BLASTX nr result

ID: Rehmannia28_contig00031411 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00031411
         (482 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080393.1| PREDICTED: nuclear poly(A) polymerase 4-like...   107   3e-24
ref|XP_011072441.1| PREDICTED: nuclear poly(A) polymerase 4-like...    94   2e-19
ref|XP_011072440.1| PREDICTED: nuclear poly(A) polymerase 4-like...    94   2e-19
ref|XP_011080401.1| PREDICTED: nuclear poly(A) polymerase 4-like...    74   2e-12

>ref|XP_011080393.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X1 [Sesamum
           indicum]
          Length = 748

 Score =  107 bits (267), Expect = 3e-24
 Identities = 66/131 (50%), Positives = 78/131 (59%), Gaps = 12/131 (9%)
 Frame = +2

Query: 23  CSAAFE-TMKEKTGTSGSCLVMDKMTPEVVSVISRNMCTGSSGCELS----------DLI 169
           CS+A   TMKE   T+ SC +MD   PE VS  SR++CTGSS   L           D  
Sbjct: 582 CSSAMSGTMKEVAATNESCTLMDGRAPEAVSFNSRHVCTGSSMRMLQLVDRDKELPDDSK 641

Query: 170 TSNQAKQCAENSDTGCNSSIGNAYCTSGSYDDSEINNKGSSQDGAYEA-SPLLSDNGREK 346
           TSNQ K CAENSDT CNSS  N+   S SY   E+N  GS  D +Y+A +PLL DNG  K
Sbjct: 642 TSNQEKHCAENSDTCCNSSSSNSSYGSSSYSGLEVNKNGSLLDDSYKAGAPLLLDNGCNK 701

Query: 347 DASVLGDGLPE 379
           ++SVLGD L E
Sbjct: 702 ESSVLGDALLE 712


>ref|XP_011072441.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X2 [Sesamum
           indicum]
          Length = 751

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 59/133 (44%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
 Frame = +2

Query: 23  CSAAFETMKEKTGTSGSCLVMDKMTPEVVSVISRNMCTGSSGCELS----------DLIT 172
           CS A  TM+EKT   GSCL MD MT +   +   + CT S+   L           D I 
Sbjct: 586 CSTASYTMEEKTAVEGSCLFMDGMTQQEAPLTPGDACTRSNEVGLQLVDRDKELNIDFIK 645

Query: 173 SNQAKQCAENSDTGCNSSIGNAYCTSGSYDDSEINNKGSSQD-GAYEASPLLSDNGREKD 349
            NQ   C+EN+D GC SS  N++C S S  +  IN +G S D      + LLS+ GRE D
Sbjct: 646 PNQGMHCSENTDAGCVSSTCNSHCAS-SGGNLGINVEGPSLDRSCVSNTQLLSNKGREND 704

Query: 350 ASVLGDGLPEELE 388
           ASVLGDGL E+LE
Sbjct: 705 ASVLGDGLREKLE 717


>ref|XP_011072440.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X1 [Sesamum
           indicum]
          Length = 752

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 59/133 (44%), Positives = 73/133 (54%), Gaps = 11/133 (8%)
 Frame = +2

Query: 23  CSAAFETMKEKTGTSGSCLVMDKMTPEVVSVISRNMCTGSSGCELS----------DLIT 172
           CS A  TM+EKT   GSCL MD MT +   +   + CT S+   L           D I 
Sbjct: 586 CSTASYTMEEKTAVEGSCLFMDGMTQQEAPLTPGDACTRSNEVGLQLVDRDKELNIDFIK 645

Query: 173 SNQAKQCAENSDTGCNSSIGNAYCTSGSYDDSEINNKGSSQD-GAYEASPLLSDNGREKD 349
            NQ   C+EN+D GC SS  N++C S S  +  IN +G S D      + LLS+ GRE D
Sbjct: 646 PNQGMHCSENTDAGCVSSTCNSHCAS-SGGNLGINVEGPSLDRSCVSNTQLLSNKGREND 704

Query: 350 ASVLGDGLPEELE 388
           ASVLGDGL E+LE
Sbjct: 705 ASVLGDGLREKLE 717


>ref|XP_011080401.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X2 [Sesamum
           indicum]
          Length = 709

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 46/94 (48%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
 Frame = +2

Query: 23  CSAAFE-TMKEKTGTSGSCLVMDKMTPEVVSVISRNMCTGSSGCEL----------SDLI 169
           CS+A   TMKE   T+ SC +MD   PE VS  SR++CTGSS   L           D  
Sbjct: 582 CSSAMSGTMKEVAATNESCTLMDGRAPEAVSFNSRHVCTGSSMRMLQLVDRDKELPDDSK 641

Query: 170 TSNQAKQCAENSDTGCNSSIGNAYCTSGSYDDSE 271
           TSNQ K CAENSDT CNSS  N+   S SY   E
Sbjct: 642 TSNQEKHCAENSDTCCNSSSSNSSYGSSSYSGLE 675


Top