrus clementina]
           gi|641853762|gb|KDO72580.1| hypothetical protein
           CISIN_1g046312mg [Citrus sinensis]
          Length = 514

 Score =  131 bits (329), Expect = 6e-33
 Identities = 73/167 (43%), Positives = 98/167 (58%), Gaps = 9/167 (5%)
 Frame = +3

Query: 33  MARFLV---SEIHRPKPFNCDSNFIS------ALLNSCSSLKHLLQIHAQIIISGLHRDS 185
           M RF V   + I  PKP NC+S+ +S      + L  C S KHL QIHAQI +SGL  D+
Sbjct: 1   MVRFPVPTTNHIFPPKPSNCNSDLLSKARQCLSFLKLCCSKKHLYQIHAQIQVSGLQNDA 60

Query: 186 YIIDKIIQFCTSGSVSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDA 365
            I+ ++++FCT  S       +L      + N+     P  WNN+IR YA S  D  R+A
Sbjct: 61  QILKELVRFCTLSSSK-----NLTYARSILCNYVNDSVPIPWNNLIRGYAWS--DRPREA 113

Query: 366 IWVFLQMRRLGIRPNEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
           +WVF+ M+R GI+P E T+PF+ KACA  SGL EG Q+  +V K GL
Sbjct: 114 VWVFIDMKRRGIKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 160


>ref|XP_008379357.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Malus domestica]
          Length = 505

 Score =  125 bits (313), Expect = 1e-30
 Identities = 70/153 (45%), Positives = 94/153 (61%), Gaps = 6/153 (3%)
 Frame = +3

Query: 66  PKPFNCDSNFISA------LLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQFCTSGS 227
           P   NC+SNF S       LL+ CS+ KHL QIHAQI +SG   D +++ ++I+FC S  
Sbjct: 7   PTANNCNSNFGSKKEQCLHLLSRCSTFKHLSQIHAQIQVSGFQNDHFLLTQLIRFCASS- 65

Query: 228 VSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRP 407
                P     +A  +++ SE   P +WN +IR  A+S  DS R+AIWVF  M   G+RP
Sbjct: 66  -----PAKNFAYARNLLDHSESSPPSSWNFLIRGCASS--DSXREAIWVFRAMLARGVRP 118

Query: 408 NEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
           N+ TFPFL K+CAS + L EG+Q+H  VVK GL
Sbjct: 119 NQLTFPFLIKSCASAAALKEGRQVHVGVVKCGL 151


>ref|XP_009360623.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Pyrus x bretschneideri]
          Length = 505

 Score =  124 bits (310), Expect = 3e-30
 Identities = 69/153 (45%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
 Frame = +3

Query: 66  PKPFNCDSNFISA------LLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQFCTSGS 227
           P   NC+SNF S       LL+ CS+ K L QIHAQI +SG  +D +++ ++++FC    
Sbjct: 7   PTASNCNSNFGSKKQQCLHLLSLCSTFKRLSQIHAQIQVSGFQKDHFLLTQLVRFCALS- 65

Query: 228 VSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRP 407
                P     +A  +++ SE   P +WN  IR YA+S  DS R+AIWVF  + R G+RP
Sbjct: 66  -----PAKNFAYARTLLSHSESSPPSSWNFFIRGYASS--DSPREAIWVFRAILRSGVRP 118

Query: 408 NEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
           N+ TFPFL K CAS + L EGKQ+H  VVK GL
Sbjct: 119 NQLTFPFLIKCCASAAALKEGKQVHVGVVKCGL 151


>ref|XP_015582500.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Ricinus communis]
          Length = 515

 Score =  124 bits (310), Expect = 3e-30
 Identities = 70/167 (41%), Positives = 105/167 (62%), Gaps = 9/167 (5%)
 Frame = +3

Query: 33  MARFLV---SEIHRPKPFNCDSNFIS------ALLNSCSSLKHLLQIHAQIIISGLHRDS 185
           M RF +   + I  P+P + +SNF+S      +LL  CSS+KHL QIH+QI +SGL  D+
Sbjct: 1   MVRFPIPTATPIFPPEPISSNSNFLSIKHQCLSLLKLCSSIKHLYQIHSQIQVSGLQGDT 60

Query: 186 YIIDKIIQFCTSGSVSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDA 365
           +++ ++I+F      S+  P   +++A  +++ S    P  WN +IR YA SN  + +DA
Sbjct: 61  FLVTQLIKF------SSLSPSKDLSYAQSILDHSVHPVPLPWNILIRGYADSN--TPKDA 112

Query: 366 IWVFLQMRRLGIRPNEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
           ++V+  MR  GIRPN  TFPFL KACA+     EGKQ+H +V+K+GL
Sbjct: 113 LFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEGKQVHVEVIKYGL 159


>ref|XP_009781388.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Nicotiana sylvestris]
          Length = 460

 Score =  123 bits (308), Expect = 3e-30
 Identities = 69/143 (48%), Positives = 88/143 (61%)
 Frame = +3

Query: 75  FNCDSNFISALLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQFCTSGSVSTKHPVDL 254
           F   +  + ALLNSCSSLKHL QIH  IIISGL + + II KI+ F  S +     P++ 
Sbjct: 3   FTSKTQQLLALLNSCSSLKHLFQIHTHIIISGLCQQTSIILKIVNFFASHT-----PINS 57

Query: 255 INHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRPNEHTFPFLF 434
             +   V+  S       WN +IR YAT N  S  +AI VF++MRR G   +E T+PFLF
Sbjct: 58  ATYVGLVIKQSHNSSNVWWNILIRNYATCNNCSHSEAIRVFVEMRRCGAASDEFTYPFLF 117

Query: 435 KACASFSGLIEGKQIHGDVVKHG 503
           KAC+SF GL EGKQIH + +K G
Sbjct: 118 KACSSFLGLKEGKQIHAEAIKIG 140



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
 Frame = +3

Query: 105 LLNSCSS---LKHLLQIHAQIIISGLHRDSYIIDKIIQFCTSGSVSTKHPVDLINHAYYV 275
           L  +CSS   LK   QIHA+ I  G   + Y+ + ++ F  S     K  VD    AY V
Sbjct: 116 LFKACSSFLGLKEGKQIHAEAIKIGFCNNVYVQNTLVHFYGS----CKKIVD----AYKV 167

Query: 276 VNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRPNEHTFPFLFKACASFS 455
                     +WN+ I A+  S      +A+ +F +MR    +P+E T   L  ACA   
Sbjct: 168 FVVMSLRTVISWNSTISAFVESCWFY--EAVEIFREMRECQFQPDETTMVVLLSACAELG 225

Query: 456 GLIEGKQIHGDVVKHGL 506
            L  GK IH  V++ G+
Sbjct: 226 DLSLGKWIHCQVIEQGM 242


>ref|XP_008353424.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Malus domestica]
          Length = 505

 Score =  123 bits (309), Expect = 4e-30
 Identities = 70/153 (45%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
 Frame = +3

Query: 66  PKPFNCDSNFISA------LLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQFCTSGS 227
           P   NC+SNF S       LL+ CS+ KHL QIHAQI +SG  +D +++ ++++FC    
Sbjct: 7   PTANNCNSNFGSKKQQCLHLLSLCSTFKHLSQIHAQIQVSGFRKDHFLLTQLVRFCALS- 65

Query: 228 VSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRP 407
                P     +A  ++  SE   P +WN +IR YA S  DS R+AIWVF  M   G+RP
Sbjct: 66  -----PAKNFAYARTLLRHSESSPPSSWNFLIRGYAPS--DSPREAIWVFRVMLHSGVRP 118

Query: 408 NEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
           N  TFPFL K CAS + L EGKQ+H  VVK GL
Sbjct: 119 NLLTFPFLIKCCASAAALKEGKQVHVGVVKCGL 151


>ref|XP_007217715.1| hypothetical protein PRUPE_ppa004522mg [Prunus persica]
           gi|462413865|gb|EMJ18914.1| hypothetical protein
           PRUPE_ppa004522mg [Prunus persica]
          Length = 505

 Score =  123 bits (308), Expect = 5e-30
 Identities = 69/153 (45%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
 Frame = +3

Query: 66  PKPFNCDSNFISA------LLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQFCTSGS 227
           P   NC+SNF S       LLN C + K L Q+HAQI +SG  RD +++ ++I+FC    
Sbjct: 7   PTANNCNSNFGSKKQQCLYLLNLCFTFKQLSQVHAQIQVSGFQRDHFLLTQLIRFCALS- 65

Query: 228 VSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRP 407
                P    N+A  +++ SE   P +WN +IR YA+S  D+ R+AIW F  M   GIRP
Sbjct: 66  -----PSKNFNYARTLLDHSESSPPSSWNFLIRGYASS--DTPREAIWAFRAMLGRGIRP 118

Query: 408 NEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
           N+ TFPFL K+CAS + L EG+Q+H  VVK GL
Sbjct: 119 NQLTFPFLIKSCASAAALKEGRQVHVGVVKCGL 151


>ref|XP_015879446.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Ziziphus jujuba]
           gi|1009173143|ref|XP_015867656.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g36730-like [Ziziphus jujuba]
          Length = 515

 Score =  122 bits (305), Expect = 1e-29
 Identities = 67/160 (41%), Positives = 99/160 (61%), Gaps = 8/160 (5%)
 Frame = +3

Query: 51  SEIHRPKPFNC--DSNFIS------ALLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKII 206
           + +  PK ++    S+F+S      +L   CSS+K L QIHAQ+ +SGL  D++++ +++
Sbjct: 10  NRVFAPKTYHHPDSSDFVSKKQQCLSLFKICSSIKQLSQIHAQLHLSGLQGDTFLLTQLV 69

Query: 207 QFCTSGSVSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQM 386
           +FC         P   +NHA  +++ S+   P +WN +IR YA+S  DS  +AIWVF +M
Sbjct: 70  RFCALS------PSKDLNHARTILHRSDHSPPSSWNILIRGYASS--DSPTEAIWVFREM 121

Query: 387 RRLGIRPNEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
           R  GIRPN+ TFPFL KACA+   L  G+Q+H DV K GL
Sbjct: 122 RCRGIRPNKLTFPFLLKACATIMALKVGRQVHADVFKRGL 161


>ref|XP_012084708.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
            [Jatropha curcas]
          Length = 1159

 Score =  121 bits (304), Expect = 5e-29
 Identities = 66/135 (48%), Positives = 95/135 (70%), Gaps = 1/135 (0%)
 Frame = +3

Query: 105  LLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQFCT-SGSVSTKHPVDLINHAYYVVN 281
            LL  CSS+K L Q+HAQI +SGL  D+++I ++I+FC+ S S +  +   L++H+   +N
Sbjct: 675  LLKLCSSIKQLSQVHAQIQLSGLQHDTFLISELIRFCSLSQSRNLSYAQSLLDHS---IN 731

Query: 282  FSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRPNEHTFPFLFKACASFSGL 461
             S  L P +WN +IR YA  +C++ ++AIWVF +MRR  IRPN  T+PFL KACA+   +
Sbjct: 732  -SVPLPPPSWNILIRGYA--DCNTPKEAIWVFRRMRREEIRPNYLTYPFLLKACATCFAI 788

Query: 462  IEGKQIHGDVVKHGL 506
             EGKQ+H DVVK+GL
Sbjct: 789  KEGKQVHVDVVKNGL 803


>ref|XP_010553996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Tarenaya hassleriana]
          Length = 507

 Score =  120 bits (301), Expect = 5e-29
 Identities = 68/159 (42%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
 Frame = +3

Query: 33  MARFLVSEIHRPKPFNCDSNFISALL--NSCSSLKHLLQIHAQIIISGLHRDSYIIDKII 206
           M RF VS  +     N +S     LL    CSS+KHLLQIHAQI+ISGLH DS+++ +++
Sbjct: 1   MVRFSVSTANSNGYSNLNSRKDQLLLFLKLCSSIKHLLQIHAQILISGLHSDSFLLGELV 60

Query: 207 QFCTSGSVSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQM 386
           +  +  +         + +A  ++  S    PF WN +IR Y  S+ DS  +A+ V+ +M
Sbjct: 61  RVLSLSACKN------LRYARALLCHSADSTPFLWNTLIRGY--SSTDSPGEAVCVYNEM 112

Query: 387 RRLGIRPNEHTFPFLFKACASFSGLIEGKQIHGDVVKHG 503
           +R GIRP+  TFPFL KACAS  GL  G+Q+H +V+KHG
Sbjct: 113 KRRGIRPDNFTFPFLLKACASCFGLTAGRQVHVEVLKHG 151


>ref|XP_007032546.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508711575|gb|EOY03472.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 480

 Score =  120 bits (300), Expect = 5e-29
 Identities = 60/148 (40%), Positives = 95/148 (64%), Gaps = 6/148 (4%)
 Frame = +3

Query: 81  CDSNFIS------ALLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQFCTSGSVSTKH 242
           C+ NF+S        L  CSS+KHL Q+HAQI+IS LH+DS+++ ++++F      S+  
Sbjct: 2   CNQNFLSRKNQFLVFLKLCSSIKHLSQVHAQILISNLHQDSFLLTELVRF------SSLS 55

Query: 243 PVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRPNEHTF 422
           P   +++ + ++  S    P  WN +IR YA+S  D+ + AIWV  +MR+ G++ N+ T+
Sbjct: 56  PYKNLSYTHTLLVNSLNSTPSTWNILIRGYASS--DTPQKAIWVLKEMRKRGLQRNKLTY 113

Query: 423 PFLFKACASFSGLIEGKQIHGDVVKHGL 506
           PF+ KACA    L EG+Q+HG++ KHGL
Sbjct: 114 PFVLKACARGEALAEGRQVHGEIFKHGL 141


>ref|XP_006356338.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Solanum tuberosum]
          Length = 463

 Score =  119 bits (299), Expect = 6e-29
 Identities = 66/144 (45%), Positives = 91/144 (63%)
 Frame = +3

Query: 75  FNCDSNFISALLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQFCTSGSVSTKHPVDL 254
           F   +  + ALL+ CSSLKH+ QIH QIIISGL + + I+ KI+ F  S +     P++ 
Sbjct: 3   FTSKTQQLIALLSFCSSLKHVFQIHTQIIISGLSQQNCILLKIVNFFASHT-----PINS 57

Query: 255 INHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRPNEHTFPFLF 434
            ++A  ++  S+      WN +IR YAT    S  +AI  F++MRR G   +E T+PFLF
Sbjct: 58  SSYAGLLIKQSQNSSNSWWNILIRNYATGEYCSHSEAIRFFVEMRRSGAASDEFTYPFLF 117

Query: 435 KACASFSGLIEGKQIHGDVVKHGL 506
           KAC+SF GL EGKQIH DV+K G+
Sbjct: 118 KACSSFLGLKEGKQIHCDVIKMGI 141



 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
 Frame = +3

Query: 105 LLNSCSS---LKHLLQIHAQIIISGLHRDSYIIDKIIQFCTSGSVSTKHPVDLINHAYYV 275
           L  +CSS   LK   QIH  +I  G+  + Y+ + +I F  S     K  VD    AY V
Sbjct: 116 LFKACSSFLGLKEGKQIHCDVIKMGICNNVYVQNTLIHFYGS----CKKIVD----AYKV 167

Query: 276 VNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRPNEHTFPFLFKACASFS 455
            +         WN++I A    +C    DAI +F  MR+ G++P+E T   L  ACA   
Sbjct: 168 FDVMSLRTVVTWNSIISA-CVGSC-WYYDAIEIFRLMRKCGVQPDETTMVILLSACAELG 225

Query: 456 GLIEGKQIHGDVVKHGL 506
            LI GK IH  V++ G+
Sbjct: 226 DLILGKWIHCQVIEQGM 242


>ref|XP_010032496.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Eucalyptus grandis] gi|629085529|gb|KCW51886.1|
           hypothetical protein EUGRSUZ_J01347 [Eucalyptus grandis]
          Length = 514

 Score =  120 bits (300), Expect = 7e-29
 Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 6/158 (3%)
 Frame = +3

Query: 51  SEIHRPKPFNCDSNFIS------ALLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQF 212
           S I   K  + +SNF+S        L   SS+KH+ QIHAQI++SGL  D+++  +II+ 
Sbjct: 10  SAISPVKILSYNSNFVSIKHRLITFLKHSSSIKHITQIHAQILVSGLRGDAFLAREIIRL 69

Query: 213 CTSGSVSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRR 392
           C+  S STK     + +A  +V  +E   P +WN VIR  A+   DS RDA+ V+L+MRR
Sbjct: 70  CSLSS-STK----CLRYARSIVEHAEISAPSSWNIVIRGLASK--DSWRDALRVYLRMRR 122

Query: 393 LGIRPNEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
            G+ PN HTFPF+ K+CA+ + L +G+Q+HG+V K GL
Sbjct: 123 GGVSPNGHTFPFVLKSCAALAVLRQGRQVHGEVCKFGL 160


>ref|XP_009602523.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Nicotiana tomentosiformis]
          Length = 460

 Score =  117 bits (294), Expect = 3e-28
 Identities = 65/134 (48%), Positives = 85/134 (63%)
 Frame = +3

Query: 102 ALLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQFCTSGSVSTKHPVDLINHAYYVVN 281
           A+LNSCSS+KHL QIH  IIISGL + + II KI+ F  S +     P++   +A  V+ 
Sbjct: 12  AILNSCSSVKHLFQIHTHIIISGLCQQTSIILKIVNFFASHT-----PINSATYAGLVIK 66

Query: 282 FSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLGIRPNEHTFPFLFKACASFSGL 461
            S       WN +IR YAT    S  +AI VF++MRR G   +E T+PFLFKAC++F GL
Sbjct: 67  QSHNSSNVWWNILIRNYATCKNCSHSEAIRVFVEMRRCGAASDEFTYPFLFKACSTFLGL 126

Query: 462 IEGKQIHGDVVKHG 503
            EGKQIH + +K G
Sbjct: 127 KEGKQIHAESIKIG 140


>ref|XP_012459627.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
            chloroplastic-like [Gossypium raimondii]
          Length = 1153

 Score =  118 bits (295), Expect = 8e-28
 Identities = 60/156 (38%), Positives = 97/156 (62%)
 Frame = +3

Query: 39   RFLVSEIHRPKPFNCDSNFISALLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQFCT 218
            R ++SE         D       L  CSS+KH+ QI AQI+IS LH+DS+++ ++++F  
Sbjct: 650  RAILSEFVDESVIKVDRTPCLVFLTLCSSIKHVSQIQAQIVISNLHQDSFLLTELVRF-- 707

Query: 219  SGSVSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLG 398
                S+  P   +++A+ ++  S    P  WN +IR Y++SN  S ++AIWV  +MR+ G
Sbjct: 708  ----SSLSPFKNLSYAHSLLMNSLNSTPSTWNMLIRGYSSSN--SPQNAIWVLKEMRKRG 761

Query: 399  IRPNEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
            ++ N+ T+PF+ KAC+    L EG+Q+HG++VKHGL
Sbjct: 762  LKRNKLTYPFVLKACSEAEALEEGRQVHGEIVKHGL 797


>ref|XP_010257503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
           [Nelumbo nucifera]
          Length = 515

 Score =  117 bits (292), Expect = 1e-27
 Identities = 73/165 (44%), Positives = 96/165 (58%), Gaps = 8/165 (4%)
 Frame = +3

Query: 36  ARFLVSEIHRPKPFNCDSNFIS------ALLNSCSSLKHLLQIHAQIIISGLHRDSYIID 197
           AR  V   + PK  N + NF+S      +LL  CSS+K L QIHAQI   GL RD Y++ 
Sbjct: 5   ARPTVCLCYPPKNSNGNLNFVSRKEQFLSLLKDCSSIKVLNQIHAQIQTYGLGRDGYVMS 64

Query: 198 KIIQFCTSGSVS--TKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIW 371
            +++FC   S S   ++   ++ HA   +  S       WN VIR YA +  D  R+AI 
Sbjct: 65  HVLRFCALSSPSGDLEYARSVLYHALDRITSS-------WNIVIRGYALN--DLPREAIA 115

Query: 372 VFLQMRRLGIRPNEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
           VFL+MR  G++PN+ TFPFL KACA  S L EG+QI  D VKHG+
Sbjct: 116 VFLEMRSRGVKPNKLTFPFLLKACAHLSALQEGRQIQADAVKHGV 160


>ref|XP_006482602.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
            chloroplastic-like [Citrus sinensis]
          Length = 1197

 Score =  117 bits (292), Expect = 2e-27
 Identities = 64/156 (41%), Positives = 87/156 (55%)
 Frame = +3

Query: 39   RFLVSEIHRPKPFNCDSNFISALLNSCSSLKHLLQIHAQIIISGLHRDSYIIDKIIQFCT 218
            R ++SE         D     + L  C S KHL QIHAQI +SGL  D+ I+ ++++FCT
Sbjct: 695  RAVLSEFTDVSADQVDRTPCLSFLKLCCSKKHLYQIHAQIQVSGLQNDAQILKELVRFCT 754

Query: 219  SGSVSTKHPVDLINHAYYVVNFSEKLEPFAWNNVIRAYATSNCDSRRDAIWVFLQMRRLG 398
              S       +L      + N+     P  WNN+IR YA S  D  R+A+WV + M+R G
Sbjct: 755  LSSSK-----NLTYARSILCNYVNDSVPIPWNNLIRGYAWS--DRPREAVWVLIDMKRRG 807

Query: 399  IRPNEHTFPFLFKACASFSGLIEGKQIHGDVVKHGL 506
            I+P E T+PF+ KACA  SGL EG Q+  +V K GL
Sbjct: 808  IKPTEFTYPFVLKACAEISGLNEGMQVQANVTKSGL 843