BLASTX nr result
ID: Rehmannia28_contig00029286
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00029286
(1061 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ALO61895.1| mediator of RNA polymerase II transcription subun... 176 3e-85
ref|XP_011072456.1| PREDICTED: mediator of RNA polymerase II tra... 163 3e-77
gb|EYU21430.1| hypothetical protein MIMGU_mgv1a009886mg [Erythra... 164 6e-76
ref|XP_012856290.1| PREDICTED: mediator of RNA polymerase II tra... 164 6e-76
ref|XP_009401441.1| PREDICTED: mediator of RNA polymerase II tra... 147 1e-67
emb|CDP21043.1| unnamed protein product [Coffea canephora] 144 4e-66
ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II tra... 147 1e-65
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera] 147 1e-65
ref|XP_011046101.1| PREDICTED: mediator of RNA polymerase II tra... 147 2e-65
gb|KHF98794.1| Putative mediator of RNA polymerase II transcript... 142 2e-65
ref|XP_009789537.1| PREDICTED: mediator of RNA polymerase II tra... 149 2e-65
ref|XP_010939752.1| PREDICTED: mediator of RNA polymerase II tra... 149 3e-65
ref|XP_008774994.1| PREDICTED: mediator of RNA polymerase II tra... 147 3e-65
emb|CBI36012.3| unnamed protein product [Vitis vinifera] 144 6e-65
ref|XP_006372643.1| RNA polymerase transcriptional regulation me... 147 1e-64
ref|XP_015059501.1| PREDICTED: mediator of RNA polymerase II tra... 150 2e-64
ref|XP_012455201.1| PREDICTED: mediator of RNA polymerase II tra... 142 3e-64
ref|XP_015889962.1| PREDICTED: mediator of RNA polymerase II tra... 149 8e-64
ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II tra... 145 2e-63
ref|XP_010033662.1| PREDICTED: mediator of RNA polymerase II tra... 139 4e-63
>gb|ALO61895.1| mediator of RNA polymerase II transcription subunit 6 [Rehmannia
glutinosa]
Length = 256
Score = 176 bits (446), Expect(2) = 3e-85
Identities = 92/109 (84%), Positives = 93/109 (85%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL
Sbjct: 148 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 207
Query: 657 XXXXXXXXXXXXXXXXTAEGDKSADTQQAEPLPPVDPIIDQGPSKRMKF 803
TAEGDKS+DTQQAEPLPPVDPIIDQGPSKRMKF
Sbjct: 208 PPAPPPPPFPDGYTPPTAEGDKSSDTQQAEPLPPVDPIIDQGPSKRMKF 256
Score = 168 bits (426), Expect(2) = 3e-85
Identities = 81/96 (84%), Positives = 81/96 (84%)
Frame = +2
Query: 137 NSTLDGVXXXXXXXXXXXXXXDMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNN 316
NS LDGV DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNN
Sbjct: 12 NSALDGVGPPAAAAAPPTPGTDMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNN 71
Query: 317 EQLRHRAIHPLDISHLSKMTGTEYMLSEVLEPHLFV 424
EQLRHRAIHPLDISHLSKMTGTEYMLSEVLEPHLFV
Sbjct: 72 EQLRHRAIHPLDISHLSKMTGTEYMLSEVLEPHLFV 107
>ref|XP_011072456.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Sesamum indicum]
Length = 254
Score = 163 bits (413), Expect(2) = 3e-77
Identities = 87/109 (79%), Positives = 89/109 (81%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAFNTAASKLEKIGYVDAENESTSSE KAAKETIDFKELKRVDHILASLQRKL
Sbjct: 146 RALYHISKAFNTAASKLEKIGYVDAENESTSSEPKAAKETIDFKELKRVDHILASLQRKL 205
Query: 657 XXXXXXXXXXXXXXXXTAEGDKSADTQQAEPLPPVDPIIDQGPSKRMKF 803
TAEG+KS+DTQQAEP VDPIIDQGPSKRMKF
Sbjct: 206 PPAPPPPPFPEGYAPPTAEGEKSSDTQQAEPQGAVDPIIDQGPSKRMKF 254
Score = 154 bits (390), Expect(2) = 3e-77
Identities = 72/75 (96%), Positives = 72/75 (96%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLR RAIHPLD SHLSKMTG
Sbjct: 31 DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRLRAIHPLDTSHLSKMTG 90
Query: 380 TEYMLSEVLEPHLFV 424
TEYMLSEVLEPHLFV
Sbjct: 91 TEYMLSEVLEPHLFV 105
>gb|EYU21430.1| hypothetical protein MIMGU_mgv1a009886mg [Erythranthe guttata]
Length = 328
Score = 164 bits (415), Expect(2) = 6e-76
Identities = 85/109 (77%), Positives = 90/109 (82%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAFNTAASKLEKIGYVDAENESTSSE KAAKETIDFKELKRVDHILASLQRKL
Sbjct: 218 RALYHISKAFNTAASKLEKIGYVDAENESTSSEPKAAKETIDFKELKRVDHILASLQRKL 277
Query: 657 XXXXXXXXXXXXXXXXTAEGDKSADTQQAEPLPPVDPIIDQGPSKRMKF 803
+ EG+KS+D+Q AEPLPPVDPIIDQGPSKR+KF
Sbjct: 278 PPAPPPPPFPDGYAPLSTEGEKSSDSQSAEPLPPVDPIIDQGPSKRIKF 326
Score = 149 bits (376), Expect(2) = 6e-76
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLR RA HPLD+SHLSKMTG
Sbjct: 103 DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRLRATHPLDLSHLSKMTG 162
Query: 380 TEYMLSEVLEPHLFV 424
EY LSEVLEPHLFV
Sbjct: 163 IEYSLSEVLEPHLFV 177
>ref|XP_012856290.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
isoform X2 [Erythranthe guttata]
Length = 260
Score = 164 bits (415), Expect(2) = 6e-76
Identities = 85/109 (77%), Positives = 90/109 (82%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAFNTAASKLEKIGYVDAENESTSSE KAAKETIDFKELKRVDHILASLQRKL
Sbjct: 150 RALYHISKAFNTAASKLEKIGYVDAENESTSSEPKAAKETIDFKELKRVDHILASLQRKL 209
Query: 657 XXXXXXXXXXXXXXXXTAEGDKSADTQQAEPLPPVDPIIDQGPSKRMKF 803
+ EG+KS+D+Q AEPLPPVDPIIDQGPSKR+KF
Sbjct: 210 PPAPPPPPFPDGYAPLSTEGEKSSDSQSAEPLPPVDPIIDQGPSKRIKF 258
Score = 149 bits (376), Expect(2) = 6e-76
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLR RA HPLD+SHLSKMTG
Sbjct: 35 DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRLRATHPLDLSHLSKMTG 94
Query: 380 TEYMLSEVLEPHLFV 424
EY LSEVLEPHLFV
Sbjct: 95 IEYSLSEVLEPHLFV 109
>ref|XP_009401441.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Musa acuminata subsp. malaccensis]
Length = 260
Score = 147 bits (372), Expect(2) = 1e-67
Identities = 67/75 (89%), Positives = 72/75 (96%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNL+FDYFALSPFYD+SCNNEQLR R+IHPLDISHLSKMTG
Sbjct: 35 DMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWSCNNEQLRARSIHPLDISHLSKMTG 94
Query: 380 TEYMLSEVLEPHLFV 424
TEY LSEV+EP+LFV
Sbjct: 95 TEYALSEVMEPNLFV 109
Score = 138 bits (348), Expect(2) = 1e-67
Identities = 74/110 (67%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAFNTAASKLEKIGY DAENE +S+E K+AKETID KELKRVDHILASLQRKL
Sbjct: 150 RALYHISKAFNTAASKLEKIGYADAENEESSAELKSAKETIDLKELKRVDHILASLQRKL 209
Query: 657 XXXXXXXXXXXXXXXXTAEGDKSADTQQA-EPLPPVDPIIDQGPSKRMKF 803
++ +K D+QQA E P VDPIIDQGP+KRMKF
Sbjct: 210 PPAPPPPPFPEGYAPSASDAEKGPDSQQASEQQPSVDPIIDQGPAKRMKF 259
>emb|CDP21043.1| unnamed protein product [Coffea canephora]
Length = 253
Score = 144 bits (363), Expect(2) = 4e-66
Identities = 65/75 (86%), Positives = 70/75 (93%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNLVFDYFALSPFY+++CNNEQLR R+IHPLD SHLSKMTG
Sbjct: 28 DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYEWTCNNEQLRLRSIHPLDASHLSKMTG 87
Query: 380 TEYMLSEVLEPHLFV 424
TEY LSE +EPHLFV
Sbjct: 88 TEYTLSEAMEPHLFV 102
Score = 136 bits (343), Expect(2) = 4e-66
Identities = 75/110 (68%), Positives = 85/110 (77%), Gaps = 2/110 (1%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAFNT ASKLEKIGYVDAENE+T+SE+KA+KETIDFKE+KRVDHILASLQRKL
Sbjct: 143 RALYHISKAFNTVASKLEKIGYVDAENETTASESKASKETIDFKEIKRVDHILASLQRKL 202
Query: 657 -XXXXXXXXXXXXXXXXTAEGDKSADTQQAE-PLPPVDPIIDQGPSKRMK 800
TAEG+K ++ QQAE +DPIIDQGPSKR+K
Sbjct: 203 PAAPPAPAFPEGYTPPTTAEGEKGSEDQQAELQTATLDPIIDQGPSKRVK 252
>ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Vitis vinifera]
Length = 258
Score = 147 bits (370), Expect(2) = 1e-65
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLN+YPLDRNLVFDYFALSPFYD++CNNEQLR R+IHPLD SHLSKMTG
Sbjct: 32 DMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTG 91
Query: 380 TEYMLSEVLEPHLFV 424
TEYML+EV+EPHLFV
Sbjct: 92 TEYMLNEVMEPHLFV 106
Score = 132 bits (332), Expect(2) = 1e-65
Identities = 76/112 (67%), Positives = 83/112 (74%), Gaps = 3/112 (2%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAF TAASKLEKIGYVDAENE+ + E+K KETIDFKE+ RVD ILASLQRKL
Sbjct: 147 RALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKL 206
Query: 657 -XXXXXXXXXXXXXXXXTAEGDKSADTQQ-AEP-LPPVDPIIDQGPSKRMKF 803
TAEG+K +TQQ AEP LP +DPIIDQGPSKRMKF
Sbjct: 207 PPAPPPPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 258
>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
Length = 253
Score = 147 bits (370), Expect(2) = 1e-65
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLN+YPLDRNLVFDYFALSPFYD++CNNEQLR R+IHPLD SHLSKMTG
Sbjct: 27 DMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTG 86
Query: 380 TEYMLSEVLEPHLFV 424
TEYML+EV+EPHLFV
Sbjct: 87 TEYMLNEVMEPHLFV 101
Score = 132 bits (332), Expect(2) = 1e-65
Identities = 76/112 (67%), Positives = 83/112 (74%), Gaps = 3/112 (2%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAF TAASKLEKIGYVDAENE+ + E+K KETIDFKE+ RVD ILASLQRKL
Sbjct: 142 RALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKL 201
Query: 657 -XXXXXXXXXXXXXXXXTAEGDKSADTQQ-AEP-LPPVDPIIDQGPSKRMKF 803
TAEG+K +TQQ AEP LP +DPIIDQGPSKRMKF
Sbjct: 202 PPAPPAPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 253
>ref|XP_011046101.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Populus euphratica] gi|743905404|ref|XP_011046103.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 6 [Populus euphratica]
Length = 259
Score = 147 bits (372), Expect(2) = 2e-65
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNLVFDYFALSPFYD++CNNEQLR ++IHPLD+SHL KMTG
Sbjct: 33 DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHLLKMTG 92
Query: 380 TEYMLSEVLEPHLFV 424
TEYMLSEV+EPHLFV
Sbjct: 93 TEYMLSEVMEPHLFV 107
Score = 131 bits (329), Expect(2) = 2e-65
Identities = 73/112 (65%), Positives = 82/112 (73%), Gaps = 3/112 (2%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALY+ISKAF TAASKLEKIGYVD+ENE +SE+K KE IDFKE+KR+DHILASLQRKL
Sbjct: 148 RALYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKL 207
Query: 657 -XXXXXXXXXXXXXXXXTAEGDKSADTQQ-AEP-LPPVDPIIDQGPSKRMKF 803
T E +K +TQQ EP LPPVDPIIDQGP+KRMKF
Sbjct: 208 PPAPPPPSFPEGYVPQSTTEEEKGPETQQGGEPQLPPVDPIIDQGPAKRMKF 259
>gb|KHF98794.1| Putative mediator of RNA polymerase II transcription subunit 6
[Gossypium arboreum]
Length = 256
Score = 142 bits (359), Expect(2) = 2e-65
Identities = 63/75 (84%), Positives = 71/75 (94%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNL+FDYFALSPFYD++CNNE+LR ++IHPLDIS LSKMTG
Sbjct: 31 DMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEKLRMQSIHPLDISQLSKMTG 90
Query: 380 TEYMLSEVLEPHLFV 424
EYMLSEV+EPHLF+
Sbjct: 91 IEYMLSEVMEPHLFI 105
Score = 135 bits (341), Expect(2) = 2e-65
Identities = 75/111 (67%), Positives = 80/111 (72%), Gaps = 2/111 (1%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALY+ISKAF TAASKLEKIGYVD ENES +SE K KE IDFKE+KRVDHILASLQRKL
Sbjct: 146 RALYYISKAFTTAASKLEKIGYVDTENESETSEPKGGKEAIDFKEVKRVDHILASLQRKL 205
Query: 657 XXXXXXXXXXXXXXXXTAEGDKSADTQQ-AEPLPP-VDPIIDQGPSKRMKF 803
T E DK + QQ AEP PP VDPIIDQGP+KRMKF
Sbjct: 206 PPAPPPPPFPDGFVPPTTEADKEPENQQTAEPQPPAVDPIIDQGPAKRMKF 256
>ref|XP_009789537.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Nicotiana sylvestris]
Length = 248
Score = 149 bits (377), Expect(2) = 2e-65
Identities = 68/75 (90%), Positives = 72/75 (96%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNLVFDYFALSPFYD++CNNEQLR RAIHPLDISHLSKMTG
Sbjct: 26 DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSRAIHPLDISHLSKMTG 85
Query: 380 TEYMLSEVLEPHLFV 424
+EY LSEV+EPHLFV
Sbjct: 86 SEYTLSEVMEPHLFV 100
Score = 129 bits (323), Expect(2) = 2e-65
Identities = 73/109 (66%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAF++AASKLEK GYV AENES +SE K AKETIDFKELKRVDHILASLQRKL
Sbjct: 141 RALYHISKAFSSAASKLEKTGYVAAENESEASEPKPAKETIDFKELKRVDHILASLQRKL 200
Query: 657 XXXXXXXXXXXXXXXXTAEGDKSADTQQAE-PLPPVDPIIDQGPSKRMK 800
+ ++++ QQAE LPPVDPIIDQGPSKRMK
Sbjct: 201 PPVPPPPPFPEGYAPPSTA--EASENQQAETQLPPVDPIIDQGPSKRMK 247
>ref|XP_010939752.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Elaeis guineensis]
Length = 260
Score = 149 bits (375), Expect(2) = 3e-65
Identities = 67/75 (89%), Positives = 72/75 (96%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNLVFDYFALSPFYD+SCNNEQLR R+IHPLD+SHLSKMTG
Sbjct: 33 DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTG 92
Query: 380 TEYMLSEVLEPHLFV 424
EY+LSEV+EPHLFV
Sbjct: 93 IEYVLSEVMEPHLFV 107
Score = 129 bits (324), Expect(2) = 3e-65
Identities = 72/112 (64%), Positives = 83/112 (74%), Gaps = 3/112 (2%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAFN AASKLEKIGY +AENE +SE+KAAKE ID KELKRVDHILASLQRKL
Sbjct: 148 RALYHISKAFNIAASKLEKIGYAEAENEDVNSESKAAKEAIDIKELKRVDHILASLQRKL 207
Query: 657 -XXXXXXXXXXXXXXXXTAEGDKSADTQQ-AEP-LPPVDPIIDQGPSKRMKF 803
++E +K + QQ AEP +PP+DPIIDQGP+KR+KF
Sbjct: 208 PPAPAPPPFPEGYLPPSSSEAEKGPEDQQTAEPQIPPMDPIIDQGPAKRIKF 259
>ref|XP_008774994.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Phoenix dactylifera]
Length = 260
Score = 147 bits (370), Expect(2) = 3e-65
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDR+LVFDYFALSPFYD+SCNNEQLR R+IHPLD+SHLSKMTG
Sbjct: 33 DMTGICFRDQLWLNTYPLDRSLVFDYFALSPFYDWSCNNEQLRSRSIHPLDLSHLSKMTG 92
Query: 380 TEYMLSEVLEPHLFV 424
EY+LSEV+EPHLFV
Sbjct: 93 IEYVLSEVMEPHLFV 107
Score = 130 bits (328), Expect(2) = 3e-65
Identities = 72/112 (64%), Positives = 85/112 (75%), Gaps = 3/112 (2%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAFNTA+SKLEKIGY +AENE T+SE+KAAKE ID KELKRVDHILASLQRKL
Sbjct: 148 RALYHISKAFNTASSKLEKIGYAEAENEDTNSESKAAKEAIDIKELKRVDHILASLQRKL 207
Query: 657 -XXXXXXXXXXXXXXXXTAEGDKSADTQQ-AEP-LPPVDPIIDQGPSKRMKF 803
++E +K + QQ A+P +PP+DPIIDQGP+KR+KF
Sbjct: 208 PPAPPPPPFPEGYAPPSSSEAEKGPEDQQTADPQVPPMDPIIDQGPAKRIKF 259
>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 144 bits (364), Expect(2) = 6e-65
Identities = 65/74 (87%), Positives = 71/74 (95%)
Frame = +2
Query: 203 MTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTGT 382
MT ICFRDQLWLN+YPLDRNLVFDYFALSPFYD++CNNEQLR R+IHPLD SHLSKMTGT
Sbjct: 1 MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGT 60
Query: 383 EYMLSEVLEPHLFV 424
EYML+EV+EPHLFV
Sbjct: 61 EYMLNEVMEPHLFV 74
Score = 132 bits (332), Expect(2) = 6e-65
Identities = 76/112 (67%), Positives = 83/112 (74%), Gaps = 3/112 (2%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAF TAASKLEKIGYVDAENE+ + E+K KETIDFKE+ RVD ILASLQRKL
Sbjct: 115 RALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKL 174
Query: 657 -XXXXXXXXXXXXXXXXTAEGDKSADTQQ-AEP-LPPVDPIIDQGPSKRMKF 803
TAEG+K +TQQ AEP LP +DPIIDQGPSKRMKF
Sbjct: 175 PPAPPPPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 226
>ref|XP_006372643.1| RNA polymerase transcriptional regulation mediator-related family
protein [Populus trichocarpa]
gi|550319272|gb|ERP50440.1| RNA polymerase
transcriptional regulation mediator-related family
protein [Populus trichocarpa]
Length = 259
Score = 147 bits (372), Expect(2) = 1e-64
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNLVFDYFALSPFYD++CNNEQLR ++IHPLD+SHL KMTG
Sbjct: 33 DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHLLKMTG 92
Query: 380 TEYMLSEVLEPHLFV 424
TEYMLSEV+EPHLFV
Sbjct: 93 TEYMLSEVMEPHLFV 107
Score = 128 bits (321), Expect(2) = 1e-64
Identities = 72/112 (64%), Positives = 81/112 (72%), Gaps = 3/112 (2%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALY+ISKAF TAASKLEKIGYVD+ENE +SE+K KE IDFKE+KR+DHILASLQRKL
Sbjct: 148 RALYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKL 207
Query: 657 -XXXXXXXXXXXXXXXXTAEGDKSADTQQ-AEP-LPPVDPIIDQGPSKRMKF 803
T E +K +TQQ EP LP VDPIIDQGP+KRMKF
Sbjct: 208 PPAPPPPSFPEGYVPQPTTEEEKGPETQQGGEPQLPSVDPIIDQGPAKRMKF 259
>ref|XP_015059501.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Solanum pennellii]
Length = 251
Score = 150 bits (380), Expect(2) = 2e-64
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNLVFDYFALSPFYD++CNNEQLR R+IHPLDISHLSKMTG
Sbjct: 29 DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSRSIHPLDISHLSKMTG 88
Query: 380 TEYMLSEVLEPHLFV 424
+EYMLSEV+EPHLFV
Sbjct: 89 SEYMLSEVMEPHLFV 103
Score = 124 bits (311), Expect(2) = 2e-64
Identities = 68/108 (62%), Positives = 77/108 (71%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAF+ A+SKLEK GYV +ENES +SE+KAAKETIDFKELKRVDHI AS QRKL
Sbjct: 144 RALYHISKAFSFASSKLEKTGYVASENESAASESKAAKETIDFKELKRVDHIFASQQRKL 203
Query: 657 XXXXXXXXXXXXXXXXTAEGDKSADTQQAEPLPPVDPIIDQGPSKRMK 800
+ + S + Q+ LPPVDPIIDQGPSKRMK
Sbjct: 204 PPVPPPPPFPEGYVPPST-AEASENQQEETQLPPVDPIIDQGPSKRMK 250
>ref|XP_012455201.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Gossypium raimondii] gi|763803424|gb|KJB70362.1|
hypothetical protein B456_011G069400 [Gossypium
raimondii] gi|763803426|gb|KJB70364.1| hypothetical
protein B456_011G069400 [Gossypium raimondii]
Length = 232
Score = 142 bits (359), Expect(2) = 3e-64
Identities = 63/75 (84%), Positives = 71/75 (94%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNL+FDYFALSPFYD++CNNE+LR ++IHPLDIS LSKMTG
Sbjct: 7 DMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEKLRMQSIHPLDISQLSKMTG 66
Query: 380 TEYMLSEVLEPHLFV 424
EYMLSEV+EPHLF+
Sbjct: 67 IEYMLSEVMEPHLFI 81
Score = 132 bits (331), Expect(2) = 3e-64
Identities = 73/111 (65%), Positives = 79/111 (71%), Gaps = 2/111 (1%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALY+ISKAF TAASKLEKIGY D ENES +SE K KETIDFKE+KRVDHILASLQRKL
Sbjct: 122 RALYYISKAFTTAASKLEKIGYGDTENESETSEPKGGKETIDFKEVKRVDHILASLQRKL 181
Query: 657 XXXXXXXXXXXXXXXXTAEGDKSADTQQ-AEPLPP-VDPIIDQGPSKRMKF 803
T E +K + QQ EP PP VDPIIDQGP+KRMKF
Sbjct: 182 PPAPPPPPFPDGFVPPTTEAEKEPENQQTTEPQPPAVDPIIDQGPAKRMKF 232
>ref|XP_015889962.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Ziziphus jujuba]
Length = 248
Score = 149 bits (376), Expect(2) = 8e-64
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLN+YPLDRNLVFDYFALSPFYD++CNNEQLR R+IHPLDISHLSKMTG
Sbjct: 22 DMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDISHLSKMTG 81
Query: 380 TEYMLSEVLEPHLFV 424
TEYML+EV+EPHLFV
Sbjct: 82 TEYMLNEVMEPHLFV 96
Score = 124 bits (310), Expect(2) = 8e-64
Identities = 70/112 (62%), Positives = 80/112 (71%), Gaps = 3/112 (2%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALY+ISKAF TAASKLEKIGYVD+ENES E+K KE IDFKE+KRVDHILASLQRKL
Sbjct: 137 RALYYISKAFTTAASKLEKIGYVDSENESVPLESKVGKEAIDFKEVKRVDHILASLQRKL 196
Query: 657 -XXXXXXXXXXXXXXXXTAEGDKSADTQQA-EP-LPPVDPIIDQGPSKRMKF 803
T E + + +TQQA EP P VDPI+DQGP+KRM+F
Sbjct: 197 PPAPPPPPFPDGYIPPPTTEAENAPETQQAGEPQQPTVDPIVDQGPAKRMRF 248
>ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Solanum tuberosum]
Length = 247
Score = 145 bits (365), Expect(2) = 2e-63
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYD++CNNEQLR RAIHPLD SH+SKMTG
Sbjct: 25 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRARAIHPLDFSHISKMTG 84
Query: 380 TEYMLSEVLEPHLFV 424
EY LSEV+EP+LFV
Sbjct: 85 MEYTLSEVMEPNLFV 99
Score = 126 bits (317), Expect(2) = 2e-63
Identities = 67/108 (62%), Positives = 76/108 (70%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALYHISKAF TA+SKLEKIGYV++EN+S +SETK AKE IDFKELKRVDHILASLQRKL
Sbjct: 140 RALYHISKAFGTASSKLEKIGYVESENDSQASETKPAKEAIDFKELKRVDHILASLQRKL 199
Query: 657 XXXXXXXXXXXXXXXXTAEGDKSADTQQAEPLPPVDPIIDQGPSKRMK 800
+ + +P PP+DPIIDQGPSKRMK
Sbjct: 200 PPVPPPPPFPEGYAPPSTSEPSENQQPETQP-PPIDPIIDQGPSKRMK 246
>ref|XP_010033662.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Eucalyptus grandis] gi|629087004|gb|KCW53361.1|
hypothetical protein EUGRSUZ_J02602 [Eucalyptus grandis]
Length = 254
Score = 139 bits (350), Expect(2) = 4e-63
Identities = 64/75 (85%), Positives = 69/75 (92%)
Frame = +2
Query: 200 DMTSICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRHRAIHPLDISHLSKMTG 379
DMT ICFRDQLWLNTYPLDRNLVFDYFALSPFYD++CNNEQLR R+IHPLD+ LSKMTG
Sbjct: 30 DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDFTCNNEQLRLRSIHPLDMPQLSKMTG 89
Query: 380 TEYMLSEVLEPHLFV 424
EY LSEVLEP+LFV
Sbjct: 90 IEYALSEVLEPNLFV 104
Score = 131 bits (330), Expect(2) = 4e-63
Identities = 68/110 (61%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Frame = +3
Query: 477 RALYHISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKL 656
RALY+ISKAF TAASKLEKIGYVD E+ES++S++K KETID KE+KR+DHILASLQR+L
Sbjct: 145 RALYYISKAFTTAASKLEKIGYVDGEDESSASDSKVPKETIDIKEVKRIDHILASLQRRL 204
Query: 657 XXXXXXXXXXXXXXXXTAEGDKSADTQQ-AEPLPPVDPIIDQGPSKRMKF 803
T E +K A+TQQ AE +P +DPIIDQGP+KR KF
Sbjct: 205 PPAPAPPPFPEGYAPSTTEAEKGAETQQAAESIPTIDPIIDQGPAKRTKF 254