BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00030099
         (2391 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013745520.1| PREDICTED: uncharacterized protein LOC106448...   889   0.0  
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun...   751   0.0  
ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, part...   743   0.0  
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The...   741   0.0  
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun...   741   0.0  
ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The...   712   0.0  
gb|KYP57132.1| Retrotransposable element Tf2 [Cajanus cajan]          712   0.0  
gb|KYP78758.1| Transposon Ty3-I Gag-Pol polyprotein, partial [Ca...   712   0.0  
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   727   0.0  
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         726   0.0  
gb|KYP77891.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]   697   0.0  
emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]   692   0.0  
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   741   0.0  
ref|XP_007206823.1| hypothetical protein PRUPE_ppa025991mg [Prun...   711   0.0  
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   697   0.0  
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  718   0.0  
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   717   0.0  
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   717   0.0  
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  716   0.0  
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   712   0.0  

>ref|XP_013745520.1| PREDICTED: uncharacterized protein LOC106448142 [Brassica napus]
          Length = 701

 Score =  889 bits (2296), Expect = 0.0
 Identities = 429/690 (62%), Positives = 525/690 (76%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MRVMNQ+L P IG  VVVYFDDILI+S +  EHL HLR VL +LR EK F A HKC F V
Sbjct: 29   MRVMNQALHPFIGKFVVVYFDDILIFSTTLQEHLSHLRDVLLVLRHEKLFIAAHKCEFGV 88

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            +++LFLGY +SA G+R+D  KV A+ SWPTP SIT +RSFHGLA+FYRRF+ +FS+IMAP
Sbjct: 89   SQVLFLGYVVSATGLRVDPQKVAAVASWPTPTSITEIRSFHGLAAFYRRFVHNFSAIMAP 148

Query: 2031 LTDCMRGKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQG 1852
            LTDCM+  +F+W+  A  AF LIK+KL+TAP+L+LPDF LPFEL CDASK+GIGAVLSQ 
Sbjct: 149  LTDCMKNTTFSWSLAASQAFELIKTKLTTAPILVLPDFDLPFELHCDASKLGIGAVLSQQ 208

Query: 1851 ARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQD 1672
             RP+AY+SEK++G R RYS YD++FYA+V+AV+ WRHYL  +EFVLFTDH AL+Y+  QD
Sbjct: 209  GRPVAYYSEKMAGARARYSTYDVKFYAIVQAVKHWRHYLAHKEFVLFTDHVALRYLGTQD 268

Query: 1671 SVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYAT 1492
             +S+RHA W A+LQQFTFVIKH SG LN+VAD+LSRRH L+S LR+S+ GF+   ELY T
Sbjct: 269  KISSRHASWTAYLQQFTFVIKHPSGKLNKVADSLSRRHALVSTLRVSVVGFECLAELYPT 328

Query: 1491 DPYFNRILLQLNSGINGDFLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSGHVGRDRSIE 1312
            D +                                S  LRL+II ELH  GHVGRDR+++
Sbjct: 329  DAF--------------------------------SPRLRLQIIQELHKEGHVGRDRTLK 356

Query: 1311 LVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDFVMGLP 1132
            LV  SY+WPSLRRDV R+VARC  C   KG  +NAGLY PLPIP+QPW+ ISMDFV+GLP
Sbjct: 357  LVADSYYWPSLRRDVERFVARCTTCQEGKGHVSNAGLYLPLPIPTQPWSDISMDFVLGLP 416

Query: 1131 RTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSDRDTRF 952
            RTQRG+DSIFVVVDRFSKM HFIPCK+TTDA+ VA LFF EIYR+HGLP+SIVSDRD+RF
Sbjct: 417  RTQRGHDSIFVVVDRFSKMTHFIPCKKTTDAVQVASLFFWEIYRLHGLPTSIVSDRDSRF 476

Query: 951  LSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSRLSQAE 772
            +SHFWRSLW++  T LN SSAYHP TDGQTEVVNRSLGN+LRCLVG+NL+SWD+ L QAE
Sbjct: 477  ISHFWRSLWKLFKTSLNMSSAYHPHTDGQTEVVNRSLGNMLRCLVGDNLRSWDTLLCQAE 536

Query: 771  FAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHAAAQSH 592
            FAHN A N S G+SPF+VVYGV+PR PL L   P       RA +L+ E+  LH  AQ +
Sbjct: 537  FAHNHAHNWSLGYSPFKVVYGVVPRDPLALATTPQPGEFHGRAFELIEEITDLHTRAQDN 596

Query: 591  LVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIVEKINS 412
            L  ++ KYK   D  RR ++F+VG+ VWAVL K+R+P   Y KL  RK+GP+E + KIN+
Sbjct: 597  LAGTAIKYKREVDKKRREVNFQVGDHVWAVLIKERFPTGRYKKLLPRKIGPVEFIAKINA 656

Query: 411  NAYRLKLPSHLRTSDVFNVKHLIPFVGDNS 322
            NAY+L+LP+H+ T+DVFNVKHL  F  D++
Sbjct: 657  NAYKLRLPAHIHTADVFNVKHLFKFEPDDA 686


>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
            gi|462405925|gb|EMJ11389.1| hypothetical protein
            PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score =  751 bits (1939), Expect = 0.0
 Identities = 366/699 (52%), Positives = 488/699 (69%), Gaps = 4/699 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MNQ LRP IG+ VVVYFDDILIYS ++ EHL HLR VL +LR  K F    KC+F  
Sbjct: 760  MRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDVLRENKLFVNLKKCTFCT 819

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            N++LFLG+ +   GI++D  K++AI  WP P +++ VRSFHGLA+FYRRF+ HFSSI+AP
Sbjct: 820  NKLLFLGFVVGEHGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYRRFVRHFSSIVAP 879

Query: 2031 LTDCMRGKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQG 1852
            +T+C++   F+W  E + +F  IK KL TAP+L LP+F   FE+ CDAS VG+GAVLSQ 
Sbjct: 880  ITECLKKGRFSWGEEQERSFADIKEKLCTAPVLALPNFEKVFEVECDASGVGVGAVLSQD 939

Query: 1851 ARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQD 1672
             RP+A+FSEKLS  R ++S YD EFYAVVRA++ W HYL Q+EFVLFTDH+ALKYI++Q 
Sbjct: 940  KRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQALKYINSQK 999

Query: 1671 SVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYAT 1492
            ++   HA W  FLQ+F+FVIKH SG  NRVADALSRR  L+  L   + GF+  +ELY  
Sbjct: 1000 NIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLLITLTQEVVGFECLKELYEG 1059

Query: 1491 DPYFNRILLQ-LNSGINGDFLLVDGFLFKGIQLCVPSSSLRLKIIAELHG---SGHVGRD 1324
            D  F  I  +  N     D+ L +G+LFKG QLC+P SSLR K+I +LHG   SGH+GRD
Sbjct: 1060 DADFGEIWTKCTNQEPMADYFLNEGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHLGRD 1119

Query: 1323 RSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDFV 1144
            ++I  ++  ++WP L+RDV   V +C  C  +KG   N GLY PLP+P+  W  ++MDFV
Sbjct: 1120 KTIAGMEERFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFV 1179

Query: 1143 MGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSDR 964
            +GLPRTQRG DS+FVVVDRFSKM HFI C++T DA ++A+LFFRE+ R+HG+P+SI SDR
Sbjct: 1180 LGLPRTQRGVDSVFVVVDRFSKMAHFIACRKTADASNIAKLFFREVVRLHGVPTSITSDR 1239

Query: 963  DTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSRL 784
            DT+FLSHFW +LWR+  T LN SS  HPQTDGQTEV NR+LGN++R + GE  K WD  L
Sbjct: 1240 DTKFLSHFWITLWRLFGTTLNRSSTAHPQTDGQTEVTNRTLGNMVRSVCGEKPKQWDYAL 1299

Query: 783  SQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHAA 604
             Q EFA+NSAV+ ++G SPF +VY  +P   +DL+ LP   +  + A +L  E+  +   
Sbjct: 1300 PQVEFAYNSAVHSATGKSPFSIVYTAMPNHVVDLVKLPRGQQTSVAAKNLAEEVVAVRDE 1359

Query: 603  AQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIVE 424
             +  L  ++ KYK  AD HRR   F+ G+ V   L K+R+P   Y+KL  +K GP ++++
Sbjct: 1360 VKQKLEQTNAKYKAAADKHRRVKVFQEGDSVMIFLRKERFPVGTYSKLKPKKYGPYKVLK 1419

Query: 423  KINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEI 307
            +IN NAY ++LP  +  S++FNV  L  F  D     ++
Sbjct: 1420 RINDNAYVIELPDSMGISNIFNVADLYEFREDEVEGTDV 1458


>ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica]
            gi|462403623|gb|EMJ09180.1| hypothetical protein
            PRUPE_ppa015715mg, partial [Prunus persica]
          Length = 1445

 Score =  743 bits (1917), Expect = 0.0
 Identities = 358/693 (51%), Positives = 485/693 (69%), Gaps = 6/693 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MRVM   LRP IG  +VVYFDDILIYSRS  EHL HLR + S LR EK +A   KCSF  
Sbjct: 667  MRVMTHVLRPYIGKFLVVYFDDILIYSRSREEHLQHLRTIFSTLRKEKLYANLKKCSFLQ 726

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
              +LFLG+ ISA G+  D  KVEAI  WPTP ++T  RSFHGL SFYRRFIP FS+IMAP
Sbjct: 727  PEVLFLGFNISAAGVSTDPAKVEAIIDWPTPTTLTEARSFHGLTSFYRRFIPGFSTIMAP 786

Query: 2031 LTDCMRGKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQG 1852
            +TDCM+  +F WT  A  AF ++K K++ AP+L                       L+Q 
Sbjct: 787  ITDCMKQGAFLWTHAAAKAFTILKQKMTQAPVL-----------------------LNQE 823

Query: 1851 ARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQD 1672
              P+AYFSEKL+  + RYS YD EFYAVV+A+R+W++YL   EFVL++DH+ALKY+ +Q 
Sbjct: 824  GHPVAYFSEKLNEAKQRYSTYDKEFYAVVQALRYWQYYLLPNEFVLYSDHQALKYLHSQR 883

Query: 1671 SVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYAT 1492
            ++S+RH  W+ +LQ FTFV++H+ GI N+VADALSR   ++  + + + GFD  +  Y++
Sbjct: 884  TISSRHVKWSEYLQIFTFVLRHRPGIDNKVADALSRVATILHTMTVQVTGFDRIKTEYSS 943

Query: 1491 DPYFNRILLQLNSGING---DFLLVDGFLFKGIQLCVPSSSLRLKIIAELHG---SGHVG 1330
             P F  I  ++++G      DF+  DGFLF+G QLC+P +SLR  ++ ELHG   +GH G
Sbjct: 944  CPDFGIIFHEVSNGNRREYVDFITRDGFLFRGTQLCIPRTSLREFLVWELHGGGLAGHFG 1003

Query: 1329 RDRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMD 1150
            +D++I LV+  ++WPSL+RDV   +++CR C +AK    N GLY+PLPIP  PW  +SMD
Sbjct: 1004 KDKTIALVEDRFYWPSLKRDVAHLISQCRTCQLAKARKRNTGLYTPLPIPHTPWKDLSMD 1063

Query: 1149 FVMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVS 970
            FV+GLP+T RGYDSIFV+VDRFSKM HF+PC + TDA +VA+LFF+E+ R+HGLP SIVS
Sbjct: 1064 FVLGLPKTSRGYDSIFVIVDRFSKMAHFLPCAKNTDASYVAKLFFKEVVRLHGLPVSIVS 1123

Query: 969  DRDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDS 790
            DRD +F+S+FW++LW++  T L FSSA+HPQTDGQTEVVNRSLG+LLRCLVG+   +WD 
Sbjct: 1124 DRDVKFVSYFWKTLWKLFGTTLKFSSAFHPQTDGQTEVVNRSLGDLLRCLVGDKPGNWDL 1183

Query: 789  RLSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLH 610
             L  AEFA+N++VNRS+G SPF+VV+G  PR P+DL+ALP  AR    A      +++LH
Sbjct: 1184 LLPVAEFAYNNSVNRSTGKSPFEVVHGFSPRSPVDLVALPVAARTSDSATSFAEHIRQLH 1243

Query: 609  AAAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEI 430
               +  +   ++ YK+ A+AHRR  +F+ G+FV   +  +R+P H + KL AR +GP  I
Sbjct: 1244 DDVRRQISMHTDTYKLAANAHRRQQEFREGDFVMVRVCPERFPKHSFKKLHARSMGPYRI 1303

Query: 429  VEKINSNAYRLKLPSHLRTSDVFNVKHLIPFVG 331
            ++K+ SNAY ++LP+ +  S +FNV  L P+ G
Sbjct: 1304 IKKLGSNAYLIELPADMHISPIFNVSDLSPYRG 1336


>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 1452

 Score =  741 bits (1914), Expect = 0.0
 Identities = 357/703 (50%), Positives = 496/703 (70%), Gaps = 6/703 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MRVM + L+P + + VVVYFDDILIYS ++ +HL HLR VL +L+ E+ +    KCSF  
Sbjct: 675  MRVMAEVLKPFLNSFVVVYFDDILIYSHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQ 734

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
              ++FLG+ +SA+G++ D  K+ AI  WP P SI  VRSFHGLASFYRRFI +FSSIM+P
Sbjct: 735  PEVVFLGFIVSAEGLKPDPEKIRAISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSP 794

Query: 2031 LTDCMRGKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQG 1852
            +T+ ++   F W+  A  AF  +K+ ++ AP+L LPDF   F + CDAS VGIGAVLSQ 
Sbjct: 795  ITESLKKDGFEWSHSAQKAFERVKALMTEAPVLALPDFEKLFVVECDASYVGIGAVLSQD 854

Query: 1851 ARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQD 1672
             RPI +FSEKL+  R RYS YD+EFYA+VRA+R W+HYL  REF +++DH+AL+Y+ +Q 
Sbjct: 855  GRPIEFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQK 914

Query: 1671 SVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYAT 1492
             +S +HA W++FL +F F +K+KSG  N VADALSRR  ++S +   + GF+  +  Y++
Sbjct: 915  KLSNQHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSS 974

Query: 1491 DPYFNRILLQLNSGINGDFL---LVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVG 1330
            D YF++I+  L   +  + L   L + +LFKG QLC+P  SLR +II ELHG+G   H G
Sbjct: 975  DSYFSKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFG 1034

Query: 1329 RDRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMD 1150
            RD+++ +V   Y+WP +RRDV R V RC  C   KG+A N GLY PLP P  PW  +SMD
Sbjct: 1035 RDKTLVMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMD 1094

Query: 1149 FVMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVS 970
            FV+GLP+T +G+DSIFVVVDRFSKM HFIPC RT+DA H+A+LFFREI  +HG+P+SIVS
Sbjct: 1095 FVLGLPKTTKGFDSIFVVVDRFSKMAHFIPCFRTSDATHIAELFFREIVILHGIPTSIVS 1154

Query: 969  DRDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDS 790
            DR  +F+ +FWR+LWR   T+L +SS  HPQTDGQTEVVNRSLGN+LRCL+  N K+WD 
Sbjct: 1155 DRHVKFMGYFWRTLWRKFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQNNPKTWDL 1214

Query: 789  RLSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLH 610
             + QAEFA+N++VNRS   +PF+  YG+ P+  LDL+ LP  AR          +++++H
Sbjct: 1215 VIPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLVPLPQEARVSNEGELFADQIRKIH 1274

Query: 609  AAAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEI 430
               ++ L AS+ +Y  TA+ HRR  +F+ G+ V   L ++R+P   Y+KL +RK GP ++
Sbjct: 1275 EEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKV 1334

Query: 429  VEKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINA 301
            ++KI+SNAY ++LP  L+ + +FN+  L PF G + ++  I+A
Sbjct: 1335 LKKISSNAYLIELPPELQINPIFNILDLYPFDGCDGTASTIDA 1377


>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
            gi|462402874|gb|EMJ08431.1| hypothetical protein
            PRUPE_ppa026856mg [Prunus persica]
          Length = 1493

 Score =  741 bits (1913), Expect = 0.0
 Identities = 362/699 (51%), Positives = 482/699 (68%), Gaps = 4/699 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MNQ LRP IG+ VVVYFDDILIYS ++ EHL HLR VL +LR  K +    KC+F  
Sbjct: 768  MRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDVLRENKLYVNLKKCTFCT 827

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            N++LFLG+ +   GI++D  K++AI  WP P +++ VRSFHGLA+FY RF+ HFSSI AP
Sbjct: 828  NKLLFLGFVVGENGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYMRFVRHFSSIAAP 887

Query: 2031 LTDCMRGKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQG 1852
            +T+C++   F+W  E + +F  IK KL TAP+L LP+F   FE+ CDAS VG+GAVL Q 
Sbjct: 888  ITECLKKGRFSWGEEQERSFADIKEKLCTAPVLALPNFEKVFEVECDASGVGVGAVLLQD 947

Query: 1851 ARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQD 1672
             RP+A+FSEKLS  R ++S YD EFYAVVRA++ W HYL Q+EFVLFTDH+ALKYI++Q 
Sbjct: 948  KRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQALKYINSQK 1007

Query: 1671 SVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYAT 1492
            ++   HA W  FLQ+F+FVIKH SG  NRVADALSRR  L+  L   + GF+  +ELY  
Sbjct: 1008 NIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLLITLTQEVVGFECLKELYEG 1067

Query: 1491 DPYFNRILLQL-NSGINGDFLLVDGFLFKGIQLCVPSSSLRLKIIAELHG---SGHVGRD 1324
            D  F  I  +  N     D+ L +G+LFKG QLC+P SSLR K+I +LHG   SGH+GRD
Sbjct: 1068 DDDFREIWTKCTNQEPMTDYFLTEGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHLGRD 1127

Query: 1323 RSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDFV 1144
            ++I  ++  ++WP L+RDV   V +C  C  +KG   N GLY PLP+P+  W  ++MDFV
Sbjct: 1128 KTIAGMEERFYWPQLKRDVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFV 1187

Query: 1143 MGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSDR 964
            +G PRTQR  DS+FVV DRFSKM HFI CK+T DA ++A+LFFRE+ R+HG+P+SI SDR
Sbjct: 1188 LGFPRTQRRVDSVFVVADRFSKMAHFIACKKTADASNIAKLFFREVVRLHGVPTSITSDR 1247

Query: 963  DTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSRL 784
            DT+FLSHFW +LWR+  T LN SS  HPQTDGQTEV NR+LGN++R + GE  K WD  L
Sbjct: 1248 DTKFLSHFWITLWRLFGTTLNRSSTAHPQTDGQTEVTNRTLGNMVRSVCGEKPKQWDYAL 1307

Query: 783  SQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHAA 604
             Q EFA+NSAV+ ++G SPF +VY   P   +DL+ LP   +  + A +L  E+  +   
Sbjct: 1308 PQMEFAYNSAVHSATGKSPFSIVYTATPNHVVDLVKLPRGQQTSVAAKNLAEEVVAVRDE 1367

Query: 603  AQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIVE 424
             +  L  ++ KYK  AD HRR   F+ G+ V   L K+R+PA  Y+KL  +K GP ++++
Sbjct: 1368 VKQKLEQTNAKYKAAADRHRRVKVFQEGDSVMVFLRKERFPAGTYSKLKPKKYGPYKVLK 1427

Query: 423  KINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEI 307
            +IN NAY ++LP  +  S++FNV  L  F  D     ++
Sbjct: 1428 RINDNAYDIELPDSMGISNIFNVADLYEFREDEVEGTDV 1466


>ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508709261|gb|EOY01158.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 786

 Score =  712 bits (1839), Expect = 0.0
 Identities = 342/660 (51%), Positives = 467/660 (70%), Gaps = 6/660 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MRVM + L+P + + VVVYFDDILIYS ++ +HL HLR VL +L+ E+ +    KCSF  
Sbjct: 127  MRVMAEVLKPFLNSFVVVYFDDILIYSHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQ 186

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
              ++FLG+ +SA+G++ D  K+ AI  WP P SI  VRSFHGLASFYRRFI +FSSIM+P
Sbjct: 187  PEVVFLGFIVSAEGLKPDPEKIRAISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSP 246

Query: 2031 LTDCMRGKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQG 1852
            +T+ ++   F W+  A  AF  +K+ ++ AP+L LPDF   F + CDAS VGIGAVLSQ 
Sbjct: 247  ITESLKKDGFEWSHSAQKAFERVKALMTEAPVLALPDFEKLFVVECDASYVGIGAVLSQD 306

Query: 1851 ARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQD 1672
             RPI +FSEKL+  R RYS YD+EFYA+VRA+R W+HYL  REF +++DH+AL+Y+ +Q 
Sbjct: 307  GRPIEFFSEKLTDSRRRYSTYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQK 366

Query: 1671 SVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYAT 1492
             +S +HA W++FL +F F +K+KSG  N VADALSRR  ++S +   + GF+  +  Y++
Sbjct: 367  KLSNQHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSS 426

Query: 1491 DPYFNRILLQLNSGINGDFL---LVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVG 1330
            D YF++I+  L   +  + L   L + +LFKG QLC+P  SLR +II ELHG+G   H G
Sbjct: 427  DSYFSKIIADLQGSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFG 486

Query: 1329 RDRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMD 1150
            RD+++ +V   Y+WP +RRDV R V RC  C   KG+A N GLY PLP P  PW  +SMD
Sbjct: 487  RDKTLAMVADRYYWPKMRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMD 546

Query: 1149 FVMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVS 970
            FV+GLP+T +G+DSIFVVVDRFSKM HFIPC RT++A H+A+LFFREI R+HG+P+SIVS
Sbjct: 547  FVLGLPKTAKGFDSIFVVVDRFSKMAHFIPCFRTSNATHIAELFFREIVRLHGIPTSIVS 606

Query: 969  DRDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDS 790
            DRD +F+ HFWR+LWR   T+L +SS  HPQTDGQTEVVNRSLGN+LRCL+  N K+WD 
Sbjct: 607  DRDVKFMGHFWRTLWRKFGTELKYSSTCHPQTDGQTEVVNRSLGNMLRCLIQNNPKTWDL 666

Query: 789  RLSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLH 610
             + QAEFA+N++VNRS   +PF+  YG+ P+  LDL+ LP  AR           ++++H
Sbjct: 667  VIPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLVPLPQEARVSNEGELFADHIRKIH 726

Query: 609  AAAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEI 430
               ++ L AS+ +Y  TA+ HRR  +F+ G+ V   L ++R+P   Y+KL +RK GP ++
Sbjct: 727  EEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKV 786


>gb|KYP57132.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 839

 Score =  712 bits (1838), Expect = 0.0
 Identities = 362/717 (50%), Positives = 486/717 (67%), Gaps = 6/717 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MN +LR  IG  VVVYFDDILIYS+S  +H+DHLR VL +LR    FA   KC+F V
Sbjct: 83   MRLMNHALRDCIGKFVVVYFDDILIYSKSLSDHVDHLRQVLLVLRDNHLFANVDKCTFCV 142

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            + ++FLG+ +S  G+ +D  K++AIQ WP P +++ VRSFHGLASFYRRF+P+FS++ +P
Sbjct: 143  DNVIFLGFVVSKNGVHVDPEKIKAIQEWPIPTNVSEVRSFHGLASFYRRFVPNFSTLASP 202

Query: 2031 LTDCMRGKS-FTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L + ++    F W  + + AF+ +K KL+ AP+L LPDFS  FEL CDAS +GIGAVL Q
Sbjct: 203  LNELVKKDVVFEWKEKHNLAFQDLKHKLTQAPVLALPDFSKTFELECDASGLGIGAVLLQ 262

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
            G  PIAYFSEKL G  L Y  YD E YA+VRA++ W HYL  +EFV+ +DHE+LKY+  Q
Sbjct: 263  GGHPIAYFSEKLHGAALNYPTYDKELYALVRALQTWEHYLVTKEFVIHSDHESLKYLKGQ 322

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  +L+QF +VIK+K G  N VADALSRRH+L++ L   I GFD  +ELY 
Sbjct: 323  HKLNKRHAKWVEYLEQFPYVIKYKKGSTNVVADALSRRHVLLNTLGSQILGFDDIKELYE 382

Query: 1494 TDPYF-NRILLQLNSGINGDFLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGR 1327
             D  F N   L +     G + + +GFLFK  +LC+P  S+R  ++ E H  G   H G 
Sbjct: 383  KDLDFANFYSLCIQKPYQG-YYISEGFLFKENKLCIPQGSIRKLLVRESHEGGLMGHFGI 441

Query: 1326 DRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDF 1147
            ++++ L++  +FWP ++RDV R+ + C  C  AK T    GLY+PLPI S PW  ISMDF
Sbjct: 442  EKTLSLLREKFFWPHMKRDVQRFCSSCIACLQAKSTTKPHGLYTPLPISSSPWVDISMDF 501

Query: 1146 VMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSD 967
            ++GLPRTQRG DSIFVVVDRFSKM HFIPC +  DA ++A+LFF+EI R+HGLP +IVSD
Sbjct: 502  ILGLPRTQRGKDSIFVVVDRFSKMAHFIPCHKVDDASNIAKLFFQEIVRLHGLPKTIVSD 561

Query: 966  RDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSR 787
            RD +FLSHFW++LW  + T+L FS+  HPQTDGQTEVVNRSLG +LR ++  N KSWD  
Sbjct: 562  RDVKFLSHFWKTLWARLGTKLLFSTTCHPQTDGQTEVVNRSLGTMLRAILKGNKKSWDDY 621

Query: 786  LSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAE-LQRLH 610
            L   EFA+N  V++++  SPF++VYG  P  PLDL+ LP  A    +     AE +++LH
Sbjct: 622  LPHVEFAYNRVVHKTTNMSPFEIVYGFNPLTPLDLLPLPDVASFIHKEGTSRAEFVKKLH 681

Query: 609  AAAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEI 430
               + H+ + +EKY+  ++  R+ + FK G++VW  L KDR+ +   +KLS R  GP +I
Sbjct: 682  ERVRDHIQSQTEKYQKYSNKGRKEVVFKEGDWVWLHLRKDRFLSKRKSKLSPRGDGPFQI 741

Query: 429  VEKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINADSRANRVQGGEDDG 259
            + KIN+NAY L LPS    S  FNV  L  F G  ++ +E   D R N +Q G DDG
Sbjct: 742  LRKINNNAYVLDLPSEYGVSPSFNVSDLSLFTG-LATQEEAPLDLRTNPLQEGGDDG 797


>gb|KYP78758.1| Transposon Ty3-I Gag-Pol polyprotein, partial [Cajanus cajan]
          Length = 1060

 Score =  712 bits (1838), Expect = 0.0
 Identities = 362/717 (50%), Positives = 486/717 (67%), Gaps = 6/717 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MN +LR  IG  VVVYFDDILIYS+S  +H+DHLR V  +LR    FA   KC+F V
Sbjct: 306  MRLMNHALRDCIGKFVVVYFDDILIYSQSLSDHVDHLRQVFLVLRDNHLFANVDKCTFCV 365

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            + ++FLG+ +S  G+ +D  K++AIQ WP P +++ VRSFHGLASFYRRF+P+FS++ +P
Sbjct: 366  DNVIFLGFVVSKNGVHVDPEKIKAIQEWPIPTNVSEVRSFHGLASFYRRFVPNFSTLASP 425

Query: 2031 LTDCMRGKS-FTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L + ++    F W  + + AF+ +K KL+ AP+L LPDFS  FEL CDAS +GIGAVL Q
Sbjct: 426  LNELVKKDVVFEWKEKHNLAFQDLKHKLTQAPVLALPDFSKTFELECDASGLGIGAVLLQ 485

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
            G  PIAYFSEKL G  L Y  YD E YA+VRA++ W HYL  +EFV+ +DHE+LKY+  Q
Sbjct: 486  GGHPIAYFSEKLHGATLNYPTYDKELYALVRALQTWEHYLVTKEFVIHSDHESLKYLKGQ 545

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  +L+QF +VIK+K G  N VADALSRRH+L++ L   I GFD  +ELY 
Sbjct: 546  HKLNKRHAKWVEYLEQFPYVIKYKKGSTNVVADALSRRHVLLNTLGSQILGFDDIKELYE 605

Query: 1494 TDPYF-NRILLQLNSGINGDFLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGR 1327
             D  F N   L +     G + + +GFLFK  +LC+P  S+R  ++ E H  G   H G 
Sbjct: 606  KDLDFANFYSLCIQKPYQG-YYISEGFLFKENKLCIPQGSIRKLLVRESHEGGLMGHFGI 664

Query: 1326 DRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDF 1147
            ++++ L++  +FWP ++RDV R+ + C  C  AK T    GLY+PLPI S PW  ISMDF
Sbjct: 665  EKTLSLLREKFFWPHMKRDVQRFCSSCIACLQAKSTTKPHGLYTPLPISSSPWVDISMDF 724

Query: 1146 VMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSD 967
            ++GLPRTQRG DSIFVVVDRFSKM HFIPC +  DA ++A+LFF+EI R+HGLP +IVSD
Sbjct: 725  ILGLPRTQRGKDSIFVVVDRFSKMAHFIPCHKVDDASNIAKLFFQEIVRLHGLPKTIVSD 784

Query: 966  RDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSR 787
            RD +FLSHFW++LW  + T+L FS+  HPQTDGQTEVVNRSLG +LR ++  N KSWD  
Sbjct: 785  RDVKFLSHFWKTLWARLGTKLLFSTTCHPQTDGQTEVVNRSLGTMLRAILKGNKKSWDDY 844

Query: 786  LSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAE-LQRLH 610
            L   EFA+N  V++++  SPF++VYG  P  PLDL+ LP  A    +     AE +++LH
Sbjct: 845  LPHVEFAYNRVVHKTTNMSPFEIVYGFNPLTPLDLLPLPDVASFIHKEGTSRAEFVKKLH 904

Query: 609  AAAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEI 430
               + H+ + +EKY+   +  R+ + FK G++VW  L KDR+P+   +KLS R  GP +I
Sbjct: 905  ERVRDHIQSQTEKYQKYNNKGRKEVIFKEGDWVWLHLRKDRFPSKRKSKLSPRGDGPFQI 964

Query: 429  VEKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINADSRANRVQGGEDDG 259
            + KIN+NAY L LPS    S  FNV  L  F G  ++ +E   D R+N +Q G DDG
Sbjct: 965  LRKINNNAYVLDLPSEYGVSSSFNVSDLSLFTG-LATLEEDALDLRSNPLQEGGDDG 1020


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  727 bits (1876), Expect = 0.0
 Identities = 359/715 (50%), Positives = 491/715 (68%), Gaps = 5/715 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MN+ LRP IG  VVVYFDDILIYS+S  EH +HLRAV + LR  + F    KC+F  
Sbjct: 831  MRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCT 890

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            +R+ FLGY ++ QGI +D  KVEAIQSWPTP +++ VRSF GLA FY RF+  FS+I AP
Sbjct: 891  DRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYCRFVQDFSTIAAP 950

Query: 2031 LTDCMR-GKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L    + G  FTW T  ++AF ++K KL+ APLL LPDF+  FEL CDAS +G+G VL Q
Sbjct: 951  LNALTKKGVPFTWGTSQENAFHMLKHKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQ 1010

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
              + +AYFSEKLSGP L YS YD E YA+VR +  W+HYL+ +EFV+ +DHE+LK+I +Q
Sbjct: 1011 EGKLVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQ 1070

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  F++ F +VIKHK G  N +A+ALSRR+ L++ L   I G +T ++ YA
Sbjct: 1071 GKLNRRHAKWVEFIESFPYVIKHKKGKENIIANALSRRYTLLTQLDYKIFGLETIKDQYA 1130

Query: 1494 TDPYFNRILLQLNSGINGD-FLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGR 1327
             D  FN +LL    G   + F++ DGF+F+  +LC+P+SS+RL ++ E HG G   H G 
Sbjct: 1131 HDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGA 1190

Query: 1326 DRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDF 1147
             ++ +++   +FWP +RRDV R+VARC  C  AK      GLY PLP+P+ PW  ISMDF
Sbjct: 1191 KKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDF 1250

Query: 1146 VMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSD 967
            V+GLPRT+RG DSIFVVVDRFSKMVHFIPC +T DA H+A LFFREI R+HG+P++IVSD
Sbjct: 1251 VLGLPRTKRGRDSIFVVVDRFSKMVHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSD 1310

Query: 966  RDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSR 787
            RDT+FLSHFWR+LW  + T+L FS+  HPQTDGQ EVVNR+L  +LR ++ +N+K W+  
Sbjct: 1311 RDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQIEVVNRTLSTMLRAVLKKNIKMWEEC 1370

Query: 786  LSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHA 607
            L   EFA N +++ ++   PFQ+VY ++PR P+DL+ LPS+ + +  A      + +LH 
Sbjct: 1371 LPHIEFACNRSLHSTTKMCPFQIVYSLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHE 1430

Query: 606  AAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIV 427
              + ++   + KYK   D  RR ++F+ G+ VW  L K+R+P    +KL  R  GP +++
Sbjct: 1431 TTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVL 1490

Query: 426  EKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINADSRANRVQGGEDD 262
             KIN NAY++ LP+    S  FNV  L P++G+    DE+  +SR  ++Q GEDD
Sbjct: 1491 AKINENAYKIDLPADFGVSPTFNVADLKPYLGE---EDEL--ESRTTQMQEGEDD 1540


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  726 bits (1873), Expect = 0.0
 Identities = 353/717 (49%), Positives = 488/717 (68%), Gaps = 5/717 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MN+ LR  IG  VVVYFDDILIYS+S  EH+DH+RAV + LR  + F    KC+F  
Sbjct: 855  MRLMNEVLRAFIGKFVVVYFDDILIYSKSMDEHVDHMRAVFNALRDARLFGNLEKCTFCT 914

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            +R+ FLGY ++ QGI +D  KVEAI  WP P +IT VRSF GLA FYRRF+  FS+I AP
Sbjct: 915  DRVSFLGYVVTPQGIEVDQAKVEAIHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAP 974

Query: 2031 LTDCMR-GKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L +  + G  F+W    + AF ++K KL+ APLL LPDF+  FEL CDAS +G+G VL Q
Sbjct: 975  LNELTKKGVHFSWGKVQEHAFNVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQ 1034

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
              +P+AYFSEKLSG  L YS YD E YA+VR +  W+HYL+ +EFV+ +DHE+LK+I +Q
Sbjct: 1035 EGKPVAYFSEKLSGSVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQ 1094

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  F++ F +VIKHK G  N +ADALSRR+ L++ L   I G +T ++ Y 
Sbjct: 1095 GKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIKDQYV 1154

Query: 1494 TDPYFNRILLQLNSGINGD-FLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGR 1327
             D  F  +LL    G   + +++ DGF+F+  +LC+P+SS+RL ++ E HG G   H G 
Sbjct: 1155 HDADFKDVLLHCKDGKGWNKYIVSDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGA 1214

Query: 1326 DRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDF 1147
             ++ +++   +FWP +RRDV R VARC  C  AK      GLY PLP+PS PW  ISMDF
Sbjct: 1215 KKTEDILAGHFFWPKMRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDF 1274

Query: 1146 VMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSD 967
            V+GLPRT++G DS+FVVVDRFSKM HFIPC +T DA H+A LFFREI R+HG+P++IVSD
Sbjct: 1275 VLGLPRTRKGRDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSD 1334

Query: 966  RDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSR 787
            RD +FLSHFWR+LW  + T+L FS+  HPQTDGQTEVVNR+L  +LR ++ +N+K W+  
Sbjct: 1335 RDAKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDC 1394

Query: 786  LSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHA 607
            L   EFA+N +++ ++   PFQ+VYG++PR P+DL+ LPS+ + +  A      + +LH 
Sbjct: 1395 LPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHE 1454

Query: 606  AAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIV 427
              + ++   + +YK  +D  R+ I+F+ G+ VW  L K+R+P    +KL  R  GP +++
Sbjct: 1455 TTKENIERMNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVL 1514

Query: 426  EKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINADSRANRVQGGEDDGD 256
            EKIN NAYRL LP+    S  FN+  L P++G     +E+  +SR  ++Q GE+D D
Sbjct: 1515 EKINDNAYRLDLPADFGVSPTFNIADLKPYLG-----EEVELESRTTQMQEGENDED 1566


>gb|KYP77891.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
          Length = 797

 Score =  697 bits (1798), Expect = 0.0
 Identities = 347/717 (48%), Positives = 476/717 (66%), Gaps = 5/717 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MN  L+  +G CVVVYFDDILIYS +   H++HL AV+++LR EK FA   KC+F  
Sbjct: 83   MRLMNHVLKEFLGKCVVVYFDDILIYSTNFDLHVEHLSAVMNVLRKEKLFANIEKCTFCT 142

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            + ++FLG+ +S++G+++D  K+ AIQ WPTP +++ VRSFHGLASFYRRF+  FS++ AP
Sbjct: 143  DHVVFLGFVVSSKGVQVDEEKIRAIQEWPTPKNVSEVRSFHGLASFYRRFVKDFSTLAAP 202

Query: 2031 LTDCMRGK-SFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L + ++    F W  + + AF  +K KL+ AP+L LP+F+  FE+ CDAS VGIGAVL Q
Sbjct: 203  LNEIVKKHVGFKWGEKQEKAFSELKHKLTNAPILALPNFAKSFEIECDASNVGIGAVLMQ 262

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
               PIAYFSEKL+G  L Y  YD E YA+VRA+R W+HYL  +EFV+ +DHE+LKY+  Q
Sbjct: 263  EGHPIAYFSEKLNGAALNYPTYDKELYALVRALRTWQHYLLPKEFVIHSDHESLKYLKGQ 322

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  FL+QF +VIKHK G  N VADALSRRH L+S L   + G ++ +++Y 
Sbjct: 323  GKLNKRHAKWVEFLEQFPYVIKHKKGKGNVVADALSRRHNLLSMLETKLFGLESLKDMYM 382

Query: 1494 TDPYFNRILLQLNSGINGDFLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGRD 1324
             D  F              +   +GFLFK  +LCVP  S+R  +++E H  G   H G  
Sbjct: 383  HDVDFAENFAACEKFSENGYYRHNGFLFKANRLCVPKCSIRELLVSESHEGGLMGHFGVQ 442

Query: 1323 RSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDFV 1144
            +++E++Q  ++WP ++ DV ++   C +C  AK      GLY+PLP+P  PW  ISMDFV
Sbjct: 443  KTLEILQEHFYWPHMKHDVHKFCDHCIVCKKAKSKVKPHGLYTPLPVPDFPWIDISMDFV 502

Query: 1143 MGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSDR 964
            +GLPRT+ G DSIFVVVDRFSKM HFIPCK+  DA HVA LFFRE+ R+HGLP SIVSDR
Sbjct: 503  LGLPRTKNGKDSIFVVVDRFSKMAHFIPCKKVNDACHVADLFFREVVRLHGLPRSIVSDR 562

Query: 963  DTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSRL 784
            DT+FLSHFWR+LW  + T+L FS+  HPQTDGQTEVVNR+LG LLR ++ +N+K W+  L
Sbjct: 563  DTKFLSHFWRTLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLGTLLRTVLKKNIKFWEEHL 622

Query: 783  SQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAE-LQRLHA 607
               EFA+N AV+ ++  SPF++VYG  P  PLDL+ +P+ +    + A   AE +++LH 
Sbjct: 623  PHVEFAYNRAVHSTTKCSPFEIVYGFNPLTPLDLLPMPNISEFKHKDAQAKAEYVKKLHE 682

Query: 606  AAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIV 427
              ++ +    E Y   A+  R+ + F+ G++VW  + K+R+P    +KL  R  GP +++
Sbjct: 683  QVKAQIEKKIESYVKQANKGRKKVIFEPGDWVWVHMRKERFPEQRKSKLQPRGDGPFQVL 742

Query: 426  EKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINADSRANRVQGGEDDGD 256
            EKIN NAY++ LP     S  FNV  L  F     + DE  A  R N  Q GE+D D
Sbjct: 743  EKINDNAYKIDLPGEYGVSSSFNVADLTHF----DAGDEFIA-LRKNVAQEGENDVD 794


>emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]
          Length = 665

 Score =  692 bits (1785), Expect = 0.0
 Identities = 339/657 (51%), Positives = 465/657 (70%), Gaps = 6/657 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR MNQ L+P IG  +VVYFDDILIYS++E +H+ HLR V+ ILR EK +    K SF  
Sbjct: 21   MRFMNQVLQPFIGKFLVVYFDDILIYSKTEEDHVFHLRQVMRILRQEKLYINLKKYSFMT 80

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            + I+FLG+ +SA+G+ +D  KV+AI  WP P ++  +RSFHGL++FYRRFI  FS+IMAP
Sbjct: 81   SAIMFLGFVVSAKGLEVDPDKVKAIVEWPIPSTLQELRSFHGLSTFYRRFIISFSTIMAP 140

Query: 2031 LTDCMRGKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQG 1852
            +T   +            AF  IK +L+ AP+L LP+FS  FE++C+AS VGIG+VLSQ 
Sbjct: 141  ITGSTK------------AFEEIKERLTKAPVLQLPNFSKVFEVACNASNVGIGSVLSQE 188

Query: 1851 ARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQD 1672
              PIA+FS+KL+  + +YS YD EFY VV+ + +WRHYL   E VL++DHE LKY+++Q 
Sbjct: 189  GHPIAFFSKKLNEAKQKYSIYDKEFYIVVQXLCYWRHYLLPHESVLYSDHEPLKYVNSQK 248

Query: 1671 SVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYAT 1492
             ++  H  W +FLQ+++FVI+HKSG+ N+ A+ALS    ++S + I + GFD  +  Y +
Sbjct: 249  KLNHCHGKWXSFLQEYSFVIRHKSGVENKAANALSXVVYILSSMAIQVVGFDLLKRDYNS 308

Query: 1491 DPYFNRILLQLNSGING---DFLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVG 1330
               F+ I   L +G  G   +F L DG+LFKG  LC+   SLR ++I ELH  G   H G
Sbjct: 309  CKDFSIIYYALAAGTAGAYPNFXLHDGYLFKGTXLCLXDXSLREQVIWELHSRGXAXHFG 368

Query: 1329 RDRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMD 1150
            RD++I + +  ++WPSL+RDVT+ V++CR C  +KG   N GLY PLP+P +PW  +S+D
Sbjct: 369  RDKTIAMTEDHFYWPSLKRDVTKNVSKCRTCQPSKGRKKNTGLYMPLPVPHEPWQELSID 428

Query: 1149 FVMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVS 970
            FV+GLP+T R +DSIFV+VDRFSKMVHFIPC +T DA+HVA+LFF+EI R+HGLP +IVS
Sbjct: 429  FVLGLPKTFRRHDSIFVMVDRFSKMVHFIPCSKTLDAVHVAKLFFKEIVRLHGLPKTIVS 488

Query: 969  DRDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDS 790
            D+D +F+S+FWRSLW+M+NT+L FSSA+HPQT+GQTEVVNRSLG+LLRCLVGE++ +WD 
Sbjct: 489  DQDAKFMSYFWRSLWKMLNTKLKFSSAFHPQTEGQTEVVNRSLGDLLRCLVGEHVSNWDQ 548

Query: 789  RLSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLH 610
             L  AEFA+NS+VNRS+G SPF++V G++PR P+DL+ LP  ARP + A      +  LH
Sbjct: 549  ILPMAEFAYNSSVNRSTGHSPFEIVTGLLPRKPIDLVPLPMEARPSVEADAFSKHILDLH 608

Query: 609  AAAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGP 439
               Q  +  S+E YK  AD  R+  DFK  + V   +  +RYP  +Y KL ++ VGP
Sbjct: 609  KDVQRKIALSNENYKAQADLKRKVADFKERDMVMVWIRPERYPKGKYKKLHSKNVGP 665


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  741 bits (1914), Expect = 0.0
 Identities = 364/717 (50%), Positives = 495/717 (69%), Gaps = 5/717 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MN+ LRP IG  VVVYFDDILIYS+S  EH +HLRAV + LR  + F    KC+F  
Sbjct: 852  MRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCT 911

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            +R+ FLGY ++ QGI +D  KVEAIQSWPTP +++ VRSF GLA FYRRF+  FS+I AP
Sbjct: 912  DRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAP 971

Query: 2031 LTDCMR-GKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L    + G  FTW T  ++AF ++K KL+ APLL LPDF+  FEL CDAS +G+G VL Q
Sbjct: 972  LNVLTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQ 1031

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
              +P+AYFSEKLSGP L YS YD E YA+VR +  W+HYL+ +EFV+ +DHE+LK+I +Q
Sbjct: 1032 EGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQ 1091

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  F++ F +VIKHK G  N +ADALSRR+ L++ L   I G +T ++ YA
Sbjct: 1092 GKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIKDQYA 1151

Query: 1494 TDPYFNRILLQLNSGINGD-FLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGR 1327
             D  FN +LL    G   + F++ DGF+F+  +LC+P+SS+RL ++ E HG G   H G 
Sbjct: 1152 HDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGA 1211

Query: 1326 DRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDF 1147
             ++ +++   +FWP +RRDV R+VARC  C  AK      GLY PLP+P+ PW  ISMDF
Sbjct: 1212 KKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDF 1271

Query: 1146 VMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSD 967
            V+GLPRT+RG DSIFVVVDRFSKM HFIPC +T DA H+A LFFREI R+HG+P++IVSD
Sbjct: 1272 VLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSD 1331

Query: 966  RDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSR 787
            RDT+FLSHFWR+LW  + T+L FS+  HPQTDGQTEVVNR+L  +LR ++ +N+K W+  
Sbjct: 1332 RDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEEC 1391

Query: 786  LSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHA 607
            L   EFA+N +++ ++   PFQ+VYG++PR P+DL+ LPS+ + +  A      + +LH 
Sbjct: 1392 LPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHE 1451

Query: 606  AAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIV 427
              + ++   + KYK   D  RR + F+ G+ VW  L K+R+P    +KL  R  GP +++
Sbjct: 1452 TTKENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVL 1511

Query: 426  EKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINADSRANRVQGGEDDGD 256
             KIN NAY++ LP+    S  FNV  L P++G+    DE+  +SR  ++Q GEDD D
Sbjct: 1512 AKINENAYKIDLPADFGVSPTFNVADLKPYLGE---EDEL--ESRTTQMQEGEDDED 1563



 Score =  452 bits (1164), Expect = e-135
 Identities = 269/742 (36%), Positives = 399/742 (53%), Gaps = 44/742 (5%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            M +MN+     +   VVV+ DDIL+YS+SE +H  HLR VL  LR  + +A   KC F++
Sbjct: 1644 MNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVLGKLREHQLYAKLSKCEFWL 1703

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            + + FLG+ ISA+G+ +D   V A+  W  P ++T +RSF GLA +YRRFI +FS I  P
Sbjct: 1704 SEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARP 1763

Query: 2031 LTDCMRGKS-FTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            +T  ++ +  F W+ + + AF+ +K KL ++P+LILPD    F + CDAS  G+G VL Q
Sbjct: 1764 MTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRKDFMVYCDASPQGLGCVLMQ 1823

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
                +AY S +L      Y  +D+E  AVV A++ WRHYL      ++TDH++LKYI  Q
Sbjct: 1824 EGHVVAYASRQLWPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQ 1883

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRR-----------------HLLIS 1546
              ++ R   W   ++ +   I +  G  N VADALSR+                  +   
Sbjct: 1884 SDLNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRKSHCNTLGVRGIPPELNQQMEAL 1943

Query: 1545 DLRISIPGF-----------DTFRELYATDPYFNRILLQLNSGINGDFLLVD-GFLFKGI 1402
            +L I   GF           D  RE    DP    +L  +  G    F+  + G L+   
Sbjct: 1944 NLSIVSRGFLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQGKAAGFIEDEHGTLWNRN 2003

Query: 1401 QLCVPS-SSLRLKIIAELHGSG---HVGRDRSIELVQRSYFWPSLRRDVTRYVARCRICH 1234
            ++CVP    L+  I+ E H S    H G  +    ++  Y+W S++R++  +VA C +C 
Sbjct: 2004 RVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQ 2063

Query: 1233 IAKGTATN-AGLYSPLPIPSQPWACISMDFVMGLPRTQRGYDSIFVVVDRFSKMVHFIPC 1057
              K      AGL  PL +P   W  I MDF+ GLP+TQ GYDSI+VVVDR +K+  FIP 
Sbjct: 2064 RVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPV 2123

Query: 1056 KRTTDAIHVAQLFFREIYRIHGLPSSIVSDRDTRFLSHFWRSLWRMVNTQLNFSSAYHPQ 877
            K T     +A+L+F  I  +HG+P  IVSDR+++F SHFW+ L   + T+LNFS+AYHPQ
Sbjct: 2124 KTTYGGNKLAELYFARIVSLHGVPKKIVSDRESQFTSHFWKKLQEELGTRLNFSTAYHPQ 2183

Query: 876  TDGQTEVVNRSLGNLLRCLVGENLKSWDSRLSQAEFAHNSAVNRSSGFSPFQVVYGVIPR 697
            TDGQTE +N+ L ++L   V +  K+WD  L  AEF++N++   S   +P++ +YG   R
Sbjct: 2184 TDGQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFSYNNSYQASIQMAPYEALYGRKCR 2243

Query: 696  GPLDLIALPSTARPDLRAADLVAELQRLHAAAQSHLVASSEKYKVTADAHRRAIDFKVGE 517
             PL            +   D++ E +        +L  +  + K  AD  RR ++F V +
Sbjct: 2244 TPL---LWDQVGESQVFGTDILREAEAKVRTIWDNLKVAQSRQKSYADNRRRNLEFAVDD 2300

Query: 516  FVWAVLTKDRYPAHEY---NKLSARKVGPLEIVEKINSNAYRLKLPSHL-RTSDVFNVKH 349
            FV+  +T  R   H +    KL+ R VGP  I+ +    AY+L+LP+ L    DVF+V  
Sbjct: 2301 FVYLRVTPLR-GVHRFQTKGKLAPRFVGPFRIIARRGEVAYQLELPASLGNVHDVFHVSQ 2359

Query: 348  L-----IPFVGDNSSSDEINAD 298
            L     +P    +S   E+  D
Sbjct: 2360 LKKCLRVPSEQADSEQIEVRED 2381


>ref|XP_007206823.1| hypothetical protein PRUPE_ppa025991mg [Prunus persica]
            gi|462402465|gb|EMJ08022.1| hypothetical protein
            PRUPE_ppa025991mg [Prunus persica]
          Length = 1274

 Score =  711 bits (1836), Expect = 0.0
 Identities = 348/693 (50%), Positives = 478/693 (68%), Gaps = 6/693 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MRVM   LRP IG  +VVYFDDILIYSRS  EH+ HLR + S LR EK +A   KCSF  
Sbjct: 494  MRVMTHVLRPYIGKFLVVYFDDILIYSRSREEHIQHLRTIFSTLRKEKLYANLKKCSFLQ 553

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
             ++LFLG+ ISA G+  D  KVEAI +WPTP ++T  RSFHGL SFYRRFIP FS IMA 
Sbjct: 554  PQVLFLGFNISAAGVSTDPAKVEAIINWPTPTTLTEARSFHGLTSFYRRFIPGFSIIMAL 613

Query: 2031 LTDCMRGKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQG 1852
            +TDCM+  +F WT  A  AF ++K K++ AP+   PD +  FE++CDAS VGIG VLSQ 
Sbjct: 614  ITDCMKQGAFLWTHAAAKAFTILKQKMTQAPVFRHPDLTKVFEVTCDASGVGIGGVLSQE 673

Query: 1851 ARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQD 1672
              P+AYFSEKL+  + RYS +D EFY VV+A+R+W++YL   EFVL++DH+ALKY+ +Q 
Sbjct: 674  GHPVAYFSEKLNEAKQRYSTHDKEFYDVVQALRYWQYYLLPNEFVLYSDHQALKYLHSQR 733

Query: 1671 SVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYAT 1492
            ++S+                     I N+VADALSR   ++  + + + GFD  +  Y++
Sbjct: 734  TISS---------------------IDNKVADALSRVATILHTMTVQVNGFDRIKTEYSS 772

Query: 1491 DPYFNRILLQLNSGING---DFLLVDGFLFKGIQLCVPSSSLRLKIIAELHG---SGHVG 1330
             P F  I  ++++G      DF+  DGFLF+  QLC+P +SL   ++ ELHG   +GH G
Sbjct: 773  CPDFGIIFHEVSNGNRREYVDFITRDGFLFRRTQLCIPRTSLLEFLVWELHGGGLAGHFG 832

Query: 1329 RDRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMD 1150
            +D++I LV+  ++WPSL+RDV   +++CR C +AK    N G+Y+PLPIP  PW  +SMD
Sbjct: 833  KDKTIALVEDHFYWPSLKRDVAHLISQCRTCQLAKARKRNTGVYTPLPIPHAPWKDLSMD 892

Query: 1149 FVMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVS 970
            FV+GLP+T RGYDSIFV+VD FSKM HF+PC + TDA ++A+LFF+E+ R+HGL  SIVS
Sbjct: 893  FVLGLPKTSRGYDSIFVIVDCFSKMAHFLPCAKNTDASYMAKLFFKEVVRLHGLLVSIVS 952

Query: 969  DRDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDS 790
            DRD +F+S+FW++LW++  T L FSSA+HPQTDGQTEVVNRSLG+LL CLVG+   +WD 
Sbjct: 953  DRDFKFVSYFWKTLWKLFGTTLKFSSAFHPQTDGQTEVVNRSLGDLLHCLVGDKPGNWDL 1012

Query: 789  RLSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLH 610
             L  AEF +N++VNRS+G SPF+VV+G  PR P+DL+ALP  AR    A      +++LH
Sbjct: 1013 LLPVAEFTYNNSVNRSTGKSPFEVVHGFSPRSPVDLVALPVAARSSDSATSFAEHIRQLH 1072

Query: 609  AAAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEI 430
               +  +   ++ YK+ A+AHRR  +F+ G+FV   +  +R+P H + KL AR +GP  I
Sbjct: 1073 DDVRRQISMHTDTYKLAANAHRRQQEFREGDFVMVRVCPERFPKHSFKKLHARSMGPYRI 1132

Query: 429  VEKINSNAYRLKLPSHLRTSDVFNVKHLIPFVG 331
            ++K+ SNAY ++LP+++  S +FNV  L P+ G
Sbjct: 1133 IKKLGSNAYLIELPANMHISPIFNVSDLSPYRG 1165


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 889

 Score =  697 bits (1798), Expect = 0.0
 Identities = 341/679 (50%), Positives = 464/679 (68%), Gaps = 5/679 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MN+ LR  IG  VVVYFDDILIYSRS  +H  HLRAV   LR  + F    KC+F  
Sbjct: 193  MRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDARLFGNLEKCTFCT 252

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            +R+ FLGY ++ QGI +D  KVEAI SWP P +IT VRSF GLA FYR F+  FS+I AP
Sbjct: 253  DRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRHFVKDFSTIAAP 312

Query: 2031 LTDCM-RGKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L +   R  +FTW     +AF  +K KL+ APLL LPDF+  FEL CDAS +G+G VL Q
Sbjct: 313  LHELTKRNVTFTWAAAQRNAFDTLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQ 372

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
              +P+AYFSEKLSGP L YS YD E +A+VR +  W+HYL+ +EFV+ +DHE+LK+I +Q
Sbjct: 373  EGKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQ 432

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  F++ F +VIKHK G  N +ADALSRR+ ++S L   I G +T +E YA
Sbjct: 433  AKLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYA 492

Query: 1494 TDPYFNRILLQLNSGINGD-FLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGR 1327
             D  F  +LL    G   + F+L +GF+F+  +LC+P+SS+R+ ++ E HG G   H G 
Sbjct: 493  HDDDFKDVLLNCMEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGV 552

Query: 1326 DRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDF 1147
             ++ +++   +FWP +RRDV R+VARC  C  AK      GLY PLP+PS PW  ISMDF
Sbjct: 553  KKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDF 612

Query: 1146 VMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSD 967
            V+GLPRT++G DSIFVVVDRFSKM HFIPC ++ DA HVA LFFREI R+HG+P++IVSD
Sbjct: 613  VLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSD 672

Query: 966  RDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSR 787
            RDT+FLSHFWR+LW  + T+L FS+  HPQTDGQTEVVNR+L  +LR ++ +N+K W+  
Sbjct: 673  RDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEEC 732

Query: 786  LSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHA 607
            L   EFA+N + + ++   PF++VYG++PR P+DL+ LP++ R +  A      + +LH 
Sbjct: 733  LPHVEFAYNHSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKHRAELMLKLHE 792

Query: 606  AAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIV 427
              + ++   + KYK+     ++ + F+ G+ VW  L KDR+P    +KL  R  GP +++
Sbjct: 793  TTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLQPRADGPFKVL 852

Query: 426  EKINSNAYRLKLPSHLRTS 370
            +KIN NAY+L+LP+    S
Sbjct: 853  QKINDNAYKLELPADFGVS 871


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  718 bits (1854), Expect = 0.0
 Identities = 353/717 (49%), Positives = 486/717 (67%), Gaps = 5/717 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MN+ LR  IG  VVVYFDDILIYSRS  +HLDHLRAV + LR  + F    KC+F  
Sbjct: 911  MRLMNEVLRAFIGRFVVVYFDDILIYSRSLEDHLDHLRAVFTALRDARLFGNLGKCTFCT 970

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            +R+ FLGY ++ QGI +D  K+EAI+SWP P ++T VRSF G A FYRRF+  FS+I AP
Sbjct: 971  DRVSFLGYVVTPQGIEVDKAKIEAIESWPQPKTVTQVRSFLGXAGFYRRFVRDFSTIAAP 1030

Query: 2031 LTDCMRGK-SFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L +  +    ++W T  ++AF ++K KL+ APLL LPDF+  FEL CDAS +G+G VL Q
Sbjct: 1031 LNELTKKDVPYSWGTAQEEAFTVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQ 1090

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
              +P+AYFSEKLSGP L YS YD E YA+VR +  W+HYL+ +EFV+ +DHE+LK+I +Q
Sbjct: 1091 DGKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQ 1150

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  F++ F +VIKHK G  N +ADALSRR+ ++S L   I G +T ++ Y 
Sbjct: 1151 AKLNRRHAKWVEFIETFPYVIKHKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKDQYV 1210

Query: 1494 TDPYFNRILLQLNSGINGD-FLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGR 1327
             D  F  +L     G   + F++ +GF+F+  +LC+P+SS+RL ++ E HG G   H G 
Sbjct: 1211 HDADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMGHFGV 1270

Query: 1326 DRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDF 1147
             +  +++   +FWP +RRDV R+VARC  C  AK      GLY PLP+PS PW  ISMDF
Sbjct: 1271 KKMEDVLATHFFWPRMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDF 1330

Query: 1146 VMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSD 967
            V+GLPRT++G DSIFVVVDRFSKM HFIPC ++ DA +VA LFFREI R+HG+P++IVSD
Sbjct: 1331 VLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSD 1390

Query: 966  RDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSR 787
            RD +FLSHFWR LW  + T+L FS+  HPQTDGQTEVVNRSL  +LR ++  N+K W+  
Sbjct: 1391 RDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKNNIKLWEEC 1450

Query: 786  LSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHA 607
            L   EFA+N +++ ++   PF++VYG +PR P+DL+ +PS+ + +  A +    + ++H 
Sbjct: 1451 LPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHE 1510

Query: 606  AAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIV 427
              + ++   + +YK+  D  R+ + F  G+ VW  L KDR+P    +KL  R  GP +++
Sbjct: 1511 LTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVL 1570

Query: 426  EKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINADSRANRVQGGEDDGD 256
            EKIN NAYRL+LP+    S  FN+  L P++G+    DE+   SR   VQ GEDD D
Sbjct: 1571 EKINDNAYRLELPADFGVSPTFNIADLKPYLGE---EDEL--PSRTTSVQEGEDDED 1622


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  717 bits (1852), Expect = 0.0
 Identities = 360/739 (48%), Positives = 491/739 (66%), Gaps = 5/739 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MN+ LR  IG  VVVYFDDILIYS+S  EHL+HLRAV   LR  + F    KC+F  
Sbjct: 896  MRLMNEVLRAFIGRFVVVYFDDILIYSKSLEEHLEHLRAVFIALRDARLFGNLGKCTFCT 955

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            +R+ FLGY ++ QGI +D  K+EAI+SWP P ++T VRSF GLA FYRRF+  FS+I AP
Sbjct: 956  DRVSFLGYVVTPQGIEVDKAKIEAIESWPHPKTVTQVRSFLGLAGFYRRFVRDFSTIAAP 1015

Query: 2031 LTDCMRGK-SFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L +  +    F W T  ++AF ++K KL+ APLL LP+F+  FEL CDAS +G+G VL Q
Sbjct: 1016 LNEVTKKDVPFVWGTAQEEAFTVLKDKLTYAPLLQLPNFNKTFELECDASGIGLGGVLLQ 1075

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
              +P+AYFSEK SGP L YS YD E YA+VR +  W+HYL+ +EFV+ +DHE+LK+I +Q
Sbjct: 1076 DGKPVAYFSEKFSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQ 1135

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  F++ F +VIKHK G  N +ADALSRR+ ++S L   I G +T ++ Y 
Sbjct: 1136 AKLNRRHAKWVEFIETFPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLETIKDQYV 1195

Query: 1494 TDPYFNRILLQLNSGINGD-FLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGR 1327
             D  F  +L     G   + F+L DGF+F+  +LC+P+SS+RL ++ E HG G   H G 
Sbjct: 1196 HDAEFKDVLQNCKEGRTWNKFVLNDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGV 1255

Query: 1326 DRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDF 1147
             ++ +++   +FWP +RRDV R+VARC  C  AK      GLY PLP+PS PW  ISMDF
Sbjct: 1256 KKTEDILATHFFWPKMRRDVERFVARCTTCQRAKSRLNPHGLYMPLPVPSVPWEDISMDF 1315

Query: 1146 VMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSD 967
            V+GLPRT++G DSIFVVVDRFSKM HFIPC ++ DA++VA LFFREI R+HG+P++IVSD
Sbjct: 1316 VLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAVNVADLFFREIIRLHGVPNTIVSD 1375

Query: 966  RDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSR 787
            RDT+FLSHFWR LW  +  +L FS+  HPQTDGQTEVVNR+L  +LR ++  N K W+  
Sbjct: 1376 RDTKFLSHFWRCLWAKLGNKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKNNKKMWEEC 1435

Query: 786  LSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHA 607
            L   EFA+N +++ ++   PF++VYG +PR P+DL+ LPS+ + +  A +    + ++H 
Sbjct: 1436 LPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSELILKIHE 1495

Query: 606  AAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIV 427
              + ++   + KYK+  D  R+ + F  G+ VW  L KDR+P    +KL  R  GP +++
Sbjct: 1496 LTKENIERMNAKYKLARDKGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMPRADGPFKVL 1555

Query: 426  EKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINADSRANRVQGGEDDGDEIT 247
            EKIN NAY+L+LP+    S  FN+  L P++G+    DE+   SR    Q GEDD D   
Sbjct: 1556 EKINDNAYKLELPADFGVSPTFNIADLKPYLGE---EDEL--PSRTTSFQEGEDDED--- 1607

Query: 246  *VIWINTTHIPRQFTSTAT 190
                INT   P   T T T
Sbjct: 1608 ----INTIVTPTAPTVTYT 1622


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  717 bits (1851), Expect = 0.0
 Identities = 356/717 (49%), Positives = 487/717 (67%), Gaps = 5/717 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            +R+MN+ LR  IG  VVVYFDDILIYSRS  +H  HLRAV   LR E+ F    KC+F  
Sbjct: 880  IRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDERLFGNLEKCTFCT 939

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            +R+ FLGY ++ QGI +D  KVEAI SWP P +IT VRSF GLA FYRRF+  FS+I AP
Sbjct: 940  DRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAP 999

Query: 2031 LTDCM-RGKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L +   R  +FTW     +AF  +K KL+ APLL LPDF+  FEL CDAS +G+G VL Q
Sbjct: 1000 LHELTKRNVTFTWAAAQRNAFDTLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQ 1059

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
              +PI YFSEKLSGP L YS YD E +A+VR +  W+HYL+ +EFV+ +DHE+LK+I +Q
Sbjct: 1060 EGKPIEYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQ 1119

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  F++ F +VIKHK G  N +ADALSRR+ ++S L   I G +T +E YA
Sbjct: 1120 AKLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYA 1179

Query: 1494 TDPYFNRILLQLNSGINGD-FLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGR 1327
             D  F  +LL    G   + F+L +GF+F+  +LC+P+SS+R+ ++ E HG G   H G 
Sbjct: 1180 HDDDFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGV 1239

Query: 1326 DRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDF 1147
             ++ +++   +FWP +RRDV R+VARC  C  AK      GLY PLP+PS PW  ISMDF
Sbjct: 1240 KKTEDILADHFFWPKMRRDVERFVARCTTCQKAKLRLNPHGLYMPLPVPSVPWEDISMDF 1299

Query: 1146 VMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSD 967
            V+GLPRT++G DSIFVVVDRFSKM HFIPC ++ DA HVA LFFREI R+HG+P++IVSD
Sbjct: 1300 VLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSD 1359

Query: 966  RDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSR 787
            RDT+FLSHFWR+LW  + T+L FS+  HPQTDGQTEVVNR+L  +LR ++ +N+K W+  
Sbjct: 1360 RDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEEC 1419

Query: 786  LSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHA 607
            L   EFA+N + + ++   PF++VYG++PR P+DL+ LP++ R +  A      + +LH 
Sbjct: 1420 LPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYHAELMLKLHE 1479

Query: 606  AAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIV 427
              + ++   + KYK+     ++ + F+ G+ VW  L KDR+P    +KL  R  GP +++
Sbjct: 1480 TTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVL 1539

Query: 426  EKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINADSRANRVQGGEDDGD 256
            +KIN N Y+L+LP+    S  FN+  L P++G+    DE+  +SR  ++Q GEDD D
Sbjct: 1540 QKINDNTYKLELPADFGVSPTFNIADLKPYLGE---EDEL--ESRTTQMQEGEDDED 1591


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  716 bits (1849), Expect = 0.0
 Identities = 354/717 (49%), Positives = 485/717 (67%), Gaps = 5/717 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MN+ LR  IG  VVVYFDDILIYSRS  +HLDHLRAV + LR  + F    KC+F  
Sbjct: 908  MRLMNEVLRAFIGRFVVVYFDDILIYSRSLEDHLDHLRAVFTALRDARLFGNLGKCTFCT 967

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            +R+ FLGY ++ QGI +D  K+EAI+SWP P ++T VRSF GLA FYRRF+  FS+I AP
Sbjct: 968  DRVSFLGYVVTPQGIEVDKAKIEAIESWPQPKTVTQVRSFLGLAGFYRRFVRDFSTIAAP 1027

Query: 2031 LTDCMRGK-SFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L +  +    ++W T  ++AF ++K KL+ APLL LPDF+  FEL CDAS +G+G VL Q
Sbjct: 1028 LNELTKKDVPYSWGTAQEEAFTVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQ 1087

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
              +P+AYFSEKLSGP L YS YD E YA+VR +  W+HYL+ +EFV+ +DHE+LK+I +Q
Sbjct: 1088 DGKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQ 1147

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  F++ F +VIK K G  N +ADALSRR+ ++S L   I G +T ++ Y 
Sbjct: 1148 AKLNRRHAKWVEFIETFPYVIKDKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKDQYV 1207

Query: 1494 TDPYFNRILLQLNSGINGD-FLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGR 1327
             D  F  +L     G   + F++ +GF+F+  +LC+P+SS+RL ++ E HG G   H G 
Sbjct: 1208 HDADFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMGHFGV 1267

Query: 1326 DRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDF 1147
             +  +++   +FWP +RRDV R+VARC  C  AK      GLY PLP+PS PW  ISMDF
Sbjct: 1268 KKMEDVLATHFFWPRMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDF 1327

Query: 1146 VMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSD 967
            V+GLPRT++G DSIFVVVDRFSKM HFIPC ++ DA +VA LFFREI R+HG+P++IVSD
Sbjct: 1328 VLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSD 1387

Query: 966  RDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSR 787
            RD +FLSHFWR LW  + T+L FS+  HPQTDGQTEVVNRSL  +LR ++  NLK W+  
Sbjct: 1388 RDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEEC 1447

Query: 786  LSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHA 607
            L   EFA+N +++ ++   PF++VYG +PR P+DL+ +PS+ + +  A +    + ++H 
Sbjct: 1448 LPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHE 1507

Query: 606  AAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIV 427
              + ++   + +YK+  D  R+ + F  G+ VW  L KDR+P    +KL  R  GP +++
Sbjct: 1508 LTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVL 1567

Query: 426  EKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINADSRANRVQGGEDDGD 256
            EKIN NAYRL+LP     S  FN+  L P++G+    DE+   SR   VQ GEDD D
Sbjct: 1568 EKINDNAYRLELPXDFGVSPTFNIADLKPYLGE---EDEL--PSRTTSVQEGEDDED 1619


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  712 bits (1837), Expect = 0.0
 Identities = 352/717 (49%), Positives = 484/717 (67%), Gaps = 5/717 (0%)
 Frame = -1

Query: 2391 MRVMNQSLRPLIGTCVVVYFDDILIYSRSEPEHLDHLRAVLSILRTEKFFAAPHKCSFFV 2212
            MR+MN+ LR  IG  VVVYFDDILIYSRS  +H  HLRAV   LR  + F    KC+F  
Sbjct: 880  MRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHLRAVFDALRDARLFGNLEKCTFCT 939

Query: 2211 NRILFLGYEISAQGIRMDMTKVEAIQSWPTPHSITAVRSFHGLASFYRRFIPHFSSIMAP 2032
            +R+ FL Y ++ QGI +D  KVEAI +WP P +IT VRSF GLA FYRRF+  FS+I AP
Sbjct: 940  DRVSFLSYVVTPQGIEVDQAKVEAIHNWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAP 999

Query: 2031 LTDCM-RGKSFTWTTEADDAFRLIKSKLSTAPLLILPDFSLPFELSCDASKVGIGAVLSQ 1855
            L +   R  +FTW     +AF  +K KL+ APLL LPDF+  FE  CDAS +G+G VL Q
Sbjct: 1000 LHELTKRNVTFTWAAAQRNAFDTLKDKLTHAPLLQLPDFNKTFEHECDASGIGLGGVLLQ 1059

Query: 1854 GARPIAYFSEKLSGPRLRYSAYDMEFYAVVRAVRFWRHYLFQREFVLFTDHEALKYISNQ 1675
              +P+AYFSEKLSGP L YS YD E +A+VR +  W+HYL+ +EFV+ +DHE+LK+I +Q
Sbjct: 1060 EGKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQ 1119

Query: 1674 DSVSARHAGWAAFLQQFTFVIKHKSGILNRVADALSRRHLLISDLRISIPGFDTFRELYA 1495
              ++ RHA W  F++ F +VIKHK G  N +ADALSRR+ ++S L   I G +T +E YA
Sbjct: 1120 AKLNRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYA 1179

Query: 1494 TDPYFNRILLQLNSGINGD-FLLVDGFLFKGIQLCVPSSSLRLKIIAELHGSG---HVGR 1327
             D  F  +LL    G   + F+L +GF+F+  +LC+P+SS+R+ ++ E HG G   H G 
Sbjct: 1180 HDDDFKNVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGV 1239

Query: 1326 DRSIELVQRSYFWPSLRRDVTRYVARCRICHIAKGTATNAGLYSPLPIPSQPWACISMDF 1147
             ++ +++   +FWP +RRDV R+VARC  C  AK      GLY PLP+PS PW  ISMDF
Sbjct: 1240 KKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDF 1299

Query: 1146 VMGLPRTQRGYDSIFVVVDRFSKMVHFIPCKRTTDAIHVAQLFFREIYRIHGLPSSIVSD 967
            V+GLPRT++G DSIFVVVDRFSKM HFIPC ++ DA HVA LFFREI R+HG+P++IVSD
Sbjct: 1300 VLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSD 1359

Query: 966  RDTRFLSHFWRSLWRMVNTQLNFSSAYHPQTDGQTEVVNRSLGNLLRCLVGENLKSWDSR 787
            RDT+FLSHFWR+LW  + T+  FS+  HPQTDGQTEVVNR+L  +LR ++ +N+K W+  
Sbjct: 1360 RDTKFLSHFWRTLWAKLGTKFLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEEC 1419

Query: 786  LSQAEFAHNSAVNRSSGFSPFQVVYGVIPRGPLDLIALPSTARPDLRAADLVAELQRLHA 607
            L   EFA+N + + ++   PF++VYG++PR P+DL+  P++ R +  A      + +LH 
Sbjct: 1420 LPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPHPTSERVNFDAKYRAELMLKLHE 1479

Query: 606  AAQSHLVASSEKYKVTADAHRRAIDFKVGEFVWAVLTKDRYPAHEYNKLSARKVGPLEIV 427
              + ++   + KYK+     ++ + F+ G+ VW  L KDR+P    +KL  R  GP +++
Sbjct: 1480 TTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVL 1539

Query: 426  EKINSNAYRLKLPSHLRTSDVFNVKHLIPFVGDNSSSDEINADSRANRVQGGEDDGD 256
            +KIN NAY+L+LP+    S  FN+  L P++G+    DE+  +SR  ++Q GEDD D
Sbjct: 1540 QKINDNAYKLELPADFGVSPTFNIADLKPYLGE---EDEL--ESRTTQMQEGEDDED 1591