BLASTX nr result
ID: Rehmannia28_contig00030382
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia28_contig00030382 (1215 letters) Database: ./nr 84,704,028 sequences; 31,038,470,784 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214... 49 9e-10 ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240... 48 2e-07 ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240... 48 2e-07 ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-... 44 6e-07 >ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214830 [Nicotiana sylvestris] Length = 213 Score = 48.9 bits (115), Expect(2) = 9e-10 Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%) Frame = -2 Query: 779 IGSFWMCGTII--SFIRYWWYLSCPICPKKLSEAGNKLYCFGCDK 651 +G++W+ TII R W YL+C C KKL +AGNK YC C++ Sbjct: 85 LGNYWVVATIIHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ 129 Score = 43.5 bits (101), Expect(2) = 9e-10 Identities = 17/30 (56%), Positives = 25/30 (83%) Frame = -3 Query: 547 RYKLKIQVVDETGNVPLLLWDRDCEKLIGK 458 RY+L+++V+D TG + LLLWD+D K+IGK Sbjct: 136 RYRLQVKVMDCTGTISLLLWDKDATKIIGK 165 >ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240911 isoform X1 [Nicotiana sylvestris] Length = 282 Score = 47.8 bits (112), Expect(2) = 2e-07 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = -2 Query: 776 GSFWMCGTII--SFIRYWWYLSCPICPKKLSEAGNKLYCFGCDK 651 G++W+ TI+ R W YL+C C KKL +AGNK YC C++ Sbjct: 47 GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ 90 Score = 36.6 bits (83), Expect(2) = 2e-07 Identities = 15/30 (50%), Positives = 23/30 (76%) Frame = -3 Query: 547 RYKLKIQVVDETGNVPLLLWDRDCEKLIGK 458 RY+L+++V+D T + LLLWD+D K+I K Sbjct: 118 RYRLQVKVMDCTDTISLLLWDKDGTKIIEK 147 >ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240911 isoform X2 [Nicotiana sylvestris] Length = 278 Score = 47.8 bits (112), Expect(2) = 2e-07 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = -2 Query: 776 GSFWMCGTII--SFIRYWWYLSCPICPKKLSEAGNKLYCFGCDK 651 G++W+ TI+ R W YL+C C KKL +AGNK YC C++ Sbjct: 47 GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ 90 Score = 36.6 bits (83), Expect(2) = 2e-07 Identities = 15/30 (50%), Positives = 23/30 (76%) Frame = -3 Query: 547 RYKLKIQVVDETGNVPLLLWDRDCEKLIGK 458 RY+L+++V+D T + LLLWD+D K+I K Sbjct: 97 RYRLQVKVMDCTDTISLLLWDKDGTKIIEK 126 >ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like [Nicotiana sylvestris] Length = 302 Score = 43.9 bits (102), Expect(2) = 6e-07 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Frame = -2 Query: 797 IIFVLQIGSFWMCGTIISFI--RYWWYLSCPICPKKLSEAGNKLYCFGCDK 651 ++ ++ G W+ T+++ + + W YL C C KK+ + GNK +C CD+ Sbjct: 219 LVNCMEEGHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGNKFHCKKCDR 269 Score = 38.9 bits (89), Expect(2) = 6e-07 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = -3 Query: 547 RYKLKIQVVDETGNVPLLLWDRDCEK 470 RYKL++QV+D TG + LLLWDR+ + Sbjct: 277 RYKLRVQVMDHTGFISLLLWDREATR 302