BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00031430
         (339 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP40247.1| Retrovirus-related Pol polyprotein from transposo...   184   6e-55
gb|KYP34729.1| Retrovirus-related Pol polyprotein from transposo...   190   6e-54
gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposo...   189   1e-53
gb|KYP74314.1| Retrovirus-related Pol polyprotein from transposo...   187   6e-53
gb|KYP45103.1| Retrovirus-related Pol polyprotein from transposo...   177   7e-53
gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposo...   186   9e-53
gb|KYP42175.1| Retrovirus-related Pol polyprotein from transposo...   175   2e-52
gb|KYP37063.1| Retrovirus-related Pol polyprotein from transposo...   161   1e-48
gb|KYP75541.1| Retrovirus-related Pol polyprotein from transposo...   163   2e-45
gb|KYP72097.1| hypothetical protein KK1_004678 [Cajanus cajan]        152   2e-45
gb|KYP49899.1| hypothetical protein KK1_028398 [Cajanus cajan]        150   2e-41
gb|KYP50397.1| Retrovirus-related Pol polyprotein from transposo...   141   3e-41
gb|ABI34329.1| Integrase core domain containing protein [Solanum...   148   2e-39
gb|KYP37955.1| Retrovirus-related Pol polyprotein from transposo...   136   2e-38
gb|ABI34342.1| Polyprotein, putative [Solanum demissum]               145   2e-38
gb|KHN06274.1| Retrovirus-related Pol polyprotein from transposo...   145   3e-38
gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposo...   145   3e-38
gb|KYP34536.1| Retrovirus-related Pol polyprotein from transposo...   139   6e-38
gb|KYP48169.1| Retrovirus-related Pol polyprotein from transposo...   135   1e-37
ref|XP_009778353.1| PREDICTED: uncharacterized protein LOC104227...   142   2e-37

>gb|KYP40247.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 385

 Score =  184 bits (466), Expect = 6e-55
 Identities = 88/113 (77%), Positives = 97/113 (85%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           DSFLIQDRSTGQTIG GS+S GLYYLQP+ ST+CA+  SP L+HRRLGHPSL KLK MVP
Sbjct: 150 DSFLIQDRSTGQTIGVGSKSHGLYYLQPSTSTICASVESPSLIHRRLGHPSLNKLKKMVP 209

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
            LS LESL CESCQLGKHVR SF N IN+RA S FD++HSDVWGPSRVPS+LG
Sbjct: 210 HLSCLESLECESCQLGKHVRTSFPNSINSRAVSPFDVIHSDVWGPSRVPSLLG 262


>gb|KYP34729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1180

 Score =  190 bits (482), Expect = 6e-54
 Identities = 90/113 (79%), Positives = 100/113 (88%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           DSFLIQDRSTGQTIGAGSES GLYYLQP+ ST+CA+  SP L+HRRLGHPSL KLK MVP
Sbjct: 224 DSFLIQDRSTGQTIGAGSESHGLYYLQPSTSTICASIESPGLIHRRLGHPSLNKLKKMVP 283

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
            LS+LESL CESCQLGKHVRASF N +N+RA  LFD++HSDVWGPSRVPS+LG
Sbjct: 284 HLSRLESLECESCQLGKHVRASFPNSVNSRAMCLFDVIHSDVWGPSRVPSLLG 336


>gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1402

 Score =  189 bits (480), Expect = 1e-53
 Identities = 90/113 (79%), Positives = 100/113 (88%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           DSFLIQDRSTGQTIGAGSES GLYYLQP+ ST+CA+  SP L+HRRLGHPSL KLK MVP
Sbjct: 429 DSFLIQDRSTGQTIGAGSESHGLYYLQPSTSTICASIESPGLIHRRLGHPSLNKLKKMVP 488

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
            LS+LESL CESCQLGKHVRASF N IN+RA S FD++HSDVWGPSR+PS+LG
Sbjct: 489 HLSRLESLECESCQLGKHVRASFPNSINSRAMSPFDVIHSDVWGPSRIPSLLG 541


>gb|KYP74314.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1275

 Score =  187 bits (474), Expect = 6e-53
 Identities = 90/113 (79%), Positives = 99/113 (87%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           DSFLIQDRSTGQTIGAGSES GLYYLQP+ ST+CA+  SP L+HRRLGHPSL KLK MVP
Sbjct: 429 DSFLIQDRSTGQTIGAGSESHGLYYLQPSTSTICASIESPGLIHRRLGHPSLNKLKKMVP 488

