BLASTX nr result

ID: Rehmannia28_contig00031015 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00031015
         (375 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1...    56   1e-07
ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus tr...    53   5e-07

>emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1| Putative 8.8 kDa
           protein in rps12-tRNA-Val intergenic region [Glycine
           soja]
          Length = 143

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +3

Query: 180 LVISFLHNFGNPRTQSYGYVKYRISNPSRK 269
           ++ S LH FGNPRTQSYGYVKYRISNPSRK
Sbjct: 55  MIRSTLHYFGNPRTQSYGYVKYRISNPSRK 84


>ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus trichocarpa]
           gi|134093268|ref|YP_001109569.1| hypothetical protein
           Poptr_cp092 [Populus trichocarpa]
           gi|133712111|gb|ABO36754.1| conserved hypothetical
           protein [Populus trichocarpa]
           gi|133712130|gb|ABO36773.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 65

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 26/31 (83%), Positives = 26/31 (83%)
 Frame = +1

Query: 178 ILSFPFYTISETQGLNHMDM*NTGFPILAGK 270
           I S  FYTISETQGLN MDM NTGFPILAGK
Sbjct: 26  IRSTSFYTISETQGLNRMDMENTGFPILAGK 56


Top