BLASTX nr result

ID: Rehmannia28_contig00031400 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00031400
         (325 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012858363.1| PREDICTED: cleavage and polyadenylation spec...   153   3e-41
ref|XP_012858362.1| PREDICTED: cleavage and polyadenylation spec...   153   3e-41
ref|XP_011101139.1| PREDICTED: cleavage and polyadenylation spec...   152   1e-40
ref|XP_011101138.1| PREDICTED: cleavage and polyadenylation spec...   152   1e-40
ref|XP_009798117.1| PREDICTED: cleavage and polyadenylation spec...   146   1e-38
ref|XP_009798109.1| PREDICTED: cleavage and polyadenylation spec...   146   1e-38
ref|XP_009798102.1| PREDICTED: cleavage and polyadenylation spec...   146   1e-38
ref|XP_009798098.1| PREDICTED: cleavage and polyadenylation spec...   146   1e-38
ref|XP_009593080.1| PREDICTED: cleavage and polyadenylation spec...   146   1e-38
ref|XP_009593079.1| PREDICTED: cleavage and polyadenylation spec...   146   1e-38
ref|XP_009593078.1| PREDICTED: cleavage and polyadenylation spec...   146   1e-38
ref|XP_015070075.1| PREDICTED: cleavage and polyadenylation spec...   144   4e-38
ref|XP_010317467.1| PREDICTED: cleavage and polyadenylation spec...   144   4e-38
ref|XP_006348057.1| PREDICTED: cleavage and polyadenylation spec...   144   4e-38
ref|XP_010277399.1| PREDICTED: cleavage and polyadenylation spec...   143   1e-37
ref|XP_010662375.1| PREDICTED: cleavage and polyadenylation spec...   143   1e-37
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   143   1e-37
emb|CBI24510.3| unnamed protein product [Vitis vinifera]              143   1e-37
ref|XP_010918168.1| PREDICTED: cleavage and polyadenylation spec...   140   9e-37
ref|XP_010918167.1| PREDICTED: cleavage and polyadenylation spec...   140   9e-37

>ref|XP_012858363.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X2 [Erythranthe guttata]
           gi|604299650|gb|EYU19493.1| hypothetical protein
           MIMGU_mgv1a000203mg [Erythranthe guttata]
          Length = 1437

 Score =  153 bits (387), Expect = 3e-41
 Identities = 74/81 (91%), Positives = 79/81 (97%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           TIVSSVSIADPYVLLRM+DGSIQLLVGDPSTCSVSVT PPVFESSDK+V+ACTLYHDKGP
Sbjct: 682 TIVSSVSIADPYVLLRMSDGSIQLLVGDPSTCSVSVTIPPVFESSDKMVAACTLYHDKGP 741

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           E WLR+TSTDAWLSTGIGE+I
Sbjct: 742 ELWLRRTSTDAWLSTGIGESI 762


>ref|XP_012858362.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X1 [Erythranthe guttata]
          Length = 1440

 Score =  153 bits (387), Expect = 3e-41
 Identities = 74/81 (91%), Positives = 79/81 (97%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           TIVSSVSIADPYVLLRM+DGSIQLLVGDPSTCSVSVT PPVFESSDK+V+ACTLYHDKGP
Sbjct: 682 TIVSSVSIADPYVLLRMSDGSIQLLVGDPSTCSVSVTIPPVFESSDKMVAACTLYHDKGP 741

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           E WLR+TSTDAWLSTGIGE+I
Sbjct: 742 ELWLRRTSTDAWLSTGIGESI 762


>ref|XP_011101139.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X2 [Sesamum indicum]
          Length = 1250

 Score =  152 bits (383), Expect = 1e-40
 Identities = 74/81 (91%), Positives = 76/81 (93%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           TIVSSVSIADPYVLLRM DGSIQLLVGD STCSVSVT PP FESS+K+VSACTLYHDKGP
Sbjct: 484 TIVSSVSIADPYVLLRMVDGSIQLLVGDSSTCSVSVTIPPAFESSNKLVSACTLYHDKGP 543

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLSTG GEAI
Sbjct: 544 EPWLRKTSTDAWLSTGTGEAI 564


>ref|XP_011101138.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X1 [Sesamum indicum]
          Length = 1451

 Score =  152 bits (383), Expect = 1e-40
 Identities = 74/81 (91%), Positives = 76/81 (93%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           TIVSSVSIADPYVLLRM DGSIQLLVGD STCSVSVT PP FESS+K+VSACTLYHDKGP
Sbjct: 685 TIVSSVSIADPYVLLRMVDGSIQLLVGDSSTCSVSVTIPPAFESSNKLVSACTLYHDKGP 744

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLSTG GEAI
Sbjct: 745 EPWLRKTSTDAWLSTGTGEAI 765


>ref|XP_009798117.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X4 [Nicotiana sylvestris]
           gi|698433880|ref|XP_009798123.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 1 isoform X4
           [Nicotiana sylvestris]
          Length = 907

 Score =  146 bits (368), Expect = 1e-38
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           +IVSSVSIADPYVLLRMT+GSIQLL GDPS+CSVSVT P +FESS K VSACTLYHDKGP
Sbjct: 142 SIVSSVSIADPYVLLRMTNGSIQLLAGDPSSCSVSVTVPSIFESSKKSVSACTLYHDKGP 201

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLS+G+GEAI
Sbjct: 202 EPWLRKTSTDAWLSSGMGEAI 222


>ref|XP_009798109.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X3 [Nicotiana sylvestris]
          Length = 1060

 Score =  146 bits (368), Expect = 1e-38
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           +IVSSVSIADPYVLLRMT+GSIQLL GDPS+CSVSVT P +FESS K VSACTLYHDKGP
Sbjct: 295 SIVSSVSIADPYVLLRMTNGSIQLLAGDPSSCSVSVTVPSIFESSKKSVSACTLYHDKGP 354

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLS+G+GEAI
Sbjct: 355 EPWLRKTSTDAWLSSGMGEAI 375


>ref|XP_009798102.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X2 [Nicotiana sylvestris]
          Length = 1102

 Score =  146 bits (368), Expect = 1e-38
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           +IVSSVSIADPYVLLRMT+GSIQLL GDPS+CSVSVT P +FESS K VSACTLYHDKGP
Sbjct: 337 SIVSSVSIADPYVLLRMTNGSIQLLAGDPSSCSVSVTVPSIFESSKKSVSACTLYHDKGP 396

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLS+G+GEAI
Sbjct: 397 EPWLRKTSTDAWLSSGMGEAI 417


>ref|XP_009798098.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X1 [Nicotiana sylvestris]
          Length = 1103

 Score =  146 bits (368), Expect = 1e-38
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           +IVSSVSIADPYVLLRMT+GSIQLL GDPS+CSVSVT P +FESS K VSACTLYHDKGP
Sbjct: 338 SIVSSVSIADPYVLLRMTNGSIQLLAGDPSSCSVSVTVPSIFESSKKSVSACTLYHDKGP 397

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLS+G+GEAI
Sbjct: 398 EPWLRKTSTDAWLSSGMGEAI 418


>ref|XP_009593080.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X3 [Nicotiana tomentosiformis]
          Length = 1400

 Score =  146 bits (368), Expect = 1e-38
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           +IVSSVSIADPYVLLRMT+GSIQLL GDPS+CSVSVT P +FESS K VSACTLYHDKGP
Sbjct: 635 SIVSSVSIADPYVLLRMTNGSIQLLAGDPSSCSVSVTVPSIFESSKKSVSACTLYHDKGP 694

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLS+G+GEAI
Sbjct: 695 EPWLRKTSTDAWLSSGMGEAI 715


>ref|XP_009593079.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X2 [Nicotiana tomentosiformis]
          Length = 1442

 Score =  146 bits (368), Expect = 1e-38
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           +IVSSVSIADPYVLLRMT+GSIQLL GDPS+CSVSVT P +FESS K VSACTLYHDKGP
Sbjct: 677 SIVSSVSIADPYVLLRMTNGSIQLLAGDPSSCSVSVTVPSIFESSKKSVSACTLYHDKGP 736

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLS+G+GEAI
Sbjct: 737 EPWLRKTSTDAWLSSGMGEAI 757


>ref|XP_009593078.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X1 [Nicotiana tomentosiformis]
          Length = 1443

 Score =  146 bits (368), Expect = 1e-38
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           +IVSSVSIADPYVLLRMT+GSIQLL GDPS+CSVSVT P +FESS K VSACTLYHDKGP
Sbjct: 678 SIVSSVSIADPYVLLRMTNGSIQLLAGDPSSCSVSVTVPSIFESSKKSVSACTLYHDKGP 737

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLS+G+GEAI
Sbjct: 738 EPWLRKTSTDAWLSSGMGEAI 758


>ref|XP_015070075.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Solanum pennellii]
          Length = 1447

 Score =  144 bits (364), Expect = 4e-38
 Identities = 68/81 (83%), Positives = 77/81 (95%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           +IV+SVSIADPYVLLRMT+GS+QLLVGDPS+CSVS+T P VFESS K +SACTLYHDKGP
Sbjct: 679 SIVASVSIADPYVLLRMTNGSLQLLVGDPSSCSVSLTVPSVFESSKKSISACTLYHDKGP 738

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLS+G+GEAI
Sbjct: 739 EPWLRKTSTDAWLSSGMGEAI 759


>ref|XP_010317467.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Solanum lycopersicum]
          Length = 1447

 Score =  144 bits (364), Expect = 4e-38
 Identities = 68/81 (83%), Positives = 77/81 (95%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           +IV+SVSIADPYVLLRMT+GS+QLLVGDPS+CSVS+T P VFESS K +SACTLYHDKGP
Sbjct: 679 SIVASVSIADPYVLLRMTNGSLQLLVGDPSSCSVSLTVPSVFESSKKSISACTLYHDKGP 738

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLS+G+GEAI
Sbjct: 739 EPWLRKTSTDAWLSSGMGEAI 759


>ref|XP_006348057.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Solanum tuberosum]
          Length = 1447

 Score =  144 bits (364), Expect = 4e-38
 Identities = 68/81 (83%), Positives = 77/81 (95%)
 Frame = -2

Query: 282 TIVSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGP 103
           +IV+SVSIADPYVLLRMT+GS+QLLVGDPS+CSVS+T P VFESS K +SACTLYHDKGP
Sbjct: 679 SIVASVSIADPYVLLRMTNGSLQLLVGDPSSCSVSLTVPSVFESSKKSISACTLYHDKGP 738

Query: 102 EPWLRKTSTDAWLSTGIGEAI 40
           EPWLRKTSTDAWLS+G+GEAI
Sbjct: 739 EPWLRKTSTDAWLSSGMGEAI 759


>ref|XP_010277399.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 [Nelumbo nucifera]
          Length = 1457

 Score =  143 bits (361), Expect = 1e-37
 Identities = 68/79 (86%), Positives = 73/79 (92%)
 Frame = -2

Query: 276 VSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGPEP 97
           VSS SIADPYVLLRM+DGSIQLL+GDPSTC+VSVT P VFES  + +SACTLYHDKGPEP
Sbjct: 688 VSSASIADPYVLLRMSDGSIQLLIGDPSTCTVSVTVPAVFESLKESISACTLYHDKGPEP 747

Query: 96  WLRKTSTDAWLSTGIGEAI 40
           WLRKTSTDAWLSTGIGEAI
Sbjct: 748 WLRKTSTDAWLSTGIGEAI 766


>ref|XP_010662375.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X2 [Vitis vinifera]
          Length = 1301

 Score =  143 bits (360), Expect = 1e-37
 Identities = 68/79 (86%), Positives = 73/79 (92%)
 Frame = -2

Query: 276 VSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGPEP 97
           V SVSIADPYVLLRM+DG+IQLLVGDPSTC+VS+  P VFESS K +SACTLYHDKGPEP
Sbjct: 672 VLSVSIADPYVLLRMSDGNIQLLVGDPSTCTVSINIPAVFESSKKSISACTLYHDKGPEP 731

Query: 96  WLRKTSTDAWLSTGIGEAI 40
           WLRKTSTDAWLSTGIGEAI
Sbjct: 732 WLRKTSTDAWLSTGIGEAI 750


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X1 [Vitis vinifera]
           gi|731423119|ref|XP_010662374.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 1 isoform X1
           [Vitis vinifera]
          Length = 1442

 Score =  143 bits (360), Expect = 1e-37
 Identities = 68/79 (86%), Positives = 73/79 (92%)
 Frame = -2

Query: 276 VSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGPEP 97
           V SVSIADPYVLLRM+DG+IQLLVGDPSTC+VS+  P VFESS K +SACTLYHDKGPEP
Sbjct: 672 VLSVSIADPYVLLRMSDGNIQLLVGDPSTCTVSINIPAVFESSKKSISACTLYHDKGPEP 731

Query: 96  WLRKTSTDAWLSTGIGEAI 40
           WLRKTSTDAWLSTGIGEAI
Sbjct: 732 WLRKTSTDAWLSTGIGEAI 750


>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  143 bits (360), Expect = 1e-37
 Identities = 68/79 (86%), Positives = 73/79 (92%)
 Frame = -2

Query: 276 VSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGPEP 97
           V SVSIADPYVLLRM+DG+IQLLVGDPSTC+VS+  P VFESS K +SACTLYHDKGPEP
Sbjct: 678 VLSVSIADPYVLLRMSDGNIQLLVGDPSTCTVSINIPAVFESSKKSISACTLYHDKGPEP 737

Query: 96  WLRKTSTDAWLSTGIGEAI 40
           WLRKTSTDAWLSTGIGEAI
Sbjct: 738 WLRKTSTDAWLSTGIGEAI 756


>ref|XP_010918168.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X2 [Elaeis guineensis]
          Length = 1455

 Score =  140 bits (354), Expect = 9e-37
 Identities = 65/79 (82%), Positives = 72/79 (91%)
 Frame = -2

Query: 276 VSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGPEP 97
           V+SVSIADPYVLL+MTDGSIQLLVGDPS C+VSV  PP+F +S K++SACTLYHDKGPEP
Sbjct: 686 VASVSIADPYVLLKMTDGSIQLLVGDPSACTVSVNVPPIFANSTKLISACTLYHDKGPEP 745

Query: 96  WLRKTSTDAWLSTGIGEAI 40
           WLRKTSTDAWLSTGI E I
Sbjct: 746 WLRKTSTDAWLSTGIAEPI 764


>ref|XP_010918167.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1 isoform X1 [Elaeis guineensis]
          Length = 1456

 Score =  140 bits (354), Expect = 9e-37
 Identities = 65/79 (82%), Positives = 72/79 (91%)
 Frame = -2

Query: 276 VSSVSIADPYVLLRMTDGSIQLLVGDPSTCSVSVTTPPVFESSDKVVSACTLYHDKGPEP 97
           V+SVSIADPYVLL+MTDGSIQLLVGDPS C+VSV  PP+F +S K++SACTLYHDKGPEP
Sbjct: 686 VASVSIADPYVLLKMTDGSIQLLVGDPSACTVSVNVPPIFANSTKLISACTLYHDKGPEP 745

Query: 96  WLRKTSTDAWLSTGIGEAI 40
           WLRKTSTDAWLSTGI E I
Sbjct: 746 WLRKTSTDAWLSTGIAEPI 764


Top