BLASTX nr result
ID: Rehmannia28_contig00030195
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00030195
(311 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011094158.1| PREDICTED: double-stranded RNA-binding prote... 104 3e-24
ref|XP_011094157.1| PREDICTED: double-stranded RNA-binding prote... 104 4e-24
ref|XP_012828738.1| PREDICTED: double-stranded RNA-binding prote... 99 2e-22
ref|XP_010036235.1| PREDICTED: RNA polymerase II transcription f... 81 7e-17
gb|KCW47760.1| hypothetical protein EUGRSUZ_K01507 [Eucalyptus g... 81 6e-16
gb|KCW47759.1| hypothetical protein EUGRSUZ_K01507 [Eucalyptus g... 81 8e-16
ref|XP_009768744.1| PREDICTED: double-stranded RNA-binding prote... 74 1e-14
ref|XP_015062887.1| PREDICTED: double-stranded RNA-binding prote... 75 8e-14
ref|XP_015062886.1| PREDICTED: double-stranded RNA-binding prote... 75 8e-14
ref|XP_010319634.1| PREDICTED: double-stranded RNA-binding prote... 73 4e-13
ref|XP_004229058.1| PREDICTED: double-stranded RNA-binding prote... 73 4e-13
emb|CDP10526.1| unnamed protein product [Coffea canephora] 72 1e-12
ref|XP_015946985.1| PREDICTED: uncharacterized protein LOC107471... 71 2e-12
ref|XP_015946984.1| PREDICTED: uncharacterized protein LOC107471... 71 2e-12
ref|XP_015946983.1| PREDICTED: double-stranded RNA-binding prote... 71 2e-12
ref|XP_015946982.1| PREDICTED: double-stranded RNA-binding prote... 71 2e-12
ref|XP_015946981.1| PREDICTED: double-stranded RNA-binding prote... 71 2e-12
ref|XP_015946980.1| PREDICTED: double-stranded RNA-binding prote... 71 2e-12
ref|XP_015946978.1| PREDICTED: double-stranded RNA-binding prote... 71 2e-12
gb|KRH57883.1| hypothetical protein GLYMA_05G090000 [Glycine max] 71 2e-12
>ref|XP_011094158.1| PREDICTED: double-stranded RNA-binding protein 3-like isoform X2
[Sesamum indicum]
Length = 484
Score = 104 bits (259), Expect = 3e-24
Identities = 52/77 (67%), Positives = 62/77 (80%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNAPSSPPQVHRLP 181
TVK+GPDHMPRFTA VNVHG+VF+TP C+SAK+AQNTAA+IAFDHFN PSS P++HR
Sbjct: 22 TVKNGPDHMPRFTATVNVHGEVFQTPALCRSAKDAQNTAARIAFDHFNVPSS-PRLHRPL 80
Query: 182 QSTSAVTTVNSQVQGVS 232
S+SA+ V Q VS
Sbjct: 81 PSSSALPAVAFQFNDVS 97
>ref|XP_011094157.1| PREDICTED: double-stranded RNA-binding protein 3-like isoform X1
[Sesamum indicum]
Length = 511
Score = 104 bits (259), Expect = 4e-24
Identities = 52/77 (67%), Positives = 62/77 (80%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNAPSSPPQVHRLP 181
TVK+GPDHMPRFTA VNVHG+VF+TP C+SAK+AQNTAA+IAFDHFN PSS P++HR
Sbjct: 22 TVKNGPDHMPRFTATVNVHGEVFQTPALCRSAKDAQNTAARIAFDHFNVPSS-PRLHRPL 80
Query: 182 QSTSAVTTVNSQVQGVS 232
S+SA+ V Q VS
Sbjct: 81 PSSSALPAVAFQFNDVS 97
>ref|XP_012828738.1| PREDICTED: double-stranded RNA-binding protein 4-like [Erythranthe
guttata] gi|604298093|gb|EYU18181.1| hypothetical
protein MIMGU_mgv1a006202mg [Erythranthe guttata]
Length = 453
Score = 99.4 bits (246), Expect = 2e-22
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNAPSSPPQVHRLP 181
TVK GPDHM RFTA VNV+G FETP CKSAK+AQNTAA+IAF+HFNAP PP H LP
Sbjct: 22 TVKVGPDHMARFTAVVNVNGHRFETPEPCKSAKDAQNTAARIAFNHFNAPPPPPPAHALP 81
Query: 182 QSTSAV 199
++SA+
Sbjct: 82 TASSAI 87
>ref|XP_010036235.1| PREDICTED: RNA polymerase II transcription factor SIII subunit
A3-like [Eucalyptus grandis]
Length = 204
Score = 80.9 bits (198), Expect = 7e-17
Identities = 33/54 (61%), Positives = 45/54 (83%)
Frame = +2
Query: 5 VKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNAPSSPPQ 166
VK+GPDHMP FT V+++G F TP+ C+S+KEAQN AA++AFDHF+AP +PP+
Sbjct: 23 VKEGPDHMPSFTGTVSLNGSSFRTPHACRSSKEAQNEAARLAFDHFSAPRTPPR 76
>gb|KCW47760.1| hypothetical protein EUGRSUZ_K01507 [Eucalyptus grandis]
Length = 394
Score = 80.9 bits (198), Expect = 6e-16
Identities = 33/54 (61%), Positives = 45/54 (83%)
Frame = +2
Query: 5 VKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNAPSSPPQ 166
VK+GPDHMP FT V+++G F TP+ C+S+KEAQN AA++AFDHF+AP +PP+
Sbjct: 23 VKEGPDHMPSFTGTVSLNGSSFRTPHACRSSKEAQNEAARLAFDHFSAPRTPPR 76
>gb|KCW47759.1| hypothetical protein EUGRSUZ_K01507 [Eucalyptus grandis]
Length = 513
Score = 80.9 bits (198), Expect = 8e-16
Identities = 33/54 (61%), Positives = 45/54 (83%)
Frame = +2
Query: 5 VKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNAPSSPPQ 166
VK+GPDHMP FT V+++G F TP+ C+S+KEAQN AA++AFDHF+AP +PP+
Sbjct: 23 VKEGPDHMPSFTGTVSLNGSSFRTPHACRSSKEAQNEAARLAFDHFSAPRTPPR 76
>ref|XP_009768744.1| PREDICTED: double-stranded RNA-binding protein 3-like [Nicotiana
sylvestris]
Length = 148
Score = 73.6 bits (179), Expect = 1e-14
Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETPNG-CKSAKEAQNTAAQIAFDHFNAPSSPPQV--H 172
T K+GPDH PRFTA V V+G F +P C+S+KEAQN AA IAFDHF +P S + H
Sbjct: 22 TEKEGPDHNPRFTATVTVNGFSFASPKDHCRSSKEAQNLAAHIAFDHFTSPKSAQAISHH 81
Query: 173 RLPQSTSAVTTVNSQVQGVS 232
+P + A S G S
Sbjct: 82 NIPSPSPAAALPISSSSGAS 101
>ref|XP_015062887.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X3
[Solanum pennellii]
Length = 415
Score = 75.1 bits (183), Expect = 8e-14
Identities = 41/74 (55%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETP-NGCKSAKEAQNTAAQIAFDHFNAPSSPPQVHRL 178
T KDGPDH PRFTA V V+G FE+P + C+S+KEAQN AA IA+DHFN PQ L
Sbjct: 22 TEKDGPDHNPRFTATVVVNGVSFESPKDQCRSSKEAQNHAAHIAYDHFNL----PQRRNL 77
Query: 179 PQSTSAVTTVNSQV 220
P S T S+V
Sbjct: 78 PSSAPGAATSKSKV 91
>ref|XP_015062886.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X2
[Solanum pennellii]
Length = 417
Score = 75.1 bits (183), Expect = 8e-14
Identities = 41/74 (55%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETP-NGCKSAKEAQNTAAQIAFDHFNAPSSPPQVHRL 178
T KDGPDH PRFTA V V+G FE+P + C+S+KEAQN AA IA+DHFN PQ L
Sbjct: 22 TEKDGPDHNPRFTATVVVNGVSFESPKDQCRSSKEAQNHAAHIAYDHFNL----PQRRNL 77
Query: 179 PQSTSAVTTVNSQV 220
P S T S+V
Sbjct: 78 PSSAPGAATSKSKV 91
>ref|XP_010319634.1| PREDICTED: double-stranded RNA-binding protein 1 isoform X2
[Solanum lycopersicum]
Length = 415
Score = 73.2 bits (178), Expect = 4e-13
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETP-NGCKSAKEAQNTAAQIAFDHFNAPSSPPQVHRL 178
T KDGPDH PRFTA V V+G FE+P + C+S+KEAQN AA IA+DHFN PQ L
Sbjct: 22 TEKDGPDHNPRFTATVVVNGVSFESPKDQCRSSKEAQNHAAHIAYDHFNL----PQRRNL 77
Query: 179 PQSTSAVTTVNSQV 220
P S T +V
Sbjct: 78 PSSAPGAATSKCKV 91
>ref|XP_004229058.1| PREDICTED: double-stranded RNA-binding protein 1 isoform X1
[Solanum lycopersicum]
Length = 417
Score = 73.2 bits (178), Expect = 4e-13
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETP-NGCKSAKEAQNTAAQIAFDHFNAPSSPPQVHRL 178
T KDGPDH PRFTA V V+G FE+P + C+S+KEAQN AA IA+DHFN PQ L
Sbjct: 22 TEKDGPDHNPRFTATVVVNGVSFESPKDQCRSSKEAQNHAAHIAYDHFNL----PQRRNL 77
Query: 179 PQSTSAVTTVNSQV 220
P S T +V
Sbjct: 78 PSSAPGAATSKCKV 91
>emb|CDP10526.1| unnamed protein product [Coffea canephora]
Length = 488
Score = 71.6 bits (174), Expect = 1e-12
Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 5/59 (8%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETP-NGCKSAKEAQNTAAQIAFDHFNAP----SSPP 163
TVKDGPDH PRFT V V G FE+P N CKS+K++QN AA++A+DHF+A +SPP
Sbjct: 22 TVKDGPDHCPRFTTTVTVAGMSFESPLNQCKSSKDSQNVAAKLAYDHFSASPISVTSPP 80
>ref|XP_015946985.1| PREDICTED: uncharacterized protein LOC107471945 isoform X7 [Arachis
duranensis]
Length = 586
Score = 71.2 bits (173), Expect = 2e-12
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 7/61 (11%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNA-------PSSP 160
T +DGPDH PRFTAAV V+G +ETP+ C+++KEAQN AA +AF+H ++ PS P
Sbjct: 22 TTRDGPDHNPRFTAAVTVNGIRYETPSPCRNSKEAQNNAAMLAFEHLSSQQPSVINPSPP 81
Query: 161 P 163
P
Sbjct: 82 P 82
>ref|XP_015946984.1| PREDICTED: uncharacterized protein LOC107471945 isoform X6 [Arachis
duranensis]
Length = 588
Score = 71.2 bits (173), Expect = 2e-12
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 7/61 (11%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNA-------PSSP 160
T +DGPDH PRFTAAV V+G +ETP+ C+++KEAQN AA +AF+H ++ PS P
Sbjct: 22 TTRDGPDHNPRFTAAVTVNGIRYETPSPCRNSKEAQNNAAMLAFEHLSSQQPSVINPSPP 81
Query: 161 P 163
P
Sbjct: 82 P 82
>ref|XP_015946983.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X5
[Arachis duranensis]
Length = 639
Score = 71.2 bits (173), Expect = 2e-12
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 7/61 (11%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNA-------PSSP 160
T +DGPDH PRFTAAV V+G +ETP+ C+++KEAQN AA +AF+H ++ PS P
Sbjct: 22 TTRDGPDHNPRFTAAVTVNGIRYETPSPCRNSKEAQNNAAMLAFEHLSSQQPSVINPSPP 81
Query: 161 P 163
P
Sbjct: 82 P 82
>ref|XP_015946982.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X4
[Arachis duranensis]
Length = 641
Score = 71.2 bits (173), Expect = 2e-12
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 7/61 (11%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNA-------PSSP 160
T +DGPDH PRFTAAV V+G +ETP+ C+++KEAQN AA +AF+H ++ PS P
Sbjct: 22 TTRDGPDHNPRFTAAVTVNGIRYETPSPCRNSKEAQNNAAMLAFEHLSSQQPSVINPSPP 81
Query: 161 P 163
P
Sbjct: 82 P 82
>ref|XP_015946981.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X3
[Arachis duranensis]
Length = 673
Score = 71.2 bits (173), Expect = 2e-12
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 7/61 (11%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNA-------PSSP 160
T +DGPDH PRFTAAV V+G +ETP+ C+++KEAQN AA +AF+H ++ PS P
Sbjct: 22 TTRDGPDHNPRFTAAVTVNGIRYETPSPCRNSKEAQNNAAMLAFEHLSSQQPSVINPSPP 81
Query: 161 P 163
P
Sbjct: 82 P 82
>ref|XP_015946980.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X2
[Arachis duranensis]
Length = 673
Score = 71.2 bits (173), Expect = 2e-12
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 7/61 (11%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNA-------PSSP 160
T +DGPDH PRFTAAV V+G +ETP+ C+++KEAQN AA +AF+H ++ PS P
Sbjct: 22 TTRDGPDHNPRFTAAVTVNGIRYETPSPCRNSKEAQNNAAMLAFEHLSSQQPSVINPSPP 81
Query: 161 P 163
P
Sbjct: 82 P 82
>ref|XP_015946978.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X1
[Arachis duranensis]
Length = 675
Score = 71.2 bits (173), Expect = 2e-12
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 7/61 (11%)
Frame = +2
Query: 2 TVKDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNA-------PSSP 160
T +DGPDH PRFTAAV V+G +ETP+ C+++KEAQN AA +AF+H ++ PS P
Sbjct: 22 TTRDGPDHNPRFTAAVTVNGIRYETPSPCRNSKEAQNNAAMLAFEHLSSQQPSVINPSPP 81
Query: 161 P 163
P
Sbjct: 82 P 82
>gb|KRH57883.1| hypothetical protein GLYMA_05G090000 [Glycine max]
Length = 356
Score = 70.9 bits (172), Expect = 2e-12
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +2
Query: 8 KDGPDHMPRFTAAVNVHGQVFETPNGCKSAKEAQNTAAQIAFDHFNAPSSPPQVHRLPQS 187
++GPDH PRFT+ VNV+G F TP+ +SAK+AQN AA +AF HF+ PS PQ
Sbjct: 24 REGPDHNPRFTSTVNVNGVSFHTPSPTRSAKQAQNDAAMLAFLHFSPPSPSTSCPTFPQH 83
Query: 188 TSAVTTVNS 214
+ +++ ++S
Sbjct: 84 SLSISALSS 92