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
            LS+L SL CESCQLGKHVRASF N IN+RA S FD++HSDVWGPSRVPS+LG
Sbjct: 489 HLSRLVSLECESCQLGKHVRASFPNSINSRAMSPFDVIHSDVWGPSRVPSLLG 541


>gb|KYP45103.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 326

 Score =  177 bits (448), Expect = 7e-53
 Identities = 85/113 (75%), Positives = 94/113 (83%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           DSFLIQDRSTGQTIG G ES GLYYLQ + ST+CA+  SP L+HRRLGHPSL KLK MVP
Sbjct: 150 DSFLIQDRSTGQTIGVGYESHGLYYLQSSTSTICASVESPSLIHRRLGHPSLNKLKKMVP 209

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
            LS+LESL CESCQLGKHVR SF   I +RA S FD++HSDVWGPSRVPS+LG
Sbjct: 210 HLSRLESLECESCQLGKHVRTSFPKSIKSRAVSPFDVIHSDVWGPSRVPSLLG 262


>gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1355

 Score =  186 bits (473), Expect = 9e-53
 Identities = 89/113 (78%), Positives = 99/113 (87%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           DSFLIQDRSTGQTIGAGSES GLYYLQP+ ST+CA+  SP L+HRRLGHPSL KLK MVP
Sbjct: 382 DSFLIQDRSTGQTIGAGSESHGLYYLQPSTSTICASIESPGLIHRRLGHPSLNKLKKMVP 441

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
            LS+L SL CESCQLGKHVRASF N IN+RA S FD++HSDVWGPSR+PS+LG
Sbjct: 442 HLSRLVSLECESCQLGKHVRASFPNSINSRAMSPFDVIHSDVWGPSRIPSLLG 494


>gb|KYP42175.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 304

 Score =  175 bits (444), Expect = 2e-52
 Identities = 85/113 (75%), Positives = 94/113 (83%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           DSFLIQDRSTGQTIG G ES GLYYLQ + ST+CA+  SP L+HRRLGHPSL KLK MVP
Sbjct: 86  DSFLIQDRSTGQTIGVGYESHGLYYLQSSTSTICASVESPSLIHRRLGHPSLNKLKKMVP 145

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
            LS+LESL CESCQLGKHVR SF   IN+RA S FD++HSDVWG SRVPS+LG
Sbjct: 146 HLSRLESLECESCQLGKHVRTSFPKSINSRAVSPFDVIHSDVWGLSRVPSLLG 198


>gb|KYP37063.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 175

 Score =  161 bits (407), Expect = 1e-48
 Identities = 81/113 (71%), Positives = 89/113 (78%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           DSFLIQDRSTGQ I  GSES GLYYLQP+ ST      S  L+HRRLGHPSL KLK MVP
Sbjct: 51  DSFLIQDRSTGQMIRVGSESHGLYYLQPSTST---TVESASLIHRRLGHPSLNKLKKMVP 107

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
            LS+LESL CESCQLGKHVR SF N IN+R  S FD++HSDVWGP+ VPS+LG
Sbjct: 108 HLSRLESLECESCQLGKHVRTSFPNSINSRVVSPFDVIHSDVWGPNCVPSLLG 160


>gb|KYP75541.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 568

 Score =  163 bits (412), Expect = 2e-45
 Identities = 77/103 (74%), Positives = 87/103 (84%)
 Frame = -1

Query: 309 GQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVPGLSQLESLNC 130
           GQTIGAGSES GLYY +P+ ST+CA+  SP L+H RLGHPSL KLK MVP LS+LESL C
Sbjct: 2   GQTIGAGSESHGLYYFKPSTSTICASVESPSLIHCRLGHPSLNKLKKMVPYLSRLESLKC 61

Query: 129 ESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
           ESCQLGKHVR SF N INNRA S FD++HS+VWGPSRVPS+LG
Sbjct: 62  ESCQLGKHVRTSFPNSINNRAVSPFDVIHSNVWGPSRVPSLLG 104


>gb|KYP72097.1| hypothetical protein KK1_004678 [Cajanus cajan]
          Length = 163

