BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00031649
         (950 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo...   155   1e-68
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   152   2e-68
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...   158   7e-66
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo...   152   8e-65
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   150   1e-64
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   155   4e-64
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   155   4e-64
gb|KYP63768.1| Retrovirus-related Pol polyprotein from transposo...   149   9e-64
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   151   2e-63
gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposo...   153   2e-63
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo...   154   3e-63
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   145   1e-62
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   145   3e-62
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...   144   3e-62
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     158   3e-62
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   152   4e-62
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho...   147   4e-62
gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposo...   153   4e-62
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...   135   8e-62
gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposo...   143   8e-62

>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1403

 Score =  155 bits (392), Expect(2) = 1e-68
 Identities = 78/159 (49%), Positives = 107/159 (67%), Gaps = 3/159 (1%)
 Frame = -3

Query: 567  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 388
            QQNGT ERKHRHI EVGL+L+++SG+P  +W D F  +I++INR+P   +G KS +EVL+
Sbjct: 636  QQNGTAERKHRHITEVGLTLLSSSGLPHIFWSDAFSTAIHVINRLPTPILGHKSPYEVLF 695

Query: 387  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 208
             + P Y  LR FGC C+PH R +N  K++ RS   VF+GYS Q KGYK     GKII SR
Sbjct: 696  NKIPDYLLLRPFGCACYPHLRPFNSHKMDFRSSQCVFIGYSMQHKGYKCFTTNGKIIISR 755

Query: 207  DVVFNEEIFP---FLKTKNSSIVLSQQNVQHLTPSIPIV 100
            +VVF+E+ FP   +  T N + + S  + Q + PSI ++
Sbjct: 756  NVVFDEDTFPGPSYFNTNNVAGLSSSHSPQPV-PSIHVL 793



 Score =  133 bits (335), Expect(2) = 1e-68
 Identities = 64/133 (48%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
 Frame = -1

Query: 950 INKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID 771
           IN      C  C + KSH LPF  S      PL+L+++D+WGPS   S  G  YYV F D
Sbjct: 507 INHQDSIVCKSCCIGKSHTLPFSDSYTVYNSPLELVYSDVWGPSHYASREGFRYYVHFTD 566

Query: 770 -FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGII 594
            F+K+ WIYF+  +S+T + F+HFKS+VENQ   +IKM QSDGG E   LTK F+E GI 
Sbjct: 567 AFSKYTWIYFMHNKSETAHHFIHFKSMVENQFGHKIKMFQSDGGKEFTCLTKLFNENGIT 626

Query: 593 HQISCPYTPNKMG 555
           H++SCP++  + G
Sbjct: 627 HRLSCPHSHQQNG 639


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  152 bits (383), Expect(2) = 2e-68
 Identities = 70/136 (51%), Positives = 95/136 (69%)
 Frame = -3

Query: 567  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 388
            +QNG  ERKHRHI+E G++L+A + +P +YWD+ F  S+YLINR+P   +  KS  EVL+
Sbjct: 660  EQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLF 719

Query: 387  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 208
             Q PSYS L++FGC C+P+ R +N  KL+ RS    FLGYS   KGYK L P G I+ SR
Sbjct: 720  HQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGYKCLSPNGNILISR 779

Query: 207  DVVFNEEIFPFLKTKN 160
            DV+F+E  FPF + ++
Sbjct: 780  DVIFDEXAFPFAQLQS 795



 Score =  136 bits (342), Expect(2) = 2e-68
 Identities = 68/134 (50%), Positives = 87/134 (64%), Gaps = 1/134 (0%)
 Frame = -1

Query: 950 INKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID 771
           +NK     CS C + K HK  F  S    T+PL+LIHTDLWGP+   SS+G  YY+ FID
Sbjct: 531 LNKIPSLICSXCCMGKIHKSSFLHSTSSYTKPLELIHTDLWGPASTPSSHGHQYYIHFID 590

Query: 770 -FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGII 594
            +++F WIY L+ +S+ F VFLHFKS VE Q   +IK VQSD G E +  T+  +  GII
Sbjct: 591 AYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQYLTSNGII 650

Query: 593 HQISCPYTPNKMGL 552
           H+ISCPYT  + GL
Sbjct: 651 HRISCPYTHEQNGL 664


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 785

 Score =  158 bits (400), Expect(2) = 7e-66
 Identities = 78/157 (49%), Positives = 102/157 (64%)
 Frame = -3

Query: 564  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 385
            QNG +ERKHRHI+E+GL+++A + +P ++WD  F  S+YLINR+P+ +I     F  L+ 
Sbjct: 559  QNGVVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQNDVPFRKLFH 618

Query: 384  QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 205
            Q P Y+ LRIFGC CFPH R YN +KL+ RSQ  VFLGYS   KGYK L P G+I  S+D
Sbjct: 619  QLPDYNFLRIFGCSCFPHLRPYNKNKLQFRSQECVFLGYSTSHKGYKCLAPTGRIFISKD 678

Query: 204  VVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVLI 94
            VVF E  FP+        +        LTPSIP+ L+
Sbjct: 679  VVFCETRFPY------PSLFPAPATNPLTPSIPVPLV 709



 Score =  121 bits (303), Expect(2) = 7e-66
 Identities = 55/134 (41%), Positives = 85/134 (63%), Gaps = 1/134 (0%)
 Frame = -1

Query: 950 INKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID 771
           INK    FC+ C + KSHKLP + S      P +LI++DLWGP+P+ S NG  YYV F+D
Sbjct: 429 INKTASDFCTPCCLGKSHKLPSNSSKTVYHTPFELIYSDLWGPAPITSDNGYQYYVTFVD 488

Query: 770 -FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGII 594
             T+F WI+ L+ ++ T +VF  F ++++NQ    IK +Q+D G E +  T   ++ GI 
Sbjct: 489 AHTRFTWIFLLKRKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWGGEFRSFTSYLAQNGIQ 548

Query: 593 HQISCPYTPNKMGL 552
           H++ CP+T ++ G+
Sbjct: 549 HRLICPHTHHQNGV 562


>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  152 bits (383), Expect(2) = 8e-65
 Identities = 65/130 (50%), Positives = 96/130 (73%)
 Frame = -3

Query: 564  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 385
            QNGT+ER+HRHI+E+GL+++ +S +P  +WD  F  + YLINR+P+ ++GF+S +++++ 
Sbjct: 657  QNGTVERRHRHIVELGLAMLHHSTLPLNFWDHAFLTATYLINRLPSSSVGFQSPYKLIHH 716

Query: 384  QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 205
            + P Y+ L++FGC CFP  R YN  KL+PRS+  VFLGYS   KGYK L   G+I  S+D
Sbjct: 717  KDPDYTFLKVFGCSCFPLLRPYNQHKLQPRSEECVFLGYSPLHKGYKCLSKSGRIYISKD 776

Query: 204  VVFNEEIFPF 175
            V+FNE  FP+
Sbjct: 777  VIFNEGRFPY 786



 Score =  124 bits (311), Expect(2) = 8e-65
 Identities = 56/126 (44%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
 Frame = -1

Query: 929 FCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFIDF-TKFIW 753
           FC  C ++KSH+LP H S    ++PL+L+  D+WGP+ L+SS G  Y++  +D  TK++W
Sbjct: 534 FCDSCCIAKSHRLPSHPSTTIYSKPLELVFLDVWGPASLESSCGYLYFLTCVDACTKYVW 593

Query: 752 IYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPY 573
           IY LR +SD F+ F +FK+L E Q    +K VQ+DGG E + L   F + GI+H+++CPY
Sbjct: 594 IYLLRRKSDVFSNFQNFKALAEKQFQLPLKSVQTDGGGEFRALISFFQQEGILHRLTCPY 653

Query: 572 TPNKMG 555
           T ++ G
Sbjct: 654 THHQNG 659


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1268

 Score =  150 bits (379), Expect(2) = 1e-64
 Identities = 67/131 (51%), Positives = 89/131 (67%)
 Frame = -3

Query: 564 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 385
           QNG +ERKHRHI+++G++L+ ++ +P  +WD  F  ++YLINR+P  ++ F   F VL+ 
Sbjct: 574 QNGVVERKHRHIVDIGITLLHHASLPLTFWDYAFSTAVYLINRLPTASLNFDIPFTVLFK 633

Query: 384 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 205
           Q P Y  L+ FGC CFP  R Y   KL+ RSQ  VFLGYSN  KGYK L   GKI  S+D
Sbjct: 634 QTPDYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYISKD 693

Query: 204 VVFNEEIFPFL 172
           V+FNE  FP+L
Sbjct: 694 VIFNETRFPYL 704



 Score =  125 bits (313), Expect(2) = 1e-64
 Identities = 64/133 (48%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
 Frame = -1

Query: 947 NKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID- 771
           N++   FCS C V KSH+LP   S    + PL LI TDLWGPS + S +G  YYV FID 
Sbjct: 445 NRNVSEFCSSCCVGKSHRLPSLVSESVYSAPLDLIFTDLWGPSHVVSHSGYVYYVSFIDA 504

Query: 770 FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIH 591
           F+KF WIY L+++SDT +VF  FK++VE Q N +IK +QSD G E +  T   +  GI H
Sbjct: 505 FSKFTWIYPLKSKSDTLSVFQQFKAMVELQLNTKIKSIQSDWGGEYRSFTAFLATHGITH 564

Query: 590 QISCPYTPNKMGL 552
           ++ CP+T ++ G+
Sbjct: 565 RLICPHTHHQNGV 577


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  155 bits (392), Expect(2) = 4e-64
 Identities = 77/156 (49%), Positives = 100/156 (64%)
 Frame = -3

Query: 564  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 385
            QNG  ERKHRHI+E+GL+LMA + +P ++WD  F  ++YLINR+P+ +I     +  L+ 
Sbjct: 655  QNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFH 714

Query: 384  QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 205
            QPP Y  LRIFGC CFPH R YN  KL+ RSQ  VFLGYS   KGYK L   G++  S+D
Sbjct: 715  QPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKD 774

Query: 204  VVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVL 97
            VVFNE  FP+    +SS     Q    L  S+P+ +
Sbjct: 775  VVFNETKFPYKDLFSSSKASDSQ----LPISVPLTI 806



 Score =  118 bits (296), Expect(2) = 4e-64
 Identities = 54/127 (42%), Positives = 84/127 (66%), Gaps = 1/127 (0%)
 Frame = -1

Query: 929 FCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIW 753
           FC+ C + KSH+LP + S      P  L+++DLWGP+P+ S+ G  YYV F+D  T+F W
Sbjct: 532 FCTPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTW 591

Query: 752 IYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPY 573
           IY L++++ TFNVF  F ++V+NQ +  IK +Q+D G E +  T   +E GI H++ CP+
Sbjct: 592 IYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNEVGIQHRLICPH 651

Query: 572 TPNKMGL 552
           T ++ G+
Sbjct: 652 THHQNGV 658


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1073

 Score =  155 bits (392), Expect(2) = 4e-64
 Identities = 77/156 (49%), Positives = 100/156 (64%)
 Frame = -3

Query: 564 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 385
           QNG  ERKHRHI+E+GL+LMA + +P ++WD  F  ++YLINR+P+ +I     +  L+ 
Sbjct: 320 QNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFH 379

Query: 384 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 205
           QPP Y  LRIFGC CFPH R YN  KL+ RSQ  VFLGYS   KGYK L   G++  S+D
Sbjct: 380 QPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKD 439

Query: 204 VVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVL 97
           VVFNE  FP+    +SS     Q    L  S+P+ +
Sbjct: 440 VVFNETKFPYKDLFSSSKASDSQ----LPISVPLTI 471



 Score =  118 bits (296), Expect(2) = 4e-64
 Identities = 54/127 (42%), Positives = 84/127 (66%), Gaps = 1/127 (0%)
 Frame = -1

Query: 929 FCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIW 753
           FC+ C + KSH+LP + S      P  L+++DLWGP+P+ S+ G  YYV F+D  T+F W
Sbjct: 197 FCTPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTW 256

Query: 752 IYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPY 573
           IY L++++ TFNVF  F ++V+NQ +  IK +Q+D G E +  T   +E GI H++ CP+
Sbjct: 257 IYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNEVGIQHRLICPH 316

Query: 572 TPNKMGL 552
           T ++ G+
Sbjct: 317 THHQNGV 323


>gb|KYP63768.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 678

 Score =  149 bits (375), Expect(2) = 9e-64
 Identities = 72/170 (42%), Positives = 109/170 (64%), Gaps = 16/170 (9%)
 Frame = -3

Query: 567 QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 388
           +QNGT+ERKHRHI+EVGLS++AN+ +P ++W + F   +++IN++P   + + +  E  +
Sbjct: 477 EQNGTIERKHRHIVEVGLSMLANASMPLKFWGEAFSFVVHIINQLPTPTLSYSALMETFF 536

Query: 387 --AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIY 214
              + P Y HLRIFGC C+P+ R YN +KLE RSQ  VFLGY++ +KGY  L   GK+  
Sbjct: 537 FSKKNPDYHHLRIFGCACYPNMRPYNKNKLEFRSQECVFLGYTSNYKGYLCLSKTGKVFI 596

Query: 213 SRDVVFNEEIFP------FLKTKNSSIVLSQQN--------VQHLTPSIP 106
           SR V+F+E++FP      FL+  +S+  +S           +Q  TP+IP
Sbjct: 597 SRHVIFDEDLFPFAVNPKFLEENDSAAAVSTPTPLPCIPIYIQPNTPTIP 646



 Score =  124 bits (310), Expect(2) = 9e-64
 Identities = 53/125 (42%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
 Frame = -1

Query: 926 CSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWI 750
           C  C   KSH +PF+ S     +PLQL+ +D+WGP P+ SSNGS YY+ F+D ++K+ WI
Sbjct: 356 CKSCCYGKSHNMPFYSSKTAYNKPLQLVFSDIWGPVPVPSSNGSRYYIHFLDAYSKYTWI 415

Query: 749 YFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYT 570
           Y ++ +S     F+HFK +++NQ + +IK +Q+DGG +    +   +E GIIH++SC YT
Sbjct: 416 YLIQFKSQALAYFMHFKKMIDNQLDMKIKCLQTDGGKKYTIFSSFLNEHGIIHRLSCLYT 475

Query: 569 PNKMG 555
             + G
Sbjct: 476 HEQNG 480


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 839

 Score =  151 bits (381), Expect(2) = 2e-63
 Identities = 68/130 (52%), Positives = 90/130 (69%)
 Frame = -3

Query: 564 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 385
           QNG +ERKHRHI+E+GL+L+A + +P  +WD  F  S+YLINR+P+ +I     F  L+ 
Sbjct: 306 QNGVVERKHRHIVELGLTLLAQAHLPMHFWDYAFLTSVYLINRLPSSSIQQDVPFRKLFH 365

Query: 384 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 205
             P Y+ LR+FGC CFPH R YN +KL+ RSQ  VFLGYS   KGYK L P G++  S+D
Sbjct: 366 HLPDYNFLRVFGCSCFPHLRPYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRVFISKD 425

Query: 204 VVFNEEIFPF 175
           V+F E  FP+
Sbjct: 426 VIFCENRFPY 435



 Score =  120 bits (301), Expect(2) = 2e-63
 Identities = 59/136 (43%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
 Frame = -1

Query: 950 INKDGVPFCSDCVVSKSHKLP--FHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVF 777
           INK    FC+ C + KSHKLP    K+V+ T  P +LI++DLWGP+P+ S NG  YYV F
Sbjct: 176 INKSVSDFCTSCCLGKSHKLPSQLSKTVYHT--PFELIYSDLWGPAPVLSDNGYQYYVTF 233

Query: 776 ID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECG 600
           +D  T+F WI+ L++++ T +VF  F ++V NQ    IK +Q+D G E +  T   ++ G
Sbjct: 234 VDAHTRFTWIFMLKSKAHTLDVFKQFHAMVRNQFQLPIKAIQTDWGGEFRSFTSYLAQHG 293

Query: 599 IIHQISCPYTPNKMGL 552
           I H+I CP+T ++ G+
Sbjct: 294 IHHRIICPHTHHQNGV 309


>gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 488

 Score =  153 bits (386), Expect(2) = 2e-63
 Identities = 69/142 (48%), Positives = 101/142 (71%), Gaps = 4/142 (2%)
 Frame = -3

Query: 564 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 385
           QNGT+ER+HRHI+E+GL+++ +S +P  +WD  F  + YLINR+P+ ++GF+S +++++ 
Sbjct: 155 QNGTVERRHRHIVELGLAMLHHSALPLNFWDHAFLTATYLINRLPSSSVGFQSPYKLIHN 214

Query: 384 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 205
           + P Y+ L+IFGC CFP  R YN  K++PRS+  VFLGYS   KGYK L   G+I  S+D
Sbjct: 215 KDPDYAFLKIFGCSCFPLLRPYNQHKIQPRSEECVFLGYSPSHKGYKCLSRSGRIYISKD 274

Query: 204 VVFNEEIFP----FLKTKNSSI 151
           V+FNE  FP    F+ T  +SI
Sbjct: 275 VIFNEGRFPYNDLFVTTTQASI 296



 Score =  118 bits (296), Expect(2) = 2e-63
 Identities = 54/126 (42%), Positives = 83/126 (65%), Gaps = 1/126 (0%)
 Frame = -1

Query: 929 FCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFIDF-TKFIW 753
           FC  C ++KSH+LP   S    ++PL+L+  D+WGP+ L+SS G  Y++  +D  TK++W
Sbjct: 32  FCDSCCIAKSHRLPSQPSTTIYSKPLELVFLDVWGPASLESSCGYLYFLTCVDACTKYVW 91

Query: 752 IYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPY 573
           IY LR +SD  + F +FK+L E Q    +K VQ+DGG E + L   F + GI+H+++CPY
Sbjct: 92  IYLLRRKSDVSSNFQNFKALAEKQFQTPLKFVQTDGGGEFRTLIPFFQQEGILHRLTCPY 151

Query: 572 TPNKMG 555
           T ++ G
Sbjct: 152 THHQNG 157


>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 537

 Score =  154 bits (389), Expect(2) = 3e-63
 Identities = 78/157 (49%), Positives = 102/157 (64%)
 Frame = -3

Query: 564 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 385
           QNG +ERKHRHI+E+GL+++A + +P ++WD  F  S+YLINR+P+ +I     F  L+ 
Sbjct: 195 QNGIVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQHDVPFRKLFH 254

Query: 384 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 205
           Q P Y+ LRIFGC CFPH R YN +KL+ RSQ  VFLGYS   KGYK L P G+I  S+D
Sbjct: 255 QLPDYNFLRIFGCSCFPHLRPYNKNKLQLRSQECVFLGYSTSHKGYKCLAPTGRIFISKD 314

Query: 204 VVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVLI 94
           V+F E  FP+     S    S  N    T SIP+ L+
Sbjct: 315 VIFCETRFPY----PSLFPASATNPP--TSSIPVPLV 345



 Score =  117 bits (292), Expect(2) = 3e-63
 Identities = 56/136 (41%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
 Frame = -1

Query: 950 INKDGVPFCSDCVVSKSHKLP--FHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVF 777
           INK    FC+ C + KSHKLP    K+V+ T  P +LI++DLW P+P+ S NG  YYV F
Sbjct: 65  INKTVSDFCTPCRLGKSHKLPSTLSKTVYHT--PFELIYSDLWRPAPITSDNGYQYYVTF 122

Query: 776 ID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECG 600
           +D  T+FIWI+  ++++ T +VF  F ++++NQ    IK +Q+D G E +  T   ++ G
Sbjct: 123 VDAHTRFIWIFLFKSKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWGGEFRSFTSYLAQNG 182

Query: 599 IIHQISCPYTPNKMGL 552
           I H++ CP+T ++ G+
Sbjct: 183 IQHRLICPHTHHQNGI 198


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  145 bits (366), Expect(2) = 1e-62
 Identities = 69/158 (43%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
 Frame = -3

Query: 564  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIG-FKSHFEVLY 388
            QNGT+ERKHRHI+E+GL+L++++ +P ++WD  F  ++YLINR+P+  I  F+S +  L+
Sbjct: 653  QNGTVERKHRHIVEMGLTLLSHAALPLKFWDHSFTQAVYLINRLPSSAIPLFQSPYHALH 712

Query: 387  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 208
               P YS +++FGC CFPH R YN  KL+ RS   V+LG S Q KG+K L   G+I  S+
Sbjct: 713  QSQPDYSQIKVFGCLCFPHLRPYNNHKLQYRSSPCVYLGVSPQHKGHKCLDATGRIYISK 772

Query: 207  DVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVLI 94
            DV+F+E  FP+L     S+  S  +  H++ + P  ++
Sbjct: 773  DVIFHESQFPYL-----SLFASSSSNSHMSHTYPAQIL 805



 Score =  124 bits (310), Expect(2) = 1e-62
 Identities = 58/132 (43%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
 Frame = -1

Query: 947 NKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID- 771
           NK     C+ C + KSH+L    S    T+P ++IH DLWGP+P  S  G +YY+ F+D 
Sbjct: 524 NKTATLPCTFCCMGKSHRLHSPLSNTVYTKPFEVIHCDLWGPAPFVSYYGYSYYITFVDT 583

Query: 770 FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIH 591
           +TKF WIYFL+A+SD    F  FK+L++NQ    IK +QSD G E +  T   +E GI H
Sbjct: 584 YTKFTWIYFLKAKSDALKAFTQFKALIQNQFQASIKAIQSDWGGEFRAFTALLNELGIQH 643

Query: 590 QISCPYTPNKMG 555
           +++CP+T ++ G
Sbjct: 644 RLTCPHTSHQNG 655


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  145 bits (367), Expect(2) = 3e-62
 Identities = 72/155 (46%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
 Frame = -3

Query: 567  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 388
            QQNG  ERKHR I+E GL+L+  + +P ++WD+ F   +YL NR+P   +  K   EVL+
Sbjct: 677  QQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLF 736

Query: 387  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 208
               P YS L++FGC CFP+ R YN  KL+ RS+   FLGYS + KGYK +   G++  S 
Sbjct: 737  KSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISH 796

Query: 207  DVVFNEEIFPFLKT-KNSSIVLS--QQNVQHLTPS 112
            DV+FNE  FP+ KT + SS +LS    +  HL+PS
Sbjct: 797  DVIFNETSFPYSKTIQVSSCLLSTVSPSTSHLSPS 831



 Score =  122 bits (305), Expect(2) = 3e-62
 Identities = 57/134 (42%), Positives = 87/134 (64%), Gaps = 1/134 (0%)
 Frame = -1

Query: 950 INKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID 771
           INK    FCS C + K H+ PF  S    T+PL+LIH DLWGP+ + S++G  YY+ F+D
Sbjct: 548 INKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVD 607

Query: 770 -FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGII 594
            F++F WI+ LR +S+    F++FK+ VE Q + +IK +Q+D G E +      +E GI+
Sbjct: 608 AFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLAENGIV 667

Query: 593 HQISCPYTPNKMGL 552
           H++SCP+T  + G+
Sbjct: 668 HRVSCPHTQQQNGV 681


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  144 bits (362), Expect(2) = 3e-62
 Identities = 68/158 (43%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
 Frame = -3

Query: 564  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIG-FKSHFEVLY 388
            QNGT+ERKHRHI+E+GL+L++++ +P ++WD  F  ++YLINR+P+  I  F+S +  L+
Sbjct: 653  QNGTVERKHRHIVEMGLTLLSHADLPLKFWDHSFTQAVYLINRLPSSAIPLFQSPYHALH 712

Query: 387  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 208
               P YS +++FGC CFPH R YN  KL+ +S   V+LG S Q KG+K L   G+I  S+
Sbjct: 713  QSQPDYSQIKVFGCLCFPHLRPYNNHKLQYKSSPCVYLGVSPQHKGHKCLDATGRIYISK 772

Query: 207  DVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVLI 94
            DV+F+E  FP+L     S+  S  +  H++ + P  ++
Sbjct: 773  DVIFHESQFPYL-----SLFASSSSNSHMSHTYPAQIL 805



 Score =  124 bits (310), Expect(2) = 3e-62
 Identities = 58/132 (43%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
 Frame = -1

Query: 947 NKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID- 771
           NK     C+ C + KSH+L    S    T+P ++IH DLWGP+P  S  G +YY+ F+D 
Sbjct: 524 NKTATLPCTFCCMGKSHRLHSPLSNTVYTKPFEVIHCDLWGPAPFVSYYGYSYYITFVDT 583

Query: 770 FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIH 591
           +TKF WIYFL+A+SD    F  FK+L++NQ    IK +QSD G E +  T   +E GI H
Sbjct: 584 YTKFTWIYFLKAKSDALKAFTQFKALIQNQFQASIKAIQSDWGGEFRAFTALLNELGIQH 643

Query: 590 QISCPYTPNKMG 555
           +++CP+T ++ G
Sbjct: 644 RLTCPHTSHQNG 655


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  158 bits (399), Expect(2) = 3e-62
 Identities = 75/154 (48%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
 Frame = -3

Query: 567  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 388
            QQNG+ ERKHRHI+EVGLSL+A++ +P ++WD+ F A+ YLINR P+K I +++  E L+
Sbjct: 602  QQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFIAATYLINRTPSKVIQYETPLEHLF 661

Query: 387  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYS 211
             Q PSY+ LR+FGC C+P+ R YN  KL+ RS+  VFLGYSN  KG+K L +  G++  S
Sbjct: 662  HQKPSYTSLRVFGCACWPNLRPYNARKLQFRSKQCVFLGYSNLHKGFKCLDVAAGRVYIS 721

Query: 210  RDVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSI 109
            RDVVF+E +FPF    +++    +  +  L P++
Sbjct: 722  RDVVFDENVFPFASLHSNAGARLRSEILLLPPTL 755



 Score =  109 bits (273), Expect(2) = 3e-62
 Identities = 55/125 (44%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
 Frame = -1

Query: 926 CSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWI 750
           C  C   KSH+LPF KS   +  PL+L+ +D+WGP+P  S  G  YYV FID F+KF WI
Sbjct: 482 CDACQKGKSHQLPFLKSTSASNFPLELVFSDVWGPAP-DSVGGRKYYVSFIDDFSKFTWI 540

Query: 749 YFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYT 570
           Y L+ +S+ F+ F  F+ LVE    ++I  +Q+D G E + L   F++ GI H +SCP+T
Sbjct: 541 YLLKQKSEVFHKFHEFQQLVERIFYRKIIAMQTDWGGEYEKLHDFFTKIGISHHVSCPHT 600

Query: 569 PNKMG 555
             + G
Sbjct: 601 HQQNG 605


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  152 bits (385), Expect(2) = 4e-62
 Identities = 73/154 (47%), Positives = 105/154 (68%), Gaps = 1/154 (0%)
 Frame = -3

Query: 567  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 388
            QQNG +ERKHRHI+EVGLSL+A++ +P ++WD+ F A+ YLINR+P+K I F +  E L+
Sbjct: 598  QQNGAVERKHRHIVEVGLSLLAHASMPLKFWDEAFLAATYLINRLPSKVIKFDTPLERLF 657

Query: 387  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYS 211
             Q P Y  LR FGC C+P+ R YN  KL+ RS+  VFLG+SN  KG+K L +  G++  S
Sbjct: 658  KQTPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSNIHKGFKCLDVSTGRVYVS 717

Query: 210  RDVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSI 109
            RDV F+E++FPF     ++    +  +  L P++
Sbjct: 718  RDVTFDEQVFPFANLHPNAGARLRAEISLLPPTL 751



 Score =  114 bits (286), Expect(2) = 4e-62
 Identities = 55/125 (44%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
 Frame = -1

Query: 926 CSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWI 750
           C  C  +K H+LPF +S   +  PL+LIH+D+WGP+  +S     YYV FID ++KF+WI
Sbjct: 478 CDACQQAKCHQLPFPRSTSVSNNPLELIHSDVWGPAS-ESVGAKKYYVSFIDDYSKFVWI 536

Query: 749 YFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYT 570
           YFL+ +S+ F  F  F+ LVE Q +++I  +Q+D G E   L   F+E GI H +SCP+T
Sbjct: 537 YFLKHKSEVFQKFHEFQKLVERQFDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHT 596

Query: 569 PNKMG 555
             + G
Sbjct: 597 HQQNG 601


>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
            gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
            protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  147 bits (372), Expect(2) = 4e-62
 Identities = 70/134 (52%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
 Frame = -3

Query: 567  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 388
            QQNG +ERKHRHI+E+GLSL+A++ +P ++WD+ F A+ YLINR+P K I F +    L+
Sbjct: 599  QQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATYLINRLPRKVIDFDTPLARLF 658

Query: 387  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVL-LPGGKIIYS 211
             Q P Y  LR FGC C+P+ R YN  KL+ RS+  VFLG+SN  KG+K L +  G++  S
Sbjct: 659  HQQPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSNLHKGFKCLEVATGQVYIS 718

Query: 210  RDVVFNEEIFPFLK 169
            RDV F+E+ FPF K
Sbjct: 719  RDVTFDEQEFPFSK 732



 Score =  119 bits (299), Expect(2) = 4e-62
 Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 1/125 (0%)
 Frame = -1

Query: 926 CSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIWI 750
           C  C   KSH+LPF K    ++ PL+LIH+D+WGP+   S     YYV FID ++KF+WI
Sbjct: 479 CDACQQGKSHQLPFPKFFSVSSNPLELIHSDVWGPAS-DSVGAKRYYVSFIDDYSKFVWI 537

Query: 749 YFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPYT 570
           YFL+ +S+ F  F  F+S+VE Q N++I  +Q+D G E + L   F + GI HQ+SCP+T
Sbjct: 538 YFLKFKSEVFEKFKEFQSMVERQFNRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHT 597

Query: 569 PNKMG 555
             + G
Sbjct: 598 HQQNG 602


>gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1085

 Score =  153 bits (387), Expect(2) = 4e-62
 Identities = 75/156 (48%), Positives = 100/156 (64%)
 Frame = -3

Query: 564 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 385
           QNG +ERKHRHI+E+GL+L+A + +P ++WD  F   +YLINR+P+ +I     +  L+ 
Sbjct: 527 QNGVVERKHRHIVELGLTLLAQAELPMQFWDHAFLTGVYLINRLPSSSIQNVVPYHKLFH 586

Query: 384 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 205
           QPP Y  LRIFGC CFPH R YN  KL+ RSQ  VFLGYS   KGYK L    ++  S D
Sbjct: 587 QPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADERLYISND 646

Query: 204 VVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVL 97
           VVFNE  FP+ +  +SS      +V H   S+P+ +
Sbjct: 647 VVFNETKFPYKELFSSSTA----SVSHHPISVPLTI 678



 Score =  114 bits (284), Expect(2) = 4e-62
 Identities = 53/127 (41%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
 Frame = -1

Query: 929 FCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIW 753
           FC+ C + KSH+LP + S      P  L++ DLWGP+P+ S+ G  YYV F+D  T+F W
Sbjct: 404 FCTPCCLGKSHRLPSNLSKIVYNTPFDLVYNDLWGPAPVTSTCGYQYYVTFVDAHTRFTW 463

Query: 752 IYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPY 573
           IY L+ ++ TFNVF  F ++V NQ +  IK +Q+D G E +  T   +E GI H++ C +
Sbjct: 464 IYLLKNKAQTFNVFKQFHAMVNNQYHHPIKALQTDWGGEYRSFTNYLNEVGIQHRLICRH 523

Query: 572 TPNKMGL 552
           T ++ G+
Sbjct: 524 THHQNGV 530


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1165

 Score =  135 bits (339), Expect(2) = 8e-62
 Identities = 63/126 (50%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
 Frame = -1

Query: 929 FCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFID-FTKFIW 753
           FC  C   K+H LPF  SV    EPL L+H+D+WGP+P+ S +G  YYV+F+D +++F W
Sbjct: 398 FCEACQFGKAHNLPFQNSVSCAKEPLDLVHSDVWGPAPISSVSGFKYYVLFLDDWSRFTW 457

Query: 752 IYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPY 573
           IY L+ +SD F  F+ F++LVENQ NKRIK +Q DGG E K L+K   + GI  + SCPY
Sbjct: 458 IYPLKQKSDVFQAFIQFRNLVENQFNKRIKTLQCDGGGEFKSLSKVLIKTGIQLRESCPY 517

Query: 572 TPNKMG 555
           T  + G
Sbjct: 518 TSAQNG 523



 Score =  131 bits (329), Expect(2) = 8e-62
 Identities = 61/130 (46%), Positives = 85/130 (65%)
 Frame = -3

Query: 564 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 385
           QNG  ERKHRH++E GL+L+A + +P  YW + F  +++LINR+P + I  KS ++ L+ 
Sbjct: 521 QNGRAERKHRHVVESGLTLLAQAKMPLHYWWEAFSTAVFLINRLPTQVIKNKSPYQQLFD 580

Query: 384 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 205
           + P Y+ ++ FGC C+P  + YN  KL+  +   VFLGYS   KGYK L   G+I  SR 
Sbjct: 581 KNPDYTAMKTFGCACYPCLKPYNQHKLQFHTTKCVFLGYSGSHKGYKCLNSTGRIFISRH 640

Query: 204 VVFNEEIFPF 175
           VVFNE  FPF
Sbjct: 641 VVFNEHHFPF 650


>gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 600

 Score =  143 bits (360), Expect(2) = 8e-62
 Identities = 67/156 (42%), Positives = 102/156 (65%), Gaps = 5/156 (3%)
 Frame = -3

Query: 564 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 385
           QNG +ER+H H++E+GL+++ ++ +P ++WD  F  + YLINR+P+ +IG +S + +++ 
Sbjct: 286 QNGIVERRHIHVVELGLAMLHHASLPLKFWDHGFLTATYLINRLPSSSIGHQSPYHLIHH 345

Query: 384 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 205
           + P Y  L+IFGC CFP  R YN  K++PRS+  +FLGYS   KGYK L   G+I  S+D
Sbjct: 346 KEPDYQFLKIFGCSCFPLLRPYNQHKIQPRSEECLFLGYSPTHKGYKCLSKSGRIYISKD 405

Query: 204 VVFNEEIFPF-----LKTKNSSIVLSQQNVQHLTPS 112
           VVFNE  FP+      K+ +S+   S  N+  L  S
Sbjct: 406 VVFNESRFPYQDLFVSKSVSSTPATSVSNIPSLIHS 441



 Score =  123 bits (308), Expect(2) = 8e-62
 Identities = 55/127 (43%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
 Frame = -1

Query: 929 FCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYVVFIDF-TKFIW 753
           FC  C ++KSH+LP   S    ++PL+L+  D+WGP+ L+SS G  Y++  +D  T+++W
Sbjct: 163 FCDSCCIAKSHRLPSQPSSSVYSKPLELVFLDVWGPASLESSWGYMYFLTCVDACTRYMW 222

Query: 752 IYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSECGIIHQISCPY 573
           IY L  +SD F+ FL+FK+L E Q    +K VQ+DGG E +PLT    + GIIH+++CP+
Sbjct: 223 IYLLHRKSDVFSHFLNFKTLAEKQFQTLLKSVQTDGGGEFRPLTSFLQQHGIIHRLTCPH 282

Query: 572 TPNKMGL 552
           T ++ G+
Sbjct: 283 THHQNGI 289