BLASTX nr result
ID: Rehmannia28_contig00031448
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00031448
(346 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP45563.1| Retrovirus-related Pol polyprotein from transposo... 56 3e-10
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl... 57 3e-10
gb|KYP63416.1| Retrovirus-related Pol polyprotein from transposo... 54 3e-10
emb|CAN71425.1| hypothetical protein VITISV_002520 [Vitis vinifera] 55 5e-10
emb|CAN74165.1| hypothetical protein VITISV_026445 [Vitis vinifera] 56 2e-09
gb|KYP68427.1| Retrovirus-related Pol polyprotein from transposo... 52 2e-09
gb|KYP61428.1| Retrovirus-related Pol polyprotein from transposo... 54 3e-09
gb|KYP64910.1| Retrovirus-related Pol polyprotein from transposo... 54 3e-09
gb|KYP31265.1| Retrovirus-related Pol polyprotein from transposo... 54 4e-09
gb|KYP62017.1| Retrovirus-related Pol polyprotein from transposo... 54 5e-09
emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera] 53 7e-09
emb|CAN70863.1| hypothetical protein VITISV_027145 [Vitis vinifera] 59 9e-09
emb|CAN60411.1| hypothetical protein VITISV_036515 [Vitis vinifera] 59 1e-08
emb|CAN65517.1| hypothetical protein VITISV_004206 [Vitis vinifera] 59 1e-08
ref|XP_010559036.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR... 51 2e-08
emb|CAN64687.1| hypothetical protein VITISV_013734 [Vitis vinifera] 58 3e-08
emb|CAN75140.1| hypothetical protein VITISV_015881 [Vitis vinifera] 57 3e-08
emb|CAN76589.1| hypothetical protein VITISV_020290 [Vitis vinifera] 58 4e-08
emb|CAN80786.1| hypothetical protein VITISV_039570 [Vitis vinifera] 57 4e-08
emb|CAN83445.1| hypothetical protein VITISV_008075 [Vitis vinifera] 57 5e-08
>gb|KYP45563.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 338
Score = 55.8 bits (133), Expect(2) = 3e-10
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = -3
Query: 203 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFD 51
+N+LK +GYS S+FA C D+RK T YVFLL GG + FV+CF+
Sbjct: 241 SNHLKVIGYSDSDFARCVDSRKSTLGYVFLLAGGAISWKSAKQTVVASSTIEAEFVACFE 300
Query: 50 AMSLAIWLRSFIS 12
A A WLR+FIS
Sbjct: 301 ATIQANWLRNFIS 313
Score = 35.8 bits (81), Expect(2) = 3e-10
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 333 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQEPNARSL 214
RP ++ AGML YQSN G+E+ AKKV+ YLQ L
Sbjct: 196 RPNISFVAGMLGRYQSNPGMEHWKVAKKVLRYLQRTKCHML 236
>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 57.4 bits (137), Expect(2) = 3e-10
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Frame = -3
Query: 215 YIQINNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FV 63
Y Q +N L A+GYS S+FA C D+R+ TS Y+F++ GG ++ FV
Sbjct: 1156 YRQTDN-LDAIGYSDSDFAGCVDSRRSTSGYIFMMAGGAISWGSVKQSLAATSTMEAEFV 1214
Query: 62 SCFDAMSLAIWLRSFIS 12
SCF+A S +WL+SFIS
Sbjct: 1215 SCFEATSHGVWLKSFIS 1231
Score = 33.9 bits (76), Expect(2) = 3e-10
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -2
Query: 318 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 235
A GML YQSN G+++ AAKKV+ YLQ
Sbjct: 1120 AVGMLGRYQSNPGIDHWRAAKKVLRYLQ 1147
>gb|KYP63416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 278
Score = 53.5 bits (127), Expect(2) = 3e-10
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = -3
Query: 203 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFD 51
+N+L+ +GYS S+FA C D+RK T YVF+L GG + FV+CF+
Sbjct: 114 SNHLEVIGYSDSDFAGCVDSRKSTLGYVFILAGGAISWKSAKQTVVASSTMEAEFVACFE 173
Query: 50 AMSLAIWLRSFIS 12
A A WLR+FIS
Sbjct: 174 ATIQANWLRNFIS 186
Score = 37.7 bits (86), Expect(2) = 3e-10
Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Frame = -2
Query: 333 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 235
RP ++ AAGML YQSN G+E+ AAKKV+ YLQ
Sbjct: 69 RPDISFAAGMLGRYQSNPGMEHWKAAKKVLRYLQ 102
>emb|CAN71425.1| hypothetical protein VITISV_002520 [Vitis vinifera]
Length = 480
Score = 55.5 bits (132), Expect(2) = 5e-10
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 42
L+ VGYS S+FA C D+ K TS Y+F+L GG ++ F+SCF+A S
Sbjct: 321 LEVVGYSDSDFAGCVDSHKSTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFEATS 380
Query: 41 LAIWLRSFIS 12
+WL+SFIS
Sbjct: 381 HGVWLKSFIS 390
Score = 35.0 bits (79), Expect(2) = 5e-10
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -2
Query: 318 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 235
A GML YQSN G+++ AAKKVM YLQ
Sbjct: 279 AVGMLGRYQSNPGIDHWKAAKKVMRYLQ 306
>emb|CAN74165.1| hypothetical protein VITISV_026445 [Vitis vinifera]
Length = 378
Score = 55.8 bits (133), Expect(2) = 2e-09
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 42
L+ VGYS S+FA C D+ K TS Y+F+LVGG ++ F+SCF+A S
Sbjct: 219 LEVVGYSDSDFASCVDSCKSTSGYIFILVGGAISWRSVKQTMTATSTMEAEFISCFEATS 278
Query: 41 LAIWLRSFIS 12
+WL+SFIS
Sbjct: 279 HGVWLKSFIS 288
Score = 32.7 bits (73), Expect(2) = 2e-09
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -2
Query: 318 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 235
A GML YQSN +++ AAKKVM YLQ
Sbjct: 177 AVGMLGRYQSNPSIDHWKAAKKVMRYLQ 204
>gb|KYP68427.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 216
Score = 52.0 bits (123), Expect(2) = 2e-09
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Frame = -3
Query: 203 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGG-----ENKC*AINS----C*FVSCFD 51
+N+L+ +GYS S+FA C D+RK T YVFLL G K + S FV+CF+
Sbjct: 53 SNHLEVIGYSDSDFAECVDSRKSTLGYVFLLARGAISWKSEKQIVVASLTMKAEFVACFE 112
Query: 50 AMSLAIWLRSFIS 12
A A WLR+FIS
Sbjct: 113 ATIQANWLRNFIS 125
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = -2
Query: 333 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 235
RP ++ AGML YQSN G+E+ AAKKV+ YLQ
Sbjct: 8 RPNISFVAGMLGRYQSNPGMEHWKAAKKVLRYLQ 41
>gb|KYP61428.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 402
Score = 53.5 bits (127), Expect(2) = 3e-09
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = -3
Query: 203 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFD 51
+N+L+ +GYS S+FA C D+RK T YVF+L GG + FV+CF+
Sbjct: 238 SNHLEVIGYSDSDFAGCVDSRKSTLGYVFILAGGAISWKSAKQTVVASSTMEAEFVACFE 297
Query: 50 AMSLAIWLRSFIS 12
A A WLR+FIS
Sbjct: 298 ATIQANWLRNFIS 310
Score = 34.7 bits (78), Expect(2) = 3e-09
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = -2
Query: 333 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 235
RP ++ AA ML YQSN G+E+ AAKKV+ YLQ
Sbjct: 193 RPDISFAARMLGRYQSNPGMEHWKAAKKVLRYLQ 226
>gb|KYP64910.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 371
Score = 54.3 bits (129), Expect(2) = 3e-09
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Frame = -3
Query: 203 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFD 51
+++L+ +GYS S+FA C DTRK T Y+F+L GG + FV+CF+
Sbjct: 250 SDHLEVIGYSDSDFAGCVDTRKSTFDYLFMLAGGAISWKSAKQSVIAASTMEAEFVACFE 309
Query: 50 AMSLAIWLRSFIS 12
AM A WLR+FIS
Sbjct: 310 AMVQAKWLRNFIS 322
Score = 33.5 bits (75), Expect(2) = 3e-09
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 333 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 235
RP ++ A GML YQSN +++ AAKKVM YLQ
Sbjct: 205 RPDISFAVGMLGRYQSNPDIDHWKAAKKVMRYLQ 238
>gb|KYP31265.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 425
Score = 54.3 bits (129), Expect(2) = 4e-09
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFDAMS 42
L+ +GYS S+FA C DTRK TS YVF+L G + FVSCF+A S
Sbjct: 266 LEVIGYSDSDFAGCIDTRKSTSGYVFMLACGAVSWSSRKQTLTATSTMEAEFVSCFEATS 325
Query: 41 LAIWLRSFIS 12
+WL+SFIS
Sbjct: 326 HGVWLKSFIS 335
Score = 33.1 bits (74), Expect(2) = 4e-09
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -2
Query: 318 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 235
A G+L YQSN G+++ AAKKVM YLQ
Sbjct: 224 AVGVLGRYQSNPGVDHWKAAKKVMRYLQ 251
>gb|KYP62017.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 215
Score = 54.3 bits (129), Expect(2) = 5e-09
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFDAMS 42
L+ +GYS S+FA C DTRK TS YVF+L G + FVSCF+A S
Sbjct: 56 LEVIGYSDSDFAGCIDTRKSTSGYVFMLACGAVSWSSRKQTLTATSTMEAEFVSCFEATS 115
Query: 41 LAIWLRSFIS 12
+WL+SFIS
Sbjct: 116 HGVWLKSFIS 125
Score = 33.1 bits (74), Expect(2) = 5e-09
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -2
Query: 318 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 235
A G+L YQSN G+++ AAKKVM YLQ
Sbjct: 14 AVGVLGRYQSNPGVDHWKAAKKVMRYLQ 41
>emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]
Length = 745
Score = 53.1 bits (126), Expect(2) = 7e-09
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 42
L+ VGYS S+FA C D+RK TS Y+F+L GG ++ F+SCF+ S
Sbjct: 547 LEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFETTS 606
Query: 41 LAIWLRSFI 15
+WL SFI
Sbjct: 607 HGVWLTSFI 615
Score = 33.5 bits (75), Expect(2) = 7e-09
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -2
Query: 318 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 235
A GML YQSN G ++ AAKKVM YLQ
Sbjct: 505 AVGMLGRYQSNPGKDHWKAAKKVMRYLQ 532
>emb|CAN70863.1| hypothetical protein VITISV_027145 [Vitis vinifera]
Length = 167
Score = 59.3 bits (142), Expect = 9e-09
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 9/70 (12%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 42
L+ VGYS S+FA C D+RK TS Y+F+LVGG +I F+SCF+A S
Sbjct: 8 LEVVGYSDSDFAGCVDSRKSTSGYIFILVGGAISWRSIKQTMTATSTMEAEFISCFEATS 67
Query: 41 LAIWLRSFIS 12
+WL+SFIS
Sbjct: 68 HGVWLKSFIS 77
>emb|CAN60411.1| hypothetical protein VITISV_036515 [Vitis vinifera]
Length = 156
Score = 58.9 bits (141), Expect = 1e-08
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 42
LK VGYS S+FA C D+RK TS Y+F+L GG ++ F+SCF+A S
Sbjct: 8 LKVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFEATS 67
Query: 41 LAIWLRSFIS 12
+WL+SFIS
Sbjct: 68 HGVWLKSFIS 77
>emb|CAN65517.1| hypothetical protein VITISV_004206 [Vitis vinifera]
Length = 167
Score = 58.9 bits (141), Expect = 1e-08
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 9/70 (12%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 42
L+ VGYS S+FA C D+RK TS Y+F+L GG ++ F+SCF+A+S
Sbjct: 8 LEVVGYSDSDFAGCFDSRKLTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFEAIS 67
Query: 41 LAIWLRSFIS 12
+WL+SFIS
Sbjct: 68 HGVWLKSFIS 77
>ref|XP_010559036.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein
At1g16930-like [Tarenaya hassleriana]
Length = 679
Score = 51.2 bits (121), Expect(2) = 2e-08
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = -3
Query: 203 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFD 51
+N+L+ +GYS S++A C DTRK Y+FLL GG + FV+CF+
Sbjct: 97 SNHLEVIGYSDSDYAVCVDTRKSNFGYLFLLAGGAVSWRSGKQSVIAASTMEAEFVACFE 156
Query: 50 AMSLAIWLRSFIS 12
A ++W+R+FIS
Sbjct: 157 ATVHSLWMRNFIS 169
Score = 34.3 bits (77), Expect(2) = 2e-08
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 333 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 235
RP ++ A GML YQSN G+ + AAKKV+ YLQ
Sbjct: 52 RPDISFAVGMLGRYQSNPGMNHWKAAKKVLRYLQ 85
>emb|CAN64687.1| hypothetical protein VITISV_013734 [Vitis vinifera]
Length = 167
Score = 58.2 bits (139), Expect = 3e-08
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 42
L+ VGYS S+FA C D+RK TS Y+F+L GG ++ F+SCF+A S
Sbjct: 8 LEVVGYSDSDFAGCVDSRKSTSRYIFILAGGAISWRSVKQTMTXTSTMEAEFISCFEATS 67
Query: 41 LAIWLRSFIS 12
+WL+SFIS
Sbjct: 68 HGVWLKSFIS 77
>emb|CAN75140.1| hypothetical protein VITISV_015881 [Vitis vinifera]
Length = 139
Score = 57.4 bits (137), Expect = 3e-08
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 9/69 (13%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 42
L+ VGYS S+FA C D+RK TS Y+F+LVGG ++ F+SCF+A S
Sbjct: 8 LEVVGYSDSDFAGCVDSRKSTSGYIFILVGGAISWRSVKQTMTSTFTMEAEFISCFEATS 67
Query: 41 LAIWLRSFI 15
+WL+SFI
Sbjct: 68 HGVWLKSFI 76
>emb|CAN76589.1| hypothetical protein VITISV_020290 [Vitis vinifera]
Length = 167
Score = 57.8 bits (138), Expect = 4e-08
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 9/70 (12%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 42
L+ VGYS S+FA C D+RK TS Y+F++VGG ++ F+SCF+A S
Sbjct: 8 LEVVGYSDSDFAGCVDSRKSTSGYIFIMVGGAISWRSVKQTMTATSTMEVEFISCFEATS 67
Query: 41 LAIWLRSFIS 12
+WL+SFIS
Sbjct: 68 HGVWLKSFIS 77
>emb|CAN80786.1| hypothetical protein VITISV_039570 [Vitis vinifera]
Length = 157
Score = 57.4 bits (137), Expect = 4e-08
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 42
LK VGYS S FA C D+ K TS Y+F+L GG ++ F+SCF+A S
Sbjct: 8 LKVVGYSXSNFAGCVDSHKSTSXYIFILAGGAISWXSVKQTMTATSTMEAEFISCFEATS 67
Query: 41 LAIWLRSFIS 12
+WL+SFIS
Sbjct: 68 HGVWLKSFIS 77
>emb|CAN83445.1| hypothetical protein VITISV_008075 [Vitis vinifera]
Length = 167
Score = 57.4 bits (137), Expect = 5e-08
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Frame = -3
Query: 194 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 42
L+ VGYS S+FA C D+RK TS Y+F+L GG ++ F+SCF+A S
Sbjct: 8 LEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFEATS 67
Query: 41 LAIWLRSFIS 12
+WL+SFIS
Sbjct: 68 HGVWLKSFIS 77