BLASTX nr result

ID: Rehmannia28_contig00031534 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00031534
         (544 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011083502.1| PREDICTED: zinc finger CCCH domain-containin...    65   2e-09
ref|XP_011074649.1| PREDICTED: zinc finger CCCH domain-containin...    64   7e-09
ref|XP_004152656.1| PREDICTED: zinc finger CCCH domain-containin...    55   8e-06

>ref|XP_011083502.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Sesamum
           indicum]
          Length = 504

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = -2

Query: 543 DINYYKSLIQQHGGERRDGSSQFAHQGDQPMGTSQEHLN 427
           DINYYKSLIQQHGGERR+   QFAHQ +QP G+SQE LN
Sbjct: 403 DINYYKSLIQQHGGERRETMPQFAHQSNQPPGSSQEPLN 441


>ref|XP_011074649.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Sesamum indicum]
          Length = 475

 Score = 63.9 bits (154), Expect = 7e-09
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = -2

Query: 543 DINYYKSLIQQHGGERRDGSSQFAHQGDQPMGTSQEHLNFV 421
           DINYYKSL+QQHG ERRD   QFAHQ +Q MGTS+E  NF+
Sbjct: 374 DINYYKSLVQQHGAERRDILPQFAHQSNQSMGTSREPSNFI 414


>ref|XP_004152656.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Cucumis
           sativus] gi|700207546|gb|KGN62665.1| hypothetical
           protein Csa_2G366700 [Cucumis sativus]
          Length = 441

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 2/40 (5%)
 Frame = -2

Query: 543 DINYYKSLIQQHGGERRDG--SSQFAHQGDQPMGTSQEHL 430
           D+NYYKSLIQQHGGER+D     QF ++ +QPMGT+QE L
Sbjct: 339 DLNYYKSLIQQHGGERQDDPPRQQFVNRHNQPMGTNQEFL 378


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