 Score =  152 bits (385), Expect = 2e-45
 Identities = 75/97 (77%), Positives = 83/97 (85%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           DSFLIQDRSTGQTI AGSES GLYYLQP+ ST+CA+  SP L+HRRLGHP+L KLK MVP
Sbjct: 31  DSFLIQDRSTGQTIRAGSESHGLYYLQPSTSTICASIESPGLIHRRLGHPNLNKLKKMVP 90

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDI 49
            LS+LESL CESCQLGKHVRASF N IN+RA S FD+
Sbjct: 91  HLSRLESLECESCQLGKHVRASFPNSINSRAMSPFDV 127


>gb|KYP49899.1| hypothetical protein KK1_028398 [Cajanus cajan]
          Length = 476

 Score =  150 bits (380), Expect = 2e-41
 Identities = 75/97 (77%), Positives = 82/97 (84%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           DSFLIQDRSTGQTIGAGSES GLYYLQP+ ST+CA+  SP L+HRRLGHPSL KLK MVP
Sbjct: 377 DSFLIQDRSTGQTIGAGSESHGLYYLQPSTSTICASIESPGLIHRRLGHPSLNKLKKMVP 436

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDI 49
            LS+L SL CESCQLGKHVRA F N IN+RA S F+I
Sbjct: 437 HLSRLVSLECESCQLGKHVRAYFPNSINSRAMSPFEI 473


>gb|KYP50397.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 139

 Score =  141 bits (356), Expect = 3e-41
 Identities = 66/91 (72%), Positives = 75/91 (82%)
 Frame = -1

Query: 273 LYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVPGLSQLESLNCESCQLGKHVRAS 94
           LYYLQ + ST+CA+  SP L+HRRLGHPSL KLK MVP LS+LESL CESCQLGKHVR S
Sbjct: 1   LYYLQSSTSTICASVESPSLIHRRLGHPSLNKLKKMVPHLSRLESLECESCQLGKHVRTS 60

Query: 93  FSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
           F   IN+R  S FD++HSDVWGPSRVPS+LG
Sbjct: 61  FPKSINSRVVSPFDVIHSDVWGPSRVPSLLG 91


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score =  148 bits (374), Expect = 2e-39
 Identities = 72/114 (63%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTIS-TLCAATASPDLLHRRLGHPSLPKLKTMV 163
           D FL+QDRSTGQ IG G ES+GLYYL  + S   C+ T SPDL+H+RLGH SL KL+ MV
Sbjct: 445 DFFLMQDRSTGQMIGTGHESQGLYYLTSSNSLAACSITDSPDLIHKRLGHSSLSKLQKMV 504

Query: 162 PGLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
           P LS L +L+CESCQLGKH RA+FS     R+ S+F +VHSD+WGPSRV S LG
Sbjct: 505 PSLSSLSTLDCESCQLGKHTRATFSRSTEGRSESIFSLVHSDIWGPSRVSSTLG 558


>gb|KYP37955.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 193

 Score =  136 bits (342), Expect = 2e-38
 Identities = 67/111 (60%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
 Frame = -1

Query: 336 SFLIQDRSTGQTIGAGSESRGLYY--LQPTISTLCAATASPDLLHRRLGHPSLPKLKTMV 163
           SF+IQ+R T + IGAG ES GLYY  +QP +S  C A  SP LLH RLGHPSL KLK +V
Sbjct: 71  SFVIQERGTSRKIGAGHESGGLYYFEMQPPVS--CVAVLSPKLLHDRLGHPSLSKLKLLV 128

Query: 162 PGLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPS 10
           P L +L  L CESCQLGKHVR+SF  + + R +S+F  +HSD+WGPSRV S
Sbjct: 129 PSLQKLAELGCESCQLGKHVRSSFPKQTDKRCNSIFTTIHSDIWGPSRVTS 179


>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score =  145 bits (367), Expect = 2e-38
 Identities = 70/111 (63%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
 Frame = -1

Query: 330 LIQDRSTGQTIGAGSESRGLYYLQPTIS-TLCAATASPDLLHRRLGHPSLPKLKTMVPGL 154
           L  DR+TGQ IG G ES+GLYYL  + S T C+ T SPDL+H+RLGHPSL KL+ MVP L
Sbjct: 209 LASDRNTGQMIGTGHESQGLYYLTSSNSLTACSITDSPDLIHKRLGHPSLSKLQKMVPSL 268

Query: 153 SQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
           S L +L+CESCQLGKH RA+FS     R+ S+F +VHSD+WGPSRV S LG
Sbjct: 269 SSLSTLDCESCQLGKHTRATFSRSTEGRSESIFSLVHSDIWGPSRVSSTLG 319


>gb|KHN06274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1353

 Score =  145 bits (366), Expect = 3e-38
 Identities = 68/110 (61%), Positives = 82/110 (74%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           +SF+IQ+  TG+ IG G ESRGLYYL+P  S  C+AT++P LLH RLGHPSLPKLK M+P
Sbjct: 390 NSFVIQEHGTGRLIGEGRESRGLYYLKPNFSVSCSATSNPKLLHDRLGHPSLPKLKMMIP 449

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPS 10
            L  L  L CE CQLGKHVR+SF   +  R +S F I+HSD+WGPSRV S
Sbjct: 450 SLKNLRVLECEPCQLGKHVRSSFPKTV-QRCNSAFSIIHSDIWGPSRVSS 498


>gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1378

 Score =  145 bits (366), Expect = 3e-38
 Identities = 67/110 (60%), Positives = 84/110 (76%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           +SF+IQ+R TG+ IG G ESRGLYY + + S  C A+++P LLH RLGHP L KLK MVP
Sbjct: 408 NSFVIQERGTGRLIGGGHESRGLYYFETSPSVSCFASSTPKLLHDRLGHPHLTKLKKMVP 467

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPS 10
            L++L++L CESCQLGKHVR+SF  R   R +S F I+HSD+WGPSRV S
Sbjct: 468 SLNKLQALECESCQLGKHVRSSFPKRTETRCNSAFSIIHSDIWGPSRVTS 517


>gb|KYP34536.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 372

 Score =  139 bits (351), Expect = 6e-38
 Identities = 68/112 (60%), Positives = 83/112 (74%), Gaps = 2/112 (1%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYY--LQPTISTLCAATASPDLLHRRLGHPSLPKLKTM 166
           +SF+IQ+R TG+ IGAG ES GLYY  +QP +S  C A  SP LLH RLGHPSL KLK +
Sbjct: 9   ESFVIQERGTGRKIGAGHESGGLYYFEMQPPVS--CVAVLSPKLLHDRLGHPSLSKLKLL 66

Query: 165 VPGLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPS 10
           VP L +LE L CESCQLGKHVR+SF  + + R +S+F  +HSD+WGPS V S
Sbjct: 67  VPSLQKLEELGCESCQLGKHVRSSFPKQTDKRCNSIFTTIHSDIWGPSHVTS 118


>gb|KYP48169.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 224

 Score =  135 bits (339), Expect = 1e-37
 Identities = 63/110 (57%), Positives = 75/110 (68%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQPTISTLCAATASPDLLHRRLGHPSLPKLKTMVP 160
           +SF+IQ+R TG+ IGAG ES GLYY +      C    SP LLH RLGHPSL KLK +VP
Sbjct: 70  ESFVIQERGTGRKIGAGHESSGLYYFETQPPVSCVVVLSPTLLHDRLGHPSLSKLKLLVP 129

Query: 159 GLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPS 10
            L  LE L CESCQLGKHVR SF  + + R +S+F  +H D+WGPS V S
Sbjct: 130 SLKNLEELGCESCQLGKHVRPSFPKQTDTRCNSIFTTIHFDIWGPSHVTS 179


>ref|XP_009778353.1| PREDICTED: uncharacterized protein LOC104227744 [Nicotiana
           sylvestris]
          Length = 1133

 Score =  142 bits (359), Expect = 2e-37
 Identities = 71/114 (62%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
 Frame = -1

Query: 339 DSFLIQDRSTGQTIGAGSESRGLYYLQP-TISTLCAATASPDLLHRRLGHPSLPKLKTMV 163
           DSF++QDRST  TIG G ES  LYYL   + ST C  T  PDL+HR LGHPSL KL+ MV
Sbjct: 591 DSFIMQDRSTRWTIGIGRESESLYYLNSLSPSTACLVTDPPDLIHRLLGHPSLSKLQRMV 650

Query: 162 PGLSQLESLNCESCQLGKHVRASFSNRINNRASSLFDIVHSDVWGPSRVPSILG 1
           P LS L  L CESCQLGKH RASF+  + + A S+F +VHSD+WGPSRV S LG
Sbjct: 651 PSLSSLYRLECESCQLGKHTRASFTCSVESHAESVFSLVHSDIWGPSRVSSTLG 704