BLASTX nr result

ID: Rehmannia28_contig00030382 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00030382
         (1215 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214...    49   9e-10
ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240...    48   2e-07
ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240...    48   2e-07
ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-...    44   6e-07

>ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214830 [Nicotiana
           sylvestris]
          Length = 213

 Score = 48.9 bits (115), Expect(2) = 9e-10
 Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = -2

Query: 779 IGSFWMCGTII--SFIRYWWYLSCPICPKKLSEAGNKLYCFGCDK 651
           +G++W+  TII     R W YL+C  C KKL +AGNK YC  C++
Sbjct: 85  LGNYWVVATIIHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ 129



 Score = 43.5 bits (101), Expect(2) = 9e-10
 Identities = 17/30 (56%), Positives = 25/30 (83%)
 Frame = -3

Query: 547 RYKLKIQVVDETGNVPLLLWDRDCEKLIGK 458
           RY+L+++V+D TG + LLLWD+D  K+IGK
Sbjct: 136 RYRLQVKVMDCTGTISLLLWDKDATKIIGK 165


>ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240911 isoform X1
           [Nicotiana sylvestris]
          Length = 282

 Score = 47.8 bits (112), Expect(2) = 2e-07
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = -2

Query: 776 GSFWMCGTII--SFIRYWWYLSCPICPKKLSEAGNKLYCFGCDK 651
           G++W+  TI+     R W YL+C  C KKL +AGNK YC  C++
Sbjct: 47  GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ 90



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 15/30 (50%), Positives = 23/30 (76%)
 Frame = -3

Query: 547 RYKLKIQVVDETGNVPLLLWDRDCEKLIGK 458
           RY+L+++V+D T  + LLLWD+D  K+I K
Sbjct: 118 RYRLQVKVMDCTDTISLLLWDKDGTKIIEK 147


>ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240911 isoform X2
           [Nicotiana sylvestris]
          Length = 278

 Score = 47.8 bits (112), Expect(2) = 2e-07
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = -2

Query: 776 GSFWMCGTII--SFIRYWWYLSCPICPKKLSEAGNKLYCFGCDK 651
           G++W+  TI+     R W YL+C  C KKL +AGNK YC  C++
Sbjct: 47  GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ 90



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 15/30 (50%), Positives = 23/30 (76%)
 Frame = -3

Query: 547 RYKLKIQVVDETGNVPLLLWDRDCEKLIGK 458
           RY+L+++V+D T  + LLLWD+D  K+I K
Sbjct: 97  RYRLQVKVMDCTDTISLLLWDKDGTKIIEK 126


>ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           [Nicotiana sylvestris]
          Length = 302

 Score = 43.9 bits (102), Expect(2) = 6e-07
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = -2

Query: 797 IIFVLQIGSFWMCGTIISFI--RYWWYLSCPICPKKLSEAGNKLYCFGCDK 651
           ++  ++ G  W+  T+++ +  + W YL C  C KK+ + GNK +C  CD+
Sbjct: 219 LVNCMEEGHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGNKFHCKKCDR 269



 Score = 38.9 bits (89), Expect(2) = 6e-07
 Identities = 15/26 (57%), Positives = 21/26 (80%)
 Frame = -3

Query: 547 RYKLKIQVVDETGNVPLLLWDRDCEK 470
           RYKL++QV+D TG + LLLWDR+  +
Sbjct: 277 RYKLRVQVMDHTGFISLLLWDREATR 302


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