BLASTX nr result
ID: Rehmannia28_contig00029187
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00029187
(881 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011089039.1| PREDICTED: RNA polymerase sigma factor sigD,... 266 2e-83
ref|XP_012849780.1| PREDICTED: RNA polymerase sigma factor sigD,... 221 5e-66
ref|XP_012849779.1| PREDICTED: RNA polymerase sigma factor sigD,... 221 2e-65
emb|CDP17818.1| unnamed protein product [Coffea canephora] 174 7e-48
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 160 1e-43
ref|XP_010324734.1| PREDICTED: RNA polymerase sigma factor sigD,... 160 1e-43
ref|XP_010324732.1| PREDICTED: RNA polymerase sigma factor sigD,... 160 1e-43
ref|XP_015063095.1| PREDICTED: RNA polymerase sigma factor sigD,... 162 2e-43
ref|XP_010324724.1| PREDICTED: RNA polymerase sigma factor sigD,... 160 9e-43
ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD,... 160 2e-42
ref|XP_009612911.1| PREDICTED: RNA polymerase sigma factor sigD,... 159 3e-42
ref|XP_009783017.1| PREDICTED: RNA polymerase sigma factor sigD,... 159 4e-42
ref|XP_006345495.2| PREDICTED: RNA polymerase sigma factor sigD,... 157 9e-42
ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD,... 157 2e-41
ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Popu... 148 1e-39
ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Popu... 148 1e-39
ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Popu... 148 4e-39
ref|XP_011025492.1| PREDICTED: RNA polymerase sigma factor sigD,... 148 1e-38
ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus nota... 148 3e-38
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu... 148 3e-38
>ref|XP_011089039.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Sesamum
indicum]
Length = 446
Score = 266 bits (681), Expect = 2e-83
Identities = 160/288 (55%), Positives = 185/288 (64%), Gaps = 28/288 (9%)
Frame