BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00031954
         (1922 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III s...   740   0.0  
ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III s...   593   0.0  
gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Erythra...   548   0.0  
emb|CDP02819.1| unnamed protein product [Coffea canephora]            544   0.0  
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       536   0.0  
ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III s...   463   e-152
ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III s...   457   e-149
ref|XP_009794022.1| PREDICTED: DNA-directed RNA polymerase III s...   456   e-149
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   454   e-148
ref|XP_009621596.1| PREDICTED: DNA-directed RNA polymerase III s...   451   e-148
ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III s...   449   e-146
ref|XP_009621595.1| PREDICTED: DNA-directed RNA polymerase III s...   449   e-146
ref|XP_009608223.1| PREDICTED: DNA-directed RNA polymerase III s...   446   e-145
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ...   444   e-144
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p...   444   e-144
ref|XP_015578439.1| PREDICTED: DNA-directed RNA polymerase III s...   436   e-141
ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III s...   430   e-141
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr...   428   e-139
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]          429   e-139
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   428   e-138

>ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Sesamum
            indicum]
          Length = 683

 Score =  740 bits (1910), Expect = 0.0
 Identities = 378/556 (67%), Positives = 432/556 (77%), Gaps = 15/556 (2%)
 Frame = -1

Query: 1715 MADMDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEE 1536
            MADMDLDELLDGPS+ PNRP+RFAPKGSKFKPRPK EPSQ  PP+ASD++E LP+PKKEE
Sbjct: 1    MADMDLDELLDGPSQVPNRPSRFAPKGSKFKPRPKTEPSQLPPPAASDTVEGLPVPKKEE 60

Query: 1535 LGIKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXEIDVYFTP 1356
             GIK DIKPE+ ND  +M               LM                  IDVYFTP
Sbjct: 61   PGIKPDIKPEFANDGNDMDVEVKPEVKEEEGDDLMETEAEAEPDDAIVRE---IDVYFTP 117

Query: 1355 FVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPR 1176
             +D  TRLYVLQYPLRPLWRPYELD+ C+EVRVKP SAE+E+DLAVDVDSKNYDSGADPR
Sbjct: 118  SIDSNTRLYVLQYPLRPLWRPYELDDRCDEVRVKPASAELEVDLAVDVDSKNYDSGADPR 177

Query: 1175 VQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGS 996
            VQMKKQILT+ WKPPH SG+AVG+LTGNKL+LNP+H VVQLRPS+QHL++++SKRKT+  
Sbjct: 178  VQMKKQILTSSWKPPHASGYAVGILTGNKLHLNPVHAVVQLRPSMQHLDAKDSKRKTI-- 235

Query: 995  SNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKA 816
             NV D VK EEPQE           K+PEQ  DS E W+PLKYHS  SD+ A YL+KM +
Sbjct: 236  -NVEDRVKLEEPQEGKPSGSSKKLSKVPEQNNDSGEGWIPLKYHSAKSDVAAGYLRKMMS 294

Query: 815  QEGSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRTWLLEGPPVHRF 636
            + GSQI FSMSS D+LNSLCPG  S SFSSKGPP R LLTLPL+ERFRTWLLEGP VHRF
Sbjct: 295  RGGSQIYFSMSSCDYLNSLCPGTSSDSFSSKGPPRRVLLTLPLKERFRTWLLEGPRVHRF 354

Query: 635  EALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLLLFSKNA 456
            +ALK+LAPDESVEE+LGV+Q+HAR+VQGLWVPKS LVYGTDQG+ VLARDYVLLLFSKN 
Sbjct: 355  DALKYLAPDESVEEILGVIQEHARLVQGLWVPKSSLVYGTDQGVEVLARDYVLLLFSKNI 414

Query: 455  IIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSVVKKQEEEWE 276
            II+ SQLP RP L+ AM +VLNVLAVER AF DWKL+ELPD+SF+K NPS+V+KQEEEWE
Sbjct: 415  IINNSQLPQRPQLSKAMKEVLNVLAVERPAFSDWKLKELPDISFIKRNPSIVQKQEEEWE 474

Query: 275  CLEKRINDHVCGGRNRPGMRS---SNTTNNPAT*KSS------------SKLAMAEEVRE 141
            CLEK+IND + GGRN PG+++   SNTTNNPA  KSS            SK AM EEVRE
Sbjct: 475  CLEKKINDLLFGGRNGPGVKTSSKSNTTNNPAAPKSSNRVATRAPNGAPSKTAMPEEVRE 534

Query: 140  AITKALQKFLKVSRFC 93
            A+TKALQK  K  + C
Sbjct: 535  AVTKALQKLFKSIKVC 550


>ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Erythranthe
            guttata]
          Length = 676

 Score =  593 bits (1529), Expect = 0.0
 Identities = 329/562 (58%), Positives = 380/562 (67%), Gaps = 21/562 (3%)
 Frame = -1

Query: 1715 MADMDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEE 1536
            MADMDLD+LLD   + P R  RFAPKG K  P+PK EPSQ LPPSASD M++LP+PKKEE
Sbjct: 1    MADMDLDDLLDAKPRAPTRVVRFAPKGGKLNPKPKIEPSQPLPPSASDPMDTLPLPKKEE 60

Query: 1535 LG--IKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXE----I 1374
                I+ DIKPE+ N A+EM                                  E    I
Sbjct: 61   PKPEIEPDIKPEHANGAMEMDVEVKPDVKVKEDLMETEVAESVLDPVVKESTVDEVVREI 120

Query: 1373 DVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYD 1194
            DVY    VDP T L+V QYPLRPLWRPYELDE C+EVRVKP+   VEIDLAVD  SKNYD
Sbjct: 121  DVYLNHSVDPNTCLHVWQYPLRPLWRPYELDEKCDEVRVKPSGEGVEIDLAVDTYSKNYD 180

Query: 1193 SGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESK 1014
            + ADP++QM+KQ L + W PPH SG AV VL GNKLYLNPIH VVQLRPS++HL++ +SK
Sbjct: 181  TTADPKLQMQKQTLRSTWMPPHASGQAVAVLVGNKLYLNPIHAVVQLRPSMKHLDAEDSK 240

Query: 1013 RK-TVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTAR 837
            +K T   SN  D+VK E+PQ                QTK    DWVPLKYHS  SD+ A 
Sbjct: 241  KKKTNARSNTKDSVKLEDPQPSGA------------QTKP---DWVPLKYHSARSDMAAT 285

Query: 836  YLQKMKAQE--GSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRTWL 663
            Y++KM A+E  GSQISFSMSS D++NSLCPG  SGSFSS  PPIR LL LPL+ERF+TWL
Sbjct: 286  YVKKMMAREVEGSQISFSMSSNDYINSLCPGTSSGSFSSNVPPIRSLLALPLKERFKTWL 345

Query: 662  LEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDY 483
            LE   VHRF+ALKHLAPDES+EEVL VLQD AR+VQGLW PKS LVYG D G+ VLARDY
Sbjct: 346  LEANTVHRFDALKHLAPDESIEEVLEVLQDLARLVQGLWFPKSRLVYGIDHGLDVLARDY 405

Query: 482  VLLLFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSV 303
            VL LFSKN II  SQLP RP LANAM DVLNVLAVER AF DWKL+  PD +F+K N S+
Sbjct: 406  VLALFSKNVIITNSQLPLRPQLANAMKDVLNVLAVERPAFDDWKLKASPDSNFMKFNQSI 465

Query: 302  VKKQEEEWECLEKRINDHVCGGRNRPGMRSSNTTNNPAT*KSS------------SKLAM 159
            VKK EEEW+ +EK+IND     +N+  MR SN    PA  KSS            S+ AM
Sbjct: 466  VKKHEEEWQGVEKKINDDFNVAKNKAAMR-SNAAKKPAIPKSSSNVETRTPNVSTSRTAM 524

Query: 158  AEEVREAITKALQKFLKVSRFC 93
            +++VREAI KALQK  K  + C
Sbjct: 525  SDDVREAIKKALQKLFKSVKVC 546


>gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Erythranthe guttata]
          Length = 525

 Score =  548 bits (1411), Expect = 0.0
 Identities = 313/563 (55%), Positives = 362/563 (64%), Gaps = 21/563 (3%)
 Frame = -1

Query: 1715 MADMDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEE 1536
            MADMDLD+LLD   + P R  RFAPKG K  P+PK EPSQ LPPSASD M++LP+PKKEE
Sbjct: 1    MADMDLDDLLDAKPRAPTRVVRFAPKGGKLNPKPKIEPSQPLPPSASDPMDTLPLPKKEE 60

Query: 1535 LG--IKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXE----I 1374
                I+ DIKPE+ N A+EM                                  E    I
Sbjct: 61   PKPEIEPDIKPEHANGAMEMDVEVKPDVKVKEDLMETEVAESVLDPVVKESTVDEVVREI 120

Query: 1373 DVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYD 1194
            DVY    VDP T L+V QYPLRPLWRPYELDE C+EVRVKP+   VEIDLAVD  SKNYD
Sbjct: 121  DVYLNHSVDPNTCLHVWQYPLRPLWRPYELDEKCDEVRVKPSGEGVEIDLAVDTYSKNYD 180

Query: 1193 SGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESK 1014
            + ADP++QM+KQ L + W PPH SG AV VL GNKLYLNPIH VVQLRPS++HL++ +SK
Sbjct: 181  TTADPKLQMQKQTLRSTWMPPHASGQAVAVLVGNKLYLNPIHAVVQLRPSMKHLDAEDSK 240

Query: 1013 RK-TVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTAR 837
            +K T   SN  D+VK E+PQ                QTK    DWVPLKYHS  SD+ A 
Sbjct: 241  KKKTNARSNTKDSVKLEDPQPSGA------------QTKP---DWVPLKYHSARSDMAAT 285

Query: 836  YLQKMKAQE--GSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRTWL 663
            Y++KM A+E  GSQISFSMSS D++NSLCPG  SGSFSS                     
Sbjct: 286  YVKKMMAREVEGSQISFSMSSNDYINSLCPGTSSGSFSSNANT----------------- 328

Query: 662  LEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDY 483
                 VHRF+ALKHLAPDES+EEVL VLQD AR+VQGLW PKS LVYG D G+ VLARDY
Sbjct: 329  -----VHRFDALKHLAPDESIEEVLEVLQDLARLVQGLWFPKSRLVYGIDHGLDVLARDY 383

Query: 482  VLLLFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSV 303
            VL LFSKN II  SQLP RP LANAM DVLNVLAVER AF DWKL+  PD +F+K N S+
Sbjct: 384  VLALFSKNVIITNSQLPLRPQLANAMKDVLNVLAVERPAFDDWKLKASPDSNFMKFNQSI 443

Query: 302  VKKQEEEWECLEKRINDHVCGGRNRPGMRSSNTTNNPAT*KSS------------SKLAM 159
            VKK EEEW+ +EK+IND     +N+  MR SN    PA  KSS            S+ AM
Sbjct: 444  VKKHEEEWQGVEKKINDDFNVAKNKAAMR-SNAAKKPAIPKSSSNVETRTPNVSTSRTAM 502

Query: 158  AEEVREAITKALQKFLKVSRFCR 90
            +++VREAI KALQK  K  + CR
Sbjct: 503  SDDVREAIKKALQKLFKSVKVCR 525


>emb|CDP02819.1| unnamed protein product [Coffea canephora]
          Length = 687

 Score =  544 bits (1402), Expect = 0.0
 Identities = 283/554 (51%), Positives = 358/554 (64%), Gaps = 16/554 (2%)
 Frame = -1

Query: 1706 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPI-PKKEELG 1530
            MD D+L D PS+ P RP+RFAPKGSKFKPR +   + S   +  + ++S P+ P      
Sbjct: 1    MDFDDL-DEPSQAPTRPSRFAPKGSKFKPRTEPVAATSNSIAKKEELDSKPVSPINSSTT 59

Query: 1529 IKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXEIDVYFTPFV 1350
              +    +  + ++                                    EIDVY TP +
Sbjct: 60   AAAGKAEDAASASVSQSVAMDVDAKVEEEAEQPKDEPMESREEGEDEIVREIDVYLTPSI 119

Query: 1349 DPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQ 1170
            DP T+LYVLQYPLRPLWRPYELD+ CEEVRVK  SAEVE+DLAVDVDSKNYDS ADPRV 
Sbjct: 120  DPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKSKSAEVEVDLAVDVDSKNYDSDADPRVS 179

Query: 1169 MKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSN 990
            M KQ LT+ WKPP  +G+AVGVL GNKL+LNPIH VVQLRPS+QH +   SKR+T  SSN
Sbjct: 180  MTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSN 239

Query: 989  VNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQE 810
            + D  K EE               + EQ KD+ EDW+PL YH   SD++  Y++KM   +
Sbjct: 240  LEDNTKGEEVTTGSLKKQGKSSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHD 299

Query: 809  GSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRTWLLEGPPVHRFEA 630
             S I FSM+ +D++N+LCPG  + +  S GP  R LL+LPL ERFRTWLL+GPP+HRF+A
Sbjct: 300  SSHIQFSMNRHDYVNTLCPGTSNENNGSNGPSRRVLLSLPLEERFRTWLLQGPPIHRFDA 359

Query: 629  LKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLLLFSKNAII 450
            LKHLAPD SVE++L VL  HA++VQGLW+PKS L+YG DQGI  LARDYVLLLFS+  II
Sbjct: 360  LKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPII 419

Query: 449  HKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSVVKKQEEEWECL 270
            + SQLP +  L  AM DVLN +A ER +  DWK +E PD++F+K N  +V++QE+ WE L
Sbjct: 420  NNSQLPQQQKLNRAMRDVLNTVAFERASLNDWKFKEPPDMTFIKLNSKIVREQEQTWERL 479

Query: 269  EKRINDHVCGGRNRPGMRSSN---TTNNPAT*KSSSKLA------------MAEEVREAI 135
            EK I + + G +NRP  ++S+   TTNNPAT KS SK A            M+EE REA+
Sbjct: 480  EKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREAL 539

Query: 134  TKALQKFLKVSRFC 93
             KALQK  +  + C
Sbjct: 540  PKALQKLFQSHKVC 553


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  536 bits (1382), Expect = 0.0
 Identities = 283/554 (51%), Positives = 359/554 (64%), Gaps = 16/554 (2%)
 Frame = -1

Query: 1706 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPI-PKKEELG 1530
            MD D+L D PS+ P RP+RFAPKGSKFKPR +   + S   +  + ++S P+ P      
Sbjct: 1    MDFDDL-DEPSQAPTRPSRFAPKGSKFKPRTEPVAATSNSIAKKEELDSKPVSPINSSTT 59

Query: 1529 IKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXEIDVYFTPFV 1350
              +    +  + ++                                    EIDVY TP +
Sbjct: 60   AAAGKAEDAASASVSQSVAMDVDAKVEEEAEQPKDEPMESREEGEDEIVREIDVYLTPSI 119

Query: 1349 DPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQ 1170
            DP T+LYVLQYPLRPLWRPYELD+ CEEVRVK  SAEVE+DLAVDVDSKNYDS ADPRV 
Sbjct: 120  DPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDADPRVS 179

Query: 1169 MKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSSN 990
            M KQ LT+ WKPP  +G+AVGVL GNKL+LNPIH VVQLRPS+QH +   SKR+T  SSN
Sbjct: 180  MTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSN 239

Query: 989  VNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMKAQE 810
            + D  K EE               + EQ KD+ EDW+PL YH   SD++  Y++KM   +
Sbjct: 240  LEDNTKGEEVTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHD 299

Query: 809  GSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRTWLLEGPPVHRFEA 630
             S I FSM+ +D++N+LCPG  + +  S GP  R LL+LPL ERFRTWLL+GPP+HRF+A
Sbjct: 300  SSHIQFSMN-HDYVNTLCPGTSNENNGSNGPS-RVLLSLPLEERFRTWLLQGPPIHRFDA 357

Query: 629  LKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLLLFSKNAII 450
            LKHLAPD SVE++L VL  HA++VQGLW+PKS L+YG DQGI  LARDYVLLLFS+  II
Sbjct: 358  LKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPII 417

Query: 449  HKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSVVKKQEEEWECL 270
            + SQLP +  L  AM DVL+ +A ER +  DWK +E PD++F+K NP +V++QE+ WE L
Sbjct: 418  NNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVREQEQTWERL 477

Query: 269  EKRINDHVCGGRNRPGMRSSN---TTNNPAT*KSSSKLA------------MAEEVREAI 135
            EK I + + G +NRP  ++S+   TTNNPAT KS SK A            M+EE REA+
Sbjct: 478  EKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREAL 537

Query: 134  TKALQKFLKVSRFC 93
             KALQK  +  + C
Sbjct: 538  PKALQKLFQSHKVC 551


>ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
            [Vitis vinifera] gi|297735187|emb|CBI17549.3| unnamed
            protein product [Vitis vinifera]
          Length = 688

 Score =  463 bits (1191), Expect = e-152
 Identities = 269/563 (47%), Positives = 346/563 (61%), Gaps = 25/563 (4%)
 Frame = -1

Query: 1706 MDLDELLDGPSKGP-NRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEELG 1530
            MDLD+L DGP++ P  RP+RFAPK SK K  PK EPS    PS  D +    I KKEE  
Sbjct: 1    MDLDDL-DGPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-- 55

Query: 1529 IKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXE--IDVYFTP 1356
               D +P  V  A E                                      IDV+FTP
Sbjct: 56   ---DSQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTP 112

Query: 1355 F-VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADP 1179
               D  T++YVLQYPLRP WRPYEL E C+EVRVKP SAEVE+DL++DVDSKNYD  A  
Sbjct: 113  PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172

Query: 1178 RVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVG 999
              +MKKQ L+  WKPP  +G+ VGVL GNKL+LNPIH VVQLRPS+++L S  +KRK   
Sbjct: 173  AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232

Query: 998  SSNVNDTVK----SEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARYL 831
            + + N  VK    +EE               + EQ  D+ E WVPLKYHS+ SD +ARYL
Sbjct: 233  TGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYL 292

Query: 830  QKMKAQEGSQISFSMSSYDHLNSLCP-GAYSGSFSSKGPPIRFLLTLPLRERFRTWLLEG 654
            QKM A++ S I F MS Y+++NSLCP G  +    SKG   RFLL++PL ERF+T L EG
Sbjct: 293  QKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEG 352

Query: 653  PPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLL 474
            PPVHRF ALKH APD SVE+VLGVL  HA +VQGLWVPKS L++   QG+A LARDY+LL
Sbjct: 353  PPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILL 412

Query: 473  LFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSVVKK 294
            LFSK  +I+ SQ+    +L  A+   L++LAVER +F+DWK +E  D+SF+K +P +V++
Sbjct: 413  LFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVRE 472

Query: 293  QEEEWECLEKRINDHV-CGGRNRPGMRSS-----------NTTNNPAT*KSSS----KLA 162
            Q   WE LEK+I D +  GGR  P  ++S           +T ++ AT  ++     + A
Sbjct: 473  QRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTA 532

Query: 161  MAEEVREAITKALQKFLKVSRFC 93
            M+ E REA+ KAL++  ++ + C
Sbjct: 533  MSAETREALPKALEEVFRLHKVC 555


>ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Vitis vinifera] gi|731387214|ref|XP_010649169.1|
            PREDICTED: DNA-directed RNA polymerase III subunit RPC5
            isoform X1 [Vitis vinifera]
          Length = 693

 Score =  457 bits (1177), Expect = e-149
 Identities = 269/568 (47%), Positives = 347/568 (61%), Gaps = 30/568 (5%)
 Frame = -1

Query: 1706 MDLDELLDGPSKGP-NRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEELG 1530
            MDLD+L DGP++ P  RP+RFAPK SK K  PK EPS    PS  D +    I KKEE  
Sbjct: 1    MDLDDL-DGPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-- 55

Query: 1529 IKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXE--IDVYFTP 1356
               D +P  V  A E                                      IDV+FTP
Sbjct: 56   ---DSQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTP 112

Query: 1355 F-VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADP 1179
               D  T++YVLQYPLRP WRPYEL E C+EVRVKP SAEVE+DL++DVDSKNYD  A  
Sbjct: 113  PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172

Query: 1178 RVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVG 999
              +MKKQ L+  WKPP  +G+ VGVL GNKL+LNPIH VVQLRPS+++L S  +KRK   
Sbjct: 173  AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232

Query: 998  SSNVNDTVK----SEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARYL 831
            + + N  VK    +EE               + EQ  D+ E WVPLKYHS+ SD +ARYL
Sbjct: 233  TGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYL 292

Query: 830  QKMKAQEGSQISFSMSSYDHLNSLC-PGAYSGSFSSKGPPIRFLLTLPLRERFRTWL--- 663
            QKM A++ S I F MS Y+++NSLC PG  +    SKG   RFLL++PL ERF+T L   
Sbjct: 293  QKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEK 352

Query: 662  --LEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLAR 489
              L+GPPVHRF ALKH APD SVE+VLGVL  HA +VQGLWVPKS L++   QG+A LAR
Sbjct: 353  FSLQGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLAR 412

Query: 488  DYVLLLFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNP 309
            DY+LLLFSK  +I+ SQ+    +L  A+   L++LAVER +F+DWK +E  D+SF+K +P
Sbjct: 413  DYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHP 472

Query: 308  SVVKKQEEEWECLEKRINDHV-CGGRNRPGMRSS-----------NTTNNPAT*KSSS-- 171
             +V++Q   WE LEK+I D +  GGR  P  ++S           +T ++ AT  ++   
Sbjct: 473  DIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTP 532

Query: 170  --KLAMAEEVREAITKALQKFLKVSRFC 93
              + AM+ E REA+ KAL++  ++ + C
Sbjct: 533  VRRTAMSAETREALPKALEEVFRLHKVC 560


>ref|XP_009794022.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Nicotiana sylvestris]
          Length = 681

 Score =  456 bits (1174), Expect = e-149
 Identities = 261/556 (46%), Positives = 343/556 (61%), Gaps = 15/556 (2%)
 Frame = -1

Query: 1715 MADMDLDELLDGPSKGPNRPARFAPKGSKFKPRPK--AEPSQSLPPSASDSMESLPIP-K 1545
            MA+MDLD   DGPSK P RP+RFAPK SK KP+P+   +P    P S+SD     PIP K
Sbjct: 1    MAEMDLD--FDGPSKAPTRPSRFAPKSSKLKPQPQQVTKPKPETPLSSSDP----PIPTK 54

Query: 1544 KEELGIKSDIKPEYV-NDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXEIDV 1368
            KEEL  K  +K     N A  +                                  EIDV
Sbjct: 55   KEELVSKPSVKDHPAENGAAMVKDDVPLDENTTGDDVAEEEQVTMDTDSVEDEVVREIDV 114

Query: 1367 YFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSG 1188
            +FTP  DP ++LYV QYPLR +WRPYEL+E C+EVR++P++A++E+DLAVD DSKN+D  
Sbjct: 115  FFTPSSDPNSQLYVFQYPLRSVWRPYELEERCQEVRLRPSTAQMEVDLAVDFDSKNFDRD 174

Query: 1187 ADPRVQMKKQILTALWKPPHI--SGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESK 1014
            +   V+M+KQ L+  W P     SG+AVGVL G+KL+LNPIH VVQLRPS QHL+  E K
Sbjct: 175  SVHAVKMEKQTLSTSWMPLSTCTSGYAVGVLIGDKLHLNPIHAVVQLRPSQQHLKESELK 234

Query: 1013 RKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARY 834
            +K + + +   TV+++E +E           K P   KD EE WV LKYH   SD++ARY
Sbjct: 235  KKNIATGSDGKTVENKEVEEKKPAGPSKKQNKPPGNVKDIEEHWVHLKYHGARSDISARY 294

Query: 833  LQKMKAQEGSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRTWLLEG 654
            LQ+M  +EGS +SFSMS  D+LN++CPG  + +   K    R L  LPL ER RTWLLEG
Sbjct: 295  LQEMAMEEGSPVSFSMSPIDYLNAVCPGRPTDTDRLKILRTR-LSQLPLEERIRTWLLEG 353

Query: 653  PPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLL 474
            PP+HRF+ALKHLA D+ V+E+L VLQ +A++VQGLWVPKS L+YG + G+ VLAR+++L 
Sbjct: 354  PPIHRFDALKHLALDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILF 413

Query: 473  LFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSVVKK 294
             FSK+ II +     R     A    L  LAVER    DWKL+E PD  F      VVK+
Sbjct: 414  EFSKSTIIKQKVFARRLDFLKAAKPTLKSLAVERLDLNDWKLKEHPDKKFEVLYGDVVKE 473

Query: 293  QEEEWECLEKRINDHVCGGRNRPGMRSSNTTNN---------PAT*KSSSKLAMAEEVRE 141
            Q+  WEC+ K+IN  + GGRN+P M++ N+  N         PA   S S+ +M+E+ RE
Sbjct: 474  QQATWECMGKQINGILSGGRNKPPMKNLNSNANIPALPGGGKPAP-GSLSRTSMSEKTRE 532

Query: 140  AITKALQKFLKVSRFC 93
            A+ KALQK  ++ + C
Sbjct: 533  ALPKALQKVFRIYKAC 548


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4
            [Vitis vinifera]
          Length = 672

 Score =  454 bits (1168), Expect = e-148
 Identities = 267/561 (47%), Positives = 345/561 (61%), Gaps = 23/561 (4%)
 Frame = -1

Query: 1706 MDLDELLDGPSKGP-NRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEELG 1530
            MDLD+L DGP++ P  RP+RFAPK SK K  PK EPS    PS  D +    I KKEE  
Sbjct: 1    MDLDDL-DGPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-- 55

Query: 1529 IKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXE--IDVYFTP 1356
               D +P  V  A E                                      IDV+FTP
Sbjct: 56   ---DSQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTP 112

Query: 1355 F-VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADP 1179
               D  T++YVLQYPLRP WRPYEL E C+EVRVKP SAEVE+DL++DVDSKNYD  A  
Sbjct: 113  PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172

Query: 1178 RVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVG 999
              +MKKQ L+  WKPP  +G+ VGVL GNKL+LNPIH VVQLRPS+++L S  +KRK   
Sbjct: 173  AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232

Query: 998  SSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDS--EEDWVPLKYHSTGSDLTARYLQK 825
            + + N  VK E   E              E++  S  ++ WVPLKYHS+ SD +ARYLQK
Sbjct: 233  TGDTNSAVKLEVSNE--------------EESVGSLKKQSWVPLKYHSSESDFSARYLQK 278

Query: 824  MKAQEGSQISFSMSSYDHLNSLCP-GAYSGSFSSKGPPIRFLLTLPLRERFRTWLLEGPP 648
            M A++ S I F MS Y+++NSLCP G  +    SKG   RFLL++PL ERF+T L EGPP
Sbjct: 279  MVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPP 338

Query: 647  VHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLLLF 468
            VHRF ALKH APD SVE+VLGVL  HA +VQGLWVPKS L++   QG+A LARDY+LLLF
Sbjct: 339  VHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLF 398

Query: 467  SKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSVVKKQE 288
            SK  +I+ SQ+    +L  A+   L++LAVER +F+DWK +E  D+SF+K +P +V++Q 
Sbjct: 399  SKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQR 458

Query: 287  EEWECLEKRINDHV-CGGRNRPGMRSS-----------NTTNNPAT*KSSS----KLAMA 156
              WE LEK+I D +  GGR  P  ++S           +T ++ AT  ++     + AM+
Sbjct: 459  RVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMS 518

Query: 155  EEVREAITKALQKFLKVSRFC 93
             E REA+ KAL++  ++ + C
Sbjct: 519  AETREALPKALEEVFRLHKVC 539


>ref|XP_009621596.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Nicotiana tomentosiformis]
          Length = 584

 Score =  451 bits (1159), Expect = e-148
 Identities = 256/558 (45%), Positives = 340/558 (60%), Gaps = 16/558 (2%)
 Frame = -1

Query: 1715 MADMDLDELLDGPSKGPNRPARFAPKGSKFKPRPK--AEPSQSLPPSASDSMESLPIP-K 1545
            MA+MDLD   DGPSK P RP+RFAPK SK KP+P+   +P    P S+SD     PIP K
Sbjct: 1    MAEMDLD--FDGPSKAPTRPSRFAPKSSKLKPQPQPVTKPKPGTPSSSSDP----PIPTK 54

Query: 1544 KEELGIKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXE-IDV 1368
            KEEL  K  +K     +   M               +                    IDV
Sbjct: 55   KEELVSKPSVKDHPAENGAAMGKDDVPLDENTTGDDMAEEEQIAMDTDSVEDEVVREIDV 114

Query: 1367 YFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSG 1188
             FTP  DP  +LYV QYPLRP+WRPYEL+E C+EVR++P++A++E+DLA+D DSKN+D  
Sbjct: 115  CFTPSSDPDNQLYVFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAIDFDSKNFDRD 174

Query: 1187 ADPRVQMKKQILTALWKPPHI--SGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESK 1014
            +   V+M+KQ L+  W P     SG+AVGVL G++L+LNPIH VVQLRPS QHL+  E K
Sbjct: 175  SVHAVKMEKQTLSTSWMPLSTCTSGYAVGVLIGDELHLNPIHAVVQLRPSQQHLKESELK 234

Query: 1013 RKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARY 834
            +K + +S+   TV+ ++ +E           K P   KD EE WV LKYH   SD++ARY
Sbjct: 235  KKNIATSSDGKTVEKKDVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARY 294

Query: 833  LQKMKAQEGSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRTWLLEG 654
            LQ+M  +EGS + FSMS  D+LN++CPG  + +   K    R L  LPL ER RTWLLEG
Sbjct: 295  LQEMAMEEGSPVPFSMSPVDYLNAVCPGRPTDTDRLKILRTR-LSQLPLEERIRTWLLEG 353

Query: 653  PPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLL 474
            PP+HRF+ALKHLA D+ V+E+L VLQ +A++VQGLWVPKS L+YG + G+ VLAR+++L 
Sbjct: 354  PPIHRFDALKHLALDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILF 413

Query: 473  LFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSVVKK 294
             FSK+ II +     R     A    L  LAVER    DWKL+E PD  F      VVK+
Sbjct: 414  EFSKSTIIKQKVFARRLDFLKAAKPTLKSLAVERPDLIDWKLKEHPDKKFEVLYGDVVKE 473

Query: 293  QEEEWECLEKRINDHVCGGRNRPGMRSSNTTNN----------PAT*KSSSKLAMAEEVR 144
            Q+  WEC+ K+IN  + GGRNRP +++   +N+          PA   S  + +M+E+ R
Sbjct: 474  QQATWECMGKQINGILSGGRNRPALKNPLNSNDNIPALPGGGTPAP-GSLLRTSMSEKTR 532

Query: 143  EAITKALQKFLKVSRFCR 90
            EA+ KALQK  ++ + CR
Sbjct: 533  EALPKALQKVFRIYKACR 550


>ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
            [Vitis vinifera]
          Length = 677

 Score =  449 bits (1154), Expect = e-146
 Identities = 267/566 (47%), Positives = 346/566 (61%), Gaps = 28/566 (4%)
 Frame = -1

Query: 1706 MDLDELLDGPSKGP-NRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEELG 1530
            MDLD+L DGP++ P  RP+RFAPK SK K  PK EPS    PS  D +    I KKEE  
Sbjct: 1    MDLDDL-DGPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-- 55

Query: 1529 IKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXE--IDVYFTP 1356
               D +P  V  A E                                      IDV+FTP
Sbjct: 56   ---DSQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTP 112

Query: 1355 F-VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADP 1179
               D  T++YVLQYPLRP WRPYEL E C+EVRVKP SAEVE+DL++DVDSKNYD  A  
Sbjct: 113  PPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPN 172

Query: 1178 RVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVG 999
              +MKKQ L+  WKPP  +G+ VGVL GNKL+LNPIH VVQLRPS+++L S  +KRK   
Sbjct: 173  AQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNV 232

Query: 998  SSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDS--EEDWVPLKYHSTGSDLTARYLQK 825
            + + N  VK E   E              E++  S  ++ WVPLKYHS+ SD +ARYLQK
Sbjct: 233  TGDTNSAVKLEVSNE--------------EESVGSLKKQSWVPLKYHSSESDFSARYLQK 278

Query: 824  MKAQEGSQISFSMSSYDHLNSLC-PGAYSGSFSSKGPPIRFLLTLPLRERFRTWL----- 663
            M A++ S I F MS Y+++NSLC PG  +    SKG   RFLL++PL ERF+T L     
Sbjct: 279  MVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEKFS 338

Query: 662  LEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDY 483
            L+GPPVHRF ALKH APD SVE+VLGVL  HA +VQGLWVPKS L++   QG+A LARDY
Sbjct: 339  LQGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDY 398

Query: 482  VLLLFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSV 303
            +LLLFSK  +I+ SQ+    +L  A+   L++LAVER +F+DWK +E  D+SF+K +P +
Sbjct: 399  ILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDI 458

Query: 302  VKKQEEEWECLEKRINDHV-CGGRNRPGMRSS-----------NTTNNPAT*KSSS---- 171
            V++Q   WE LEK+I D +  GGR  P  ++S           +T ++ AT  ++     
Sbjct: 459  VREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVR 518

Query: 170  KLAMAEEVREAITKALQKFLKVSRFC 93
            + AM+ E REA+ KAL++  ++ + C
Sbjct: 519  RTAMSAETREALPKALEEVFRLHKVC 544


>ref|XP_009621595.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Nicotiana tomentosiformis]
          Length = 682

 Score =  449 bits (1154), Expect = e-146
 Identities = 255/557 (45%), Positives = 339/557 (60%), Gaps = 16/557 (2%)
 Frame = -1

Query: 1715 MADMDLDELLDGPSKGPNRPARFAPKGSKFKPRPK--AEPSQSLPPSASDSMESLPIP-K 1545
            MA+MDLD   DGPSK P RP+RFAPK SK KP+P+   +P    P S+SD     PIP K
Sbjct: 1    MAEMDLD--FDGPSKAPTRPSRFAPKSSKLKPQPQPVTKPKPGTPSSSSDP----PIPTK 54

Query: 1544 KEELGIKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXE-IDV 1368
            KEEL  K  +K     +   M               +                    IDV
Sbjct: 55   KEELVSKPSVKDHPAENGAAMGKDDVPLDENTTGDDMAEEEQIAMDTDSVEDEVVREIDV 114

Query: 1367 YFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSG 1188
             FTP  DP  +LYV QYPLRP+WRPYEL+E C+EVR++P++A++E+DLA+D DSKN+D  
Sbjct: 115  CFTPSSDPDNQLYVFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAIDFDSKNFDRD 174

Query: 1187 ADPRVQMKKQILTALWKPPHI--SGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESK 1014
            +   V+M+KQ L+  W P     SG+AVGVL G++L+LNPIH VVQLRPS QHL+  E K
Sbjct: 175  SVHAVKMEKQTLSTSWMPLSTCTSGYAVGVLIGDELHLNPIHAVVQLRPSQQHLKESELK 234

Query: 1013 RKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARY 834
            +K + +S+   TV+ ++ +E           K P   KD EE WV LKYH   SD++ARY
Sbjct: 235  KKNIATSSDGKTVEKKDVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARY 294

Query: 833  LQKMKAQEGSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRTWLLEG 654
            LQ+M  +EGS + FSMS  D+LN++CPG  + +   K    R L  LPL ER RTWLLEG
Sbjct: 295  LQEMAMEEGSPVPFSMSPVDYLNAVCPGRPTDTDRLKILRTR-LSQLPLEERIRTWLLEG 353

Query: 653  PPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLL 474
            PP+HRF+ALKHLA D+ V+E+L VLQ +A++VQGLWVPKS L+YG + G+ VLAR+++L 
Sbjct: 354  PPIHRFDALKHLALDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILF 413

Query: 473  LFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSVVKK 294
             FSK+ II +     R     A    L  LAVER    DWKL+E PD  F      VVK+
Sbjct: 414  EFSKSTIIKQKVFARRLDFLKAAKPTLKSLAVERPDLIDWKLKEHPDKKFEVLYGDVVKE 473

Query: 293  QEEEWECLEKRINDHVCGGRNRPGMRSSNTTNN----------PAT*KSSSKLAMAEEVR 144
            Q+  WEC+ K+IN  + GGRNRP +++   +N+          PA   S  + +M+E+ R
Sbjct: 474  QQATWECMGKQINGILSGGRNRPALKNPLNSNDNIPALPGGGTPAP-GSLLRTSMSEKTR 532

Query: 143  EAITKALQKFLKVSRFC 93
            EA+ KALQK  ++ + C
Sbjct: 533  EALPKALQKVFRIYKAC 549


>ref|XP_009608223.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Nicotiana tomentosiformis]
          Length = 681

 Score =  446 bits (1147), Expect = e-145
 Identities = 260/556 (46%), Positives = 340/556 (61%), Gaps = 15/556 (2%)
 Frame = -1

Query: 1715 MADMDLDELLDGPSKGPNRPARFAPKGSKFKPRPK--AEPSQSLPPSASDSMESLPIP-K 1545
            MA+MDLD   DGPSK   RP+RFAPK SK KP+P+   +P    P S+SD     PIP K
Sbjct: 1    MAEMDLD--FDGPSKASTRPSRFAPKSSKLKPQPQPVTKPKPETPLSSSDP----PIPTK 54

Query: 1544 KEELGIKSDIKPEYV-NDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXEIDV 1368
            KEEL  K  +K     N A                                     EIDV
Sbjct: 55   KEELFSKPSVKDHPAENGAAVGKDDVPLDENTTGDDVSEEEQVAMDTDSVDDEVVREIDV 114

Query: 1367 YFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSG 1188
            +FTP  DP ++LYV QYPLRP+WRPYEL+E C+EVR++P++A++E+DLAVD+DSKN+D  
Sbjct: 115  FFTPSSDPNSQLYVFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAVDLDSKNFDRD 174

Query: 1187 ADPRVQMKKQILTALWKPPHI--SGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESK 1014
            +   V+M+KQ L+  W P     SG+AVGVL G+KL+LNPIH VVQLRPS QHL+  E K
Sbjct: 175  SVHAVKMEKQTLSTSWMPLSTCTSGYAVGVLIGDKLHLNPIHAVVQLRPSQQHLKESELK 234

Query: 1013 RKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARY 834
             K + +S+   TV+++E +E           K P   KD EE WV LKYH   SD++ARY
Sbjct: 235  -KNIATSSDGKTVENKEVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARY 293

Query: 833  LQKMKAQEGSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRTWLLEG 654
            LQ++   EGS +SFSMS  D+LN++CPG  + +   K    R L  LPL ER RTWLLEG
Sbjct: 294  LQEIAMAEGSPVSFSMSPVDYLNAVCPGRPTDTDRLKILRTR-LSQLPLEERIRTWLLEG 352

Query: 653  PPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLL 474
            PP+HRF+ALKHLA D+ V+E+L VLQ +A++VQGLWVPKS L+YG + G+ VLAR+++L 
Sbjct: 353  PPIHRFDALKHLALDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILF 412

Query: 473  LFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSVVKK 294
             FSK+ II +     R     A    L  LAVER    DWKL+E PD  F      VVK+
Sbjct: 413  EFSKSTIIKQKVFARRLDFLKAAKPTLKSLAVERPDLNDWKLKEHPDKKFEVLYGDVVKE 472

Query: 293  QEEEWECLEKRINDHVCGGRNRPGMRS--SNTTNNPA-------T*KSSSKLAMAEEVRE 141
            Q+  WEC+ K+IN  + GGRNRP M++  +   N PA          S  + +M+E+ RE
Sbjct: 473  QQATWECMGKQINGILSGGRNRPAMKNPLNPNANIPALPGGGKPAPGSLLRTSMSEKTRE 532

Query: 140  AITKALQKFLKVSRFC 93
            A+ KALQK  ++ + C
Sbjct: 533  ALPKALQKVFRIYKAC 548


>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
            gi|508699252|gb|EOX91148.1| SIN-like family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  444 bits (1142), Expect = e-144
 Identities = 261/579 (45%), Positives = 331/579 (57%), Gaps = 32/579 (5%)
 Frame = -1

Query: 1706 MDLDEL--LDGPSKGPNRPARFAPKGSKFKPRPKA------EPSQSLPPSASDSMESLPI 1551
            MDLD+L  LDGPS+   R  +FAPK SKF PR K       EPS    P  S      P 
Sbjct: 1    MDLDDLGELDGPSQVNTRTTKFAPKSSKFAPRLKPNFKLKPEPSSKQEPLNSGPKPEPPP 60

Query: 1550 PKKEELGIKS-----DIKPEYVNDA-IEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXX 1389
            P  E +  K      DIKP  + +   E                                
Sbjct: 61   PPPESISRKKENEEEDIKPPVIAETKTEQSFSNGAVKMEIEEEAKEDVIMNEGNREEEDM 120

Query: 1388 XXXEIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVD 1209
               EIDV+FTP +D  T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAVDVD
Sbjct: 121  VVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVD 180

Query: 1208 SKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLE 1029
            S NYDS    R++M KQ L++ W PP  +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+
Sbjct: 181  SNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLK 240

Query: 1028 SRESKRKTVGSSNVNDTVKSEEPQE----XXXXXXXXXXXKIPEQTKDSEEDWVPLKYHS 861
               SKRK   +++   TVK EEP +                  EQ  D +E WVPLKYHS
Sbjct: 241  PSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHS 300

Query: 860  TGSDLTARYLQKMKAQEGSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRE 681
            + +D +A+YLQ+M A+E  +I F+MS YD+++SLCPGA S +  ++GP  R LL++PL E
Sbjct: 301  SKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSRRLLLSIPLEE 359

Query: 680  RFRTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIA 501
            R +  L EGPP HRF ALKH APD S+E++  VLQ HA +VQGLWVPKS L++  D    
Sbjct: 360  RLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YK 418

Query: 500  VLARDYVLLLFSKNAIIHKSQL-PTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSF 324
             LARDYVLLLFSKN II  +Q+    P+    +   L +LA+ER +FKDWKL+E  D  F
Sbjct: 419  SLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGF 478

Query: 323  VKSNPSVVKKQEEEWECLEKRINDHVC-GGRNRPGMRSSNTTNNPAT*KSSSK------- 168
             K  P +VK QE+ W   E  + +H+C G +  P      T   P    +S K       
Sbjct: 479  KKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAP 538

Query: 167  -----LAMAEEVREAITKALQKFLKVSRFCR*DTFKRSL 66
                   M++E REAI KAL+K  +  + C     ++ L
Sbjct: 539  AVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGL 577


>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao] gi|508699254|gb|EOX91150.1|
            Transcription regulators,zinc ion binding, putative
            isoform 3 [Theobroma cacao]
          Length = 736

 Score =  444 bits (1142), Expect = e-144
 Identities = 261/579 (45%), Positives = 331/579 (57%), Gaps = 32/579 (5%)
 Frame = -1

Query: 1706 MDLDEL--LDGPSKGPNRPARFAPKGSKFKPRPKA------EPSQSLPPSASDSMESLPI 1551
            MDLD+L  LDGPS+   R  +FAPK SKF PR K       EPS    P  S      P 
Sbjct: 1    MDLDDLGELDGPSQVNTRTTKFAPKSSKFAPRLKPNFKLKPEPSSKQEPLNSGPKPEPPP 60

Query: 1550 PKKEELGIKS-----DIKPEYVNDA-IEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXX 1389
            P  E +  K      DIKP  + +   E                                
Sbjct: 61   PPPESISRKKENEEEDIKPPVIAETKTEQSFSNGAVKMEIEEEAKEDVIMNEGNREEEDM 120

Query: 1388 XXXEIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVD 1209
               EIDV+FTP +D  T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAVDVD
Sbjct: 121  VVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVD 180

Query: 1208 SKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLE 1029
            S NYDS    R++M KQ L++ W PP  +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+
Sbjct: 181  SNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLK 240

Query: 1028 SRESKRKTVGSSNVNDTVKSEEPQE----XXXXXXXXXXXKIPEQTKDSEEDWVPLKYHS 861
               SKRK   +++   TVK EEP +                  EQ  D +E WVPLKYHS
Sbjct: 241  PSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHS 300

Query: 860  TGSDLTARYLQKMKAQEGSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRE 681
            + +D +A+YLQ+M A+E  +I F+MS YD+++SLCPGA S +  ++GP  R LL++PL E
Sbjct: 301  SKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSRRLLLSIPLEE 359

Query: 680  RFRTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIA 501
            R +  L EGPP HRF ALKH APD S+E++  VLQ HA +VQGLWVPKS L++  D    
Sbjct: 360  RLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YK 418

Query: 500  VLARDYVLLLFSKNAIIHKSQL-PTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSF 324
             LARDYVLLLFSKN II  +Q+    P+    +   L +LA+ER +FKDWKL+E  D  F
Sbjct: 419  SLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGF 478

Query: 323  VKSNPSVVKKQEEEWECLEKRINDHVC-GGRNRPGMRSSNTTNNPAT*KSSSK------- 168
             K  P +VK QE+ W   E  + +H+C G +  P      T   P    +S K       
Sbjct: 479  KKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAP 538

Query: 167  -----LAMAEEVREAITKALQKFLKVSRFCR*DTFKRSL 66
                   M++E REAI KAL+K  +  + C     ++ L
Sbjct: 539  AVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGL 577


>ref|XP_015578439.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Ricinus
            communis]
          Length = 699

 Score =  436 bits (1120), Expect = e-141
 Identities = 255/573 (44%), Positives = 343/573 (59%), Gaps = 35/573 (6%)
 Frame = -1

Query: 1706 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQS----LPPSASDSME--SLPIPK 1545
            MD  + LD PS+ P+RP+++APK +KFKP+PK +P+      LP S S+  E  + P+ K
Sbjct: 1    MDGLDDLDKPSQVPSRPSKYAPKSAKFKPQPKTKPNPKPDPQLPSSNSELQEPQNAPLSK 60

Query: 1544 KEELGIKSDIKPEYV----NDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXE 1377
            K E   + +IKP+ +    N+A                                     E
Sbjct: 61   KNEDDEEEEIKPKIISTPKNEAWLSNNGAVKMEIDDSMDEDKREEGENEEEEEEDMIVRE 120

Query: 1376 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 1197
            IDV+FTP +D  T+LYV+QYPLRP WRPYELDE CEEVRVKP S EVE+DL +D DS N+
Sbjct: 121  IDVFFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNW 179

Query: 1196 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 1017
            D     +   KKQ L+  + PP ++G+AVGVL GNKL+LNPIH VVQLRPS++H+ S +S
Sbjct: 180  DPAQASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDS 239

Query: 1016 KRKTVGSSNVNDTVKSEEPQEXXXXXXXXXXXKIPE----QTKDSEEDWVPLKYHSTGSD 849
            KRK   S+ +N  VK E+  E           K  E    Q  DSEE W+ LKYH + SD
Sbjct: 240  KRKN--SATLNPEVKLEDSNEGKPIGSSKKQIKRMEVTNNQISDSEECWISLKYHGSKSD 297

Query: 848  LTARYLQKMKAQEGSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRT 669
             ++RYL+KM AQE S + F+M+ YD+++SLCP A +    SKGPP RFLL+LPL ER + 
Sbjct: 298  FSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKK 357

Query: 668  WLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVY---GTDQGIAV 498
             +LEGPPV RF  LKH APD+SVE+VL VLQ++ ++VQGLW PKS L++    + QGI  
Sbjct: 358  LILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFPDANSKQGI-- 415

Query: 497  LARDYVLLLFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVK 318
              RDYVLLLFSKN +I+ SQ+     +   +   LN+ AVER +FKDWK +E  D +F+K
Sbjct: 416  --RDYVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIK 473

Query: 317  SNPSVVKKQEEEWECLEKRINDHVCGGRNRPGMRSS--------NTTNNPAT*KSSSKLA 162
              P +VKKQEE W+  EKR++  V     +  M+++        NT  +  + KS  K+A
Sbjct: 474  LYPDIVKKQEEAWDNTEKRLS-KVFDRSGKASMKNAIPKPPMVHNTVKHLDSEKSMPKIA 532

Query: 161  ----------MAEEVREAITKALQKFLKVSRFC 93
                      +  E REA+ KAL K  +  + C
Sbjct: 533  SGMRRLTKTTITVETREALLKALPKVFQSHKVC 565


>ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X4 [Solanum tuberosum]
          Length = 536

 Score =  430 bits (1105), Expect = e-141
 Identities = 249/552 (45%), Positives = 335/552 (60%), Gaps = 13/552 (2%)
 Frame = -1

Query: 1706 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPS-QSLPPSASDSMESLPIPKKEELG 1530
            MDLD   DGPSK P R +RFAPK SK KP+P+ +P  ++LP S     +S  + KKEEL 
Sbjct: 1    MDLD--FDGPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPHS-----DSAILTKKEELS 53

Query: 1529 IK-SDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXEIDVYFTPF 1353
            +  ++      ND + +                +                 EIDV   P 
Sbjct: 54   VSLAENGAVTGNDDVPLEGETTGNY--------LGEDEGQVTDSDHDEVVREIDVCINPS 105

Query: 1352 VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRV 1173
             DP T+LYV QYPLR +WRPYEL+E C+EVR++P++AE+E+DLA+D+DSKN+D  +    
Sbjct: 106  FDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAA 165

Query: 1172 QMKKQILTALWKP--PHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVG 999
             +KKQ+L+  W P     SG+AVGVL G+KL+LNP+H VVQLRPS ++L+  E K K V 
Sbjct: 166  TIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-KNVT 224

Query: 998  SSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMK 819
            ++N   +V++E+ +E           K P   KD  E W+ LKYH   SD++ARYLQKM 
Sbjct: 225  TNNDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQKMA 284

Query: 818  AQEGSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRTWLLEGPPVHR 639
             +EGS + FSMS  D+LN+  PG  + +   K    R L  LPL ER RTWLLEGPP+HR
Sbjct: 285  MEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEGPPIHR 343

Query: 638  FEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLLLFSKN 459
            F+ALKHLAPD S +E++ VLQ +A++VQGLWVPKS LVYGT+ G+ VLAR++VL  F+K 
Sbjct: 344  FDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKG 403

Query: 458  AIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSVVKKQEEEW 279
             +I KS    RP    A    L  LAVER    DWKL+E PD  F      VV++++  W
Sbjct: 404  ILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQATW 463

Query: 278  ECLEKRINDHVCGGRNRPGMRSSNTTN---------NPAT*KSSSKLAMAEEVREAITKA 126
            ECL K+IND + GGRNRP M++    N         +  T  S  + +M+EE+REA+ KA
Sbjct: 464  ECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEEIREALPKA 523

Query: 125  LQKFLKVSRFCR 90
            LQ+  +  + CR
Sbjct: 524  LQEVFRTYKVCR 535


>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|557527706|gb|ESR38956.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 637

 Score =  428 bits (1101), Expect = e-139
 Identities = 247/576 (42%), Positives = 338/576 (58%), Gaps = 29/576 (5%)
 Frame = -1

Query: 1706 MDLDELLD----GPSKGPNRPARFAPKGSKFKPRP-----KAEPSQSLPPSASDSMESLP 1554
            MDLD+  D     PS+ P+R +RF PK SK  P+P     KAEP Q   P   D+ +   
Sbjct: 1    MDLDDFDDLDKATPSQVPSRVSRFLPKSSKLVPKPEPPPEKAEPQQPKKPKTEDNFQQTT 60

Query: 1553 ----IPKKEELGIKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXX 1386
                 PK E      D+K       +E                +                
Sbjct: 61   SVNLTPKTEPSVSNGDVK-------LESKPVPEPETEPRKEEPVDLNMDELHLQDDEDMI 113

Query: 1385 XXEIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDS 1206
              EIDV+FTP +D  ++LYV+QYPLRPLWRPYELDE CEEVRVKP+++EVE+DL++DVDS
Sbjct: 114  VREIDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDS 173

Query: 1205 KNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLES 1026
             N+DS    R+ M KQ L+  W PP  +G+A+GVL GNKL+LNPIH VVQLR S+  L+S
Sbjct: 174  NNWDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKS 233

Query: 1025 RESKRKTVGSSNVNDTVK-SEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSD 849
              SKRK   +S +   ++ S + +               EQ  + EE WVPLKYH + SD
Sbjct: 234  GGSKRKNNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSKSD 293

Query: 848  LTARYLQKMKAQEGSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRT 669
             +ARYLQ+M  +E S I F+M+ YD+++SLCPGA S +  SKGP  RFLL++PL ERF+ 
Sbjct: 294  FSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERFKK 353

Query: 668  WLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLAR 489
             L EG PV RF  L H AP+++VE+V+GVL  +  +VQGLW P+SPL++  D+ +  LAR
Sbjct: 354  LLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDK-MKCLAR 412

Query: 488  DYVLLLFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNP 309
            DYVLL FSKN+++    L   P L + +   LN+ AVER  FKDWK R+  DLSF+K +P
Sbjct: 413  DYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKEHP 472

Query: 308  SVVKKQEEEWECLEKRINDHV-----CGG--RNRPG--------MRSSNTTNNPAT*KSS 174
            ++V KQE+ W   EK+I D +      G   RN  G        +++ N++N P+   + 
Sbjct: 473  NIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLKAINSSNGPSGALTG 532

Query: 173  SKLAMAEEVREAITKALQKFLKVSRFCR*DTFKRSL 66
            +K  ++ E REA+ KALQK  ++ + C     K+ L
Sbjct: 533  NK-NLSNESREALPKALQKLFQIHKVCSLPLIKQGL 567


>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 666

 Score =  429 bits (1103), Expect = e-139
 Identities = 263/580 (45%), Positives = 343/580 (59%), Gaps = 23/580 (3%)
 Frame = -1

Query: 1706 MDLDELLDGPSKGP--NRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEEL 1533
            MDLD   DGPSK P  +R ARFAPK SK KP+PK EP     P    ++ S    KKEE+
Sbjct: 1    MDLD--FDGPSKPPPSSRAARFAPKNSKLKPQPKPEPEPEPEPLTDPTIPS----KKEEI 54

Query: 1532 GIKSDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXEIDVYFTPF 1353
              K  +  E  + A  +                +                  ID+YFTP 
Sbjct: 55   DSKPLLTLENGSSAPSIDTEKADVEVQQDVAMEIVESGEDEVVRE-------IDMYFTPS 107

Query: 1352 VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRV 1173
            +DP T+LYVLQ P+RP+WRPYEL+E C+EVR++PT+A++E+DLA+D DSKN+D  +    
Sbjct: 108  LDPNTQLYVLQSPMRPVWRPYELEERCKEVRLRPTTAQMEVDLAIDFDSKNFDRDSIYAE 167

Query: 1172 QMKKQILTALW--KPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVG 999
            +M+KQ ++  W   P   SG+AVGVL G+KL+LNPIHTVVQLRPS QHL+  E K K + 
Sbjct: 168  KMEKQTVSTSWIPVPTGTSGYAVGVLIGDKLHLNPIHTVVQLRPSKQHLKESELK-KNIA 226

Query: 998  SSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMK 819
            +SN   TV++EE +E           K P   KD EE WV LKYH   S+++ARYLQ+M 
Sbjct: 227  TSNDEKTVENEEIKENKPVAPSKKQNKPPGNDKDIEEHWVHLKYHGARSEISARYLQRMA 286

Query: 818  AQEGSQISFSMS----------SYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRT 669
             +EGS I FSMS            D+L +LCPG  + +   K   IR +  LPL ERFRT
Sbjct: 287  MEEGSPIPFSMSLAFFSVNLIHRVDYLRTLCPGRPNDTDKYKDLRIR-VSQLPLDERFRT 345

Query: 668  WLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLAR 489
            WL EGPP+HRF ALKHLA D  VEE+L VLQ +A+VVQGLWVPKS LVYG + G  VLAR
Sbjct: 346  WLHEGPPIHRFGALKHLALDNPVEEILEVLQRYAQVVQGLWVPKSSLVYGRNDGHEVLAR 405

Query: 488  DYVLLLFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNP 309
            D+VL  FSK+  I +S    +P    A    L +LAVER    DWKL+E PD  F     
Sbjct: 406  DFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPDLNDWKLKEHPDKEFENLYG 465

Query: 308  SVVKKQEEEWECLEKRINDHVCGGRNRPGMR--SSNTTNNPA-------T*KSSSKLAMA 156
             +VK+Q+  WE L K+I   + GGRNRP M+  S+ +   PA       T +S ++ +M+
Sbjct: 466  DLVKEQQVTWERLGKQIYGLLAGGRNRPTMKNPSNPSAGIPALPSGGKPTPRSVTRTSMS 525

Query: 155  EEVREAITKALQKFLKVSRFCR*DTFKRSLDFQILIRIRD 36
            E  REA+ KALQK  +  + C   +F+     QI +R+R+
Sbjct: 526  ERTREALQKALQKVFRTHKVC---SFQ-----QIRLRLRE 557


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum tuberosum]
          Length = 669

 Score =  428 bits (1101), Expect = e-138
 Identities = 249/560 (44%), Positives = 337/560 (60%), Gaps = 13/560 (2%)
 Frame = -1

Query: 1706 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPS-QSLPPSASDSMESLPIPKKEELG 1530
            MDLD   DGPSK P R +RFAPK SK KP+P+ +P  ++LP S     +S  + KKEEL 
Sbjct: 1    MDLD--FDGPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPHS-----DSAILTKKEELS 53

Query: 1529 IK-SDIKPEYVNDAIEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXEIDVYFTPF 1353
            +  ++      ND + +                +                 EIDV   P 
Sbjct: 54   VSLAENGAVTGNDDVPLEGETTGNY--------LGEDEGQVTDSDHDEVVREIDVCINPS 105

Query: 1352 VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRV 1173
             DP T+LYV QYPLR +WRPYEL+E C+EVR++P++AE+E+DLA+D+DSKN+D  +    
Sbjct: 106  FDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAA 165

Query: 1172 QMKKQILTALWKP--PHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVG 999
             +KKQ+L+  W P     SG+AVGVL G+KL+LNP+H VVQLRPS ++L+  E K K V 
Sbjct: 166  TIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-KNVT 224

Query: 998  SSNVNDTVKSEEPQEXXXXXXXXXXXKIPEQTKDSEEDWVPLKYHSTGSDLTARYLQKMK 819
            ++N   +V++E+ +E           K P   KD  E W+ LKYH   SD++ARYLQKM 
Sbjct: 225  TNNDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQKMA 284

Query: 818  AQEGSQISFSMSSYDHLNSLCPGAYSGSFSSKGPPIRFLLTLPLRERFRTWLLEGPPVHR 639
             +EGS + FSMS  D+LN+  PG  + +   K    R L  LPL ER RTWLLEGPP+HR
Sbjct: 285  MEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEGPPIHR 343

Query: 638  FEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLLLFSKN 459
            F+ALKHLAPD S +E++ VLQ +A++VQGLWVPKS LVYGT+ G+ VLAR++VL  F+K 
Sbjct: 344  FDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKG 403

Query: 458  AIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSFVKSNPSVVKKQEEEW 279
             +I KS    RP    A    L  LAVER    DWKL+E PD  F      VV++++  W
Sbjct: 404  ILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQATW 463

Query: 278  ECLEKRINDHVCGGRNRPGMRSSNTTN---------NPAT*KSSSKLAMAEEVREAITKA 126
            ECL K+IND + GGRNRP M++    N         +  T  S  + +M+EE+REA+ KA
Sbjct: 464  ECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEEIREALPKA 523

Query: 125  LQKFLKVSRFCR*DTFKRSL 66
            LQ+  +  + C     ++ L
Sbjct: 524  LQEVFRTYKVCSFQQIRQGL 543