BLASTX nr result

ID: Rehmannia28_contig00029262 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00029262
         (1371 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ELR53316.1| hypothetical protein M91_20998, partial [Bos mutus]     59   4e-06

>gb|ELR53316.1| hypothetical protein M91_20998, partial [Bos mutus]
          Length = 264

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
 Frame = -3

Query: 433 HVYTYILTYIHVCVCVYKYIYTWRFHTHSPCHTHAYIFVWCFCVSTNTYISGGFTIH*FM 254
           ++Y YI   I++CVC+Y YIYT   HTH   HTH YI+++     T+TYI     IH ++
Sbjct: 106 YIYMYICVCIYICVCIYIYIYT---HTHIYIHTHIYIYIY---THTHTYIYTHTHIHIYI 159

Query: 253 ACLMTAVI---VMDKLFDYHQSYKYCTHMMYLIIFCLSEL*IKSINYVKALYVFVH 95
                  I   +   ++ Y  +Y Y    +Y+ I+  + +   +  Y+   Y++ H
Sbjct: 160 YTHTHIYIHTHIYTYIYIYTHTYIYIHTHIYIYIYTHTHIYTHTHIYI---YIYTH 212


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