BLASTX nr result

ID: Rehmannia28_contig00034319 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00034319
         (2421 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78850.1| hypothetical protein (mitochondrion) [Vicia faba]       94   1e-19
gb|EEF25756.1| conserved hypothetical protein [Ricinus communis]...    69   4e-11
gb|AIE42561.1| hypothetical protein RadishMT_p030 (mitochondrion...    64   5e-09
ref|YP_004927580.1| orf106a (mitochondrion) [Brassica carinata] ...    64   6e-09
ref|YP_004927474.1| orf106a (mitochondrion) [Brassica oleracea] ...    64   6e-09
gb|AGC81682.1| hypothetical protein DCGMS_00220 (mitochondrion) ...    64   7e-09
ref|YP_717108.1| hypothetical protein BrnapMp009 [Brassica napus...    62   3e-08

>gb|AGC78850.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 91

 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 44/45 (97%), Positives = 44/45 (97%)
 Frame = +3

Query: 6   ILGAEVYEEWLFGPFRPVVRTSSFHVEDTGSIPVRDRYSFPAAFS 140
           ILGAEVYEEWLFGPFRPVVRTSSFHVEDTGSIPVRD YSFPAAFS
Sbjct: 47  ILGAEVYEEWLFGPFRPVVRTSSFHVEDTGSIPVRDGYSFPAAFS 91


>gb|EEF25756.1| conserved hypothetical protein [Ricinus communis]
           gi|223522900|gb|EEF26887.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 59

 Score = 68.6 bits (166), Expect = 4e-11
 Identities = 37/54 (68%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = -2

Query: 329 KERMHGDSVCR-RFEMKGHRWLRKNSRKSITERNGDLVLLAGREEASGPPFPAR 171
           ++R H  S+   +  MK H  LRKNSRKSITER+GDLVLLAGREEASGPPF AR
Sbjct: 6   RKRTHAWSLSEMKKSMKRHLRLRKNSRKSITERSGDLVLLAGREEASGPPFSAR 59


>gb|AIE42561.1| hypothetical protein RadishMT_p030 (mitochondrion) [Raphanus
           sativus]
          Length = 94

 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +2

Query: 38  FWSLSSSG*DIVFSCRRHGFDSRKG*VLIPGRFQLVFI 151
           F SLSSSG DIVFSCRRHGFDSR+G +LI GRFQLVFI
Sbjct: 5   FLSLSSSGSDIVFSCRRHGFDSRRGYLLILGRFQLVFI 42


>ref|YP_004927580.1| orf106a (mitochondrion) [Brassica carinata]
           gi|992329725|ref|YP_009228124.1| hypothetical protein
           BniMp054 (mitochondrion) [Brassica nigra]
           gi|335355041|gb|AEH43595.1| orf106a [Brassica carinata]
           gi|747023372|gb|AJD85476.1| hypothetical protein
           BniMp054 (mitochondrion) [Brassica nigra]
          Length = 106

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +2

Query: 38  FWSLSSSG*DIVFSCRRHGFDSRKG*VLIPGRFQLVFI 151
           F SLSSSG DIVFSCRRHGFDSR+G +LI GRFQLVFI
Sbjct: 8   FLSLSSSGSDIVFSCRRHGFDSRRGYLLILGRFQLVFI 45


>ref|YP_004927474.1| orf106a (mitochondrion) [Brassica oleracea]
           gi|335354947|gb|AEH43502.1| orf106a [Brassica oleracea]
          Length = 106

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +2

Query: 38  FWSLSSSG*DIVFSCRRHGFDSRKG*VLIPGRFQLVFI 151
           F SLSSSG DIVFSCRRHGFDSR+G +LI GRFQLVFI
Sbjct: 8   FLSLSSSGSDIVFSCRRHGFDSRRGYLLILGRFQLVFI 45


>gb|AGC81682.1| hypothetical protein DCGMS_00220 (mitochondrion) [Raphanus sativus]
          Length = 108

 Score = 63.9 bits (154), Expect = 7e-09
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +2

Query: 38  FWSLSSSG*DIVFSCRRHGFDSRKG*VLIPGRFQLVFI 151
           F SLSSSG DIVFSCRRHGFDSR+G +LI GRFQLVFI
Sbjct: 5   FLSLSSSGSDIVFSCRRHGFDSRRGYLLILGRFQLVFI 42


>ref|YP_717108.1| hypothetical protein BrnapMp009 [Brassica napus]
           gi|37591054|dbj|BAC98856.1| hypothetical protein
           [Brassica napus]
          Length = 106

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = +2

Query: 38  FWSLSSSG*DIVFSCRRHGFDSRKG*VLIPGRFQLVFI 151
           F SLSSSG DIVFSCRRHGFD R+G +LI GRFQLVFI
Sbjct: 8   FLSLSSSGSDIVFSCRRHGFDPRRGYLLILGRFQLVFI 45


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