BLASTX nr result
ID: Rehmannia28_contig00034643
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00034643
(310 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011072126.1| PREDICTED: uncharacterized protein LOC105157... 68 2e-15
ref|XP_009618253.1| PREDICTED: uncharacterized protein LOC104110... 65 8e-13
dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group] 60 1e-12
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 60 1e-12
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 58 2e-12
ref|XP_010451711.1| PREDICTED: uncharacterized protein LOC104733... 56 8e-12
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 56 1e-11
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 57 2e-11
emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group] 57 2e-11
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group] 56 2e-11
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 56 2e-11
gb|ABF98227.1| retrotransposon protein, putative, unclassified [... 56 2e-11
dbj|BAF16212.1| Os04g0682600, partial [Oryza sativa Japonica Group] 57 2e-11
gb|KYP61911.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 52 2e-11
ref|XP_014519802.1| PREDICTED: uncharacterized protein LOC106776... 50 4e-11
gb|AAO23078.1| polyprotein [Glycine max] 51 7e-11
ref|XP_009788728.1| PREDICTED: uncharacterized protein LOC104236... 49 9e-11
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 55 1e-10
ref|XP_006601642.1| PREDICTED: uncharacterized protein LOC100813... 55 2e-10
gb|KYP54676.1| Retrovirus-related Pol polyprotein from transposo... 51 2e-10
>ref|XP_011072126.1| PREDICTED: uncharacterized protein LOC105157414 [Sesamum indicum]
Length = 289
Score = 67.8 bits (164), Expect(2) = 2e-15
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Frame = -3
Query: 209 SQDLPSTNA----DGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFI 42
S+ PS N D + K+ P+E+L R+V R V Q+LI+WA S+ +++WED +
Sbjct: 201 SKYFPSVNLSELEDEVFKVYPIEILGRRLVPRNNVGVPQVLIQWAHSNPEQATWEDYYVV 260
Query: 41 IKKFPNFDPWGQG 3
KFP FDPWGQG
Sbjct: 261 AAKFPRFDPWGQG 273
Score = 41.2 bits (95), Expect(2) = 2e-15
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
LKLQ ++Q SV LR+ LKLS+KYFGP+
Sbjct: 139 LKLQLYKQTSVALRKQLKLSAKYFGPY 165
>ref|XP_009618253.1| PREDICTED: uncharacterized protein LOC104110457 [Nicotiana
tomentosiformis]
Length = 275
Score = 64.7 bits (156), Expect(2) = 8e-13
Identities = 27/69 (39%), Positives = 45/69 (65%)
Frame = -3
Query: 224 STLDPSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKF 45
S + PSQD P N +G + +P+ +L+ R+VK+G +E ++L++WA+ S ++ W+D F
Sbjct: 206 SGIFPSQDRPYCNDEGQILTEPIAILERRMVKKGNKETVEVLVQWANLSKEEAIWKDYAF 265
Query: 44 IIKKFPNFD 18
I FP FD
Sbjct: 266 ITSHFPEFD 274
Score = 35.4 bits (80), Expect(2) = 8e-13
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = -2
Query: 279 QPFRQNSVQLRRNLKLSSKYFGPF 208
+P+RQ SV +RRNLKL +KYFG +
Sbjct: 147 EPYRQISVVVRRNLKLVAKYFGSY 170
>dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group]
Length = 866
Score = 59.7 bits (143), Expect(2) = 1e-12
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = -3
Query: 212 PSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKK 33
P Q LP +A+G + PL VLD R++ R E V Q I WA+ + ++WED FI K
Sbjct: 801 PEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKV 860
Query: 32 FPNFDP 15
FP+F P
Sbjct: 861 FPSFTP 866
Score = 39.7 bits (91), Expect(2) = 1e-12
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
LK+QP+R NS+ L +LKL S+Y+GPF
Sbjct: 735 LKMQPYRHNSLGLHSSLKLHSRYYGPF 761
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 59.7 bits (143), Expect(2) = 1e-12
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = -3
Query: 212 PSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKK 33
P Q LP +A+G + PL VLD R++ R E V Q I WA+ + ++WED FI K
Sbjct: 580 PEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDAAFITKV 639
Query: 32 FPNFDP 15
FP+F P
Sbjct: 640 FPSFTP 645
Score = 39.7 bits (91), Expect(2) = 1e-12
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
LK+QP+R NS+ L +LKL S+Y+GPF
Sbjct: 514 LKMQPYRHNSLGLHSSLKLHSRYYGPF 540
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 58.2 bits (139), Expect(2) = 2e-12
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = -3
Query: 212 PSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKK 33
P +LP+ DG +K +P+ VL R++ R V Q LI W++ + +++WED +I K
Sbjct: 890 PMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKV 949
Query: 32 FPNFDP 15
FPNF P
Sbjct: 950 FPNFQP 955
Score = 40.8 bits (94), Expect(2) = 2e-12
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
LKLQP+RQN+ +R +LKL KY+GPF
Sbjct: 824 LKLQPYRQNAFGIRGSLKLRGKYYGPF 850
>ref|XP_010451711.1| PREDICTED: uncharacterized protein LOC104733878 [Camelina sativa]
Length = 1459
Score = 56.2 bits (134), Expect(2) = 8e-12
Identities = 26/69 (37%), Positives = 47/69 (68%)
Frame = -3
Query: 209 SQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKKF 30
S LPS +D L+K +P+ +LD ++VKR ++L++W++ + +++WE L + +KF
Sbjct: 1384 STQLPSIVSDVLIK-EPVLILDRKMVKRQGRAATKVLVQWSNETPEEATWEFLYDLQRKF 1442
Query: 29 PNFDPWGQG 3
P+F+P GQG
Sbjct: 1443 PSFEPCGQG 1451
Score = 40.4 bits (93), Expect(2) = 8e-12
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
+KLQP+RQ SV +R N KL+ KYFGP+
Sbjct: 1318 VKLQPYRQGSVVVRSNQKLAPKYFGPY 1344
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 56.2 bits (134), Expect(2) = 1e-11
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = -3
Query: 212 PSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKK 33
P +LP+ DG +K +P VL R++ R E V Q LI W + + +++WED +I
Sbjct: 1546 PMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWEDASYIQAA 1605
Query: 32 FPNFDP 15
FPNF P
Sbjct: 1606 FPNFQP 1611
Score = 39.7 bits (91), Expect(2) = 1e-11
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
LKLQP+RQ ++ +R +LKL SKY+GPF
Sbjct: 1480 LKLQPYRQVAMGIRGSLKLRSKYYGPF 1506
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 57.0 bits (136), Expect(2) = 2e-11
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = -3
Query: 212 PSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKK 33
P +LPS DG +K +P+ VL R++ RG V Q L+ W + S ++++WED I
Sbjct: 1521 PMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSM 1580
Query: 32 FPNFDP 15
FP+F+P
Sbjct: 1581 FPSFNP 1586
Score = 38.5 bits (88), Expect(2) = 2e-11
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
LKLQP+RQ + +R +LKL SK++GPF
Sbjct: 1455 LKLQPYRQTAFGIRGSLKLRSKFYGPF 1481
>emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]
Length = 1575
Score = 57.0 bits (136), Expect(2) = 2e-11
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = -3
Query: 233 SPQSTLDPSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWED 54
+P + PS LP N D P+++LD R ++RG + ++Q+LIRW+ S + +WE
Sbjct: 1456 APSEAVQPS--LPVLNPDAGHLAIPIKILDHRSIRRGSKMIKQVLIRWSGVSSSADTWES 1513
Query: 53 LKFIIKKFPNFDPWGQ 6
L + KFP WGQ
Sbjct: 1514 LDEMQAKFPAAPAWGQ 1529
Score = 38.5 bits (88), Expect(2) = 2e-11
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
+KLQP+ Q SV R N KLS KY+GPF
Sbjct: 1395 MKLQPYIQQSVMTRSNRKLSFKYYGPF 1421
>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 55.8 bits (133), Expect(2) = 2e-11
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = -3
Query: 212 PSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKK 33
P +LP + DG +K +P+ VL RVV R E V Q L+ W + S ++WED FI
Sbjct: 1308 PLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEPVTQWLVHWENLSPEDATWEDSAFIQAT 1367
Query: 32 FPNFDP 15
FP+F P
Sbjct: 1368 FPHFRP 1373
Score = 39.7 bits (91), Expect(2) = 2e-11
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
LK+QP+RQN+ LR +LKL +K++GPF
Sbjct: 1242 LKMQPYRQNAFGLRGSLKLRAKFYGPF 1268
>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 55.8 bits (133), Expect(2) = 2e-11
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = -3
Query: 212 PSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKK 33
P +LP ADG +K +PL VL RV+ R E V Q LI W + + ++WE+ FI
Sbjct: 1181 PLPNLPLVGADGTVKTEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWENATFIQAT 1240
Query: 32 FPNFDP 15
FP+F P
Sbjct: 1241 FPHFRP 1246
Score = 39.7 bits (91), Expect(2) = 2e-11
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
LK+QP+RQN+ LR +LKL +K++GPF
Sbjct: 1115 LKMQPYRQNAFGLRGSLKLRAKFYGPF 1141
>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1160
Score = 55.8 bits (133), Expect(2) = 2e-11
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = -3
Query: 212 PSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKK 33
P +LP ADG +K +PL VL RV+ R E V Q LI W + + ++WE+ FI
Sbjct: 1095 PLPNLPLVGADGTVKTEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWENATFIQAT 1154
Query: 32 FPNFDP 15
FP+F P
Sbjct: 1155 FPHFRP 1160
Score = 39.7 bits (91), Expect(2) = 2e-11
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
LK+QP+RQN+ LR +LKL +K++GPF
Sbjct: 1029 LKMQPYRQNAFGLRGSLKLRAKFYGPF 1055
>dbj|BAF16212.1| Os04g0682600, partial [Oryza sativa Japonica Group]
Length = 395
Score = 57.0 bits (136), Expect(2) = 2e-11
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = -3
Query: 233 SPQSTLDPSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWED 54
+P + PS LP N D P+++LD R ++RG + ++Q+LIRW+ S + +WE
Sbjct: 276 APSEAVQPS--LPVLNPDAGHLAIPIKILDHRSIRRGSKMIKQVLIRWSGVSSSADTWES 333
Query: 53 LKFIIKKFPNFDPWGQ 6
L + KFP WGQ
Sbjct: 334 LDEMQAKFPAAPAWGQ 349
Score = 38.5 bits (88), Expect(2) = 2e-11
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
+KLQP+ Q SV R N KLS KY+GPF
Sbjct: 215 MKLQPYIQQSVMTRSNRKLSFKYYGPF 241
>gb|KYP61911.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 963
Score = 52.4 bits (124), Expect(2) = 2e-11
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = -3
Query: 212 PSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKK 33
P LP A+ I P +VL SR++ RG +++ Q+L++W K++WEDL +
Sbjct: 836 PYVPLPLLTAEFGPIIQPSKVLQSRIILRGHDQIPQVLVQWEGMDTTKATWEDLSLVQDF 895
Query: 32 FPNFD 18
+PNF+
Sbjct: 896 YPNFN 900
Score = 42.7 bits (99), Expect(2) = 2e-11
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
+KLQP+RQ+SV LR+N KL +YFGPF
Sbjct: 770 VKLQPYRQHSVALRKNQKLGLRYFGPF 796
>ref|XP_014519802.1| PREDICTED: uncharacterized protein LOC106776848 [Vigna radiata var.
radiata]
Length = 1256
Score = 49.7 bits (117), Expect(2) = 4e-11
Identities = 21/65 (32%), Positives = 40/65 (61%)
Frame = -3
Query: 212 PSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKK 33
P LP T + I P+++L +RV+ RG++++ Q+LI+W ++++WED I
Sbjct: 1149 PYVPLPLTINEQFPIIQPMDILHTRVILRGQQQIPQLLIQWEGMDESEATWEDKDAFIAA 1208
Query: 32 FPNFD 18
+P+F+
Sbjct: 1209 YPSFN 1213
Score = 44.7 bits (104), Expect(2) = 4e-11
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPFS 205
+KLQP+RQ++V LR+N KLS +YFGPFS
Sbjct: 1083 VKLQPYRQHTVALRKNQKLSLRYFGPFS 1110
>gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 50.8 bits (120), Expect(2) = 7e-11
Identities = 21/66 (31%), Positives = 42/66 (63%)
Frame = -3
Query: 215 DPSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIK 36
DP LP T + + P+++L SR++ RG +++QIL++W + ++++WED++ I
Sbjct: 1425 DPYLPLPLTVTEMGPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKA 1484
Query: 35 KFPNFD 18
+P F+
Sbjct: 1485 SYPTFN 1490
Score = 42.7 bits (99), Expect(2) = 7e-11
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
+KLQP+RQ+S LR+N KLS +YFGPF
Sbjct: 1360 VKLQPYRQHSAVLRKNQKLSMRYFGPF 1386
>ref|XP_009788728.1| PREDICTED: uncharacterized protein LOC104236501 [Nicotiana
sylvestris]
Length = 165
Score = 48.9 bits (115), Expect(2) = 9e-11
Identities = 19/66 (28%), Positives = 40/66 (60%)
Frame = -3
Query: 218 LDPSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFII 39
+ P P+ + DG ++I P+ +L ++VK ++L++WA+ + N+++WED ++
Sbjct: 94 ITPQMQPPTCDVDGRVRIQPIAILQRKMVKVNNGVGVKVLVQWANLNPNEATWEDWGYMR 153
Query: 38 KKFPNF 21
+FP F
Sbjct: 154 SQFPEF 159
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 17/27 (62%), Positives = 26/27 (96%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
LKLQP+RQ+SV +R+NLKLS++++GP+
Sbjct: 30 LKLQPYRQSSVAIRKNLKLSARFYGPY 56
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 55.1 bits (131), Expect(2) = 1e-10
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = -3
Query: 212 PSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFIIKK 33
P +LPS DG +K +PL VL R+V R V Q LI W + S +++WED I
Sbjct: 1410 PMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQAM 1469
Query: 32 FPNFDP 15
FP+F+P
Sbjct: 1470 FPSFNP 1475
Score = 37.4 bits (85), Expect(2) = 1e-10
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
LKL+P+RQ++ +R +LKL SK++GPF
Sbjct: 1344 LKLKPYRQSAFGIRGSLKLRSKFYGPF 1370
>ref|XP_006601642.1| PREDICTED: uncharacterized protein LOC100813187 [Glycine max]
Length = 227
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = -3
Query: 224 STLDPSQDLPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKF 45
S+ P LP T +D L ++P VLDSRVV R +VQQ+LI+W +S K+ WED+ +
Sbjct: 84 SSKQPYLPLPLTLSDNGLVVEPKAVLDSRVVLRDSSQVQQVLIQWELASPKKAMWEDITW 143
Query: 44 IIKKFPNFD 18
+ + F+
Sbjct: 144 VKATYLQFN 152
Score = 37.0 bits (84), Expect(2) = 2e-10
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
+KLQP+ Q+S+ LR++ KL K+FGPF
Sbjct: 22 VKLQPYMQHSMALRKSQKLGMKHFGPF 48
>gb|KYP54676.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
cajan]
Length = 847
Score = 51.2 bits (121), Expect(2) = 2e-10
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = -3
Query: 212 PSQD---LPSTNADGLLKIDPLEVLDSRVVKRGKEEVQQILIRWADSSWNKSSWEDLKFI 42
PSQ LP T + + P VLDSR++ R + + Q+LI+W + ++WED+K I
Sbjct: 718 PSQQYLPLPLTTTEFGPSVQPFLVLDSRIIMRNSKSIPQVLIQWDSLGSSAATWEDVKEI 777
Query: 41 IKKFPNFD 18
+ FP F+
Sbjct: 778 RESFPQFN 785
Score = 40.8 bits (94), Expect(2) = 2e-10
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -2
Query: 288 LKLQPFRQNSVQLRRNLKLSSKYFGPF 208
+KLQP+RQ+SV LR+ KLS +YFGPF
Sbjct: 655 VKLQPYRQHSVVLRKVQKLSMRYFGPF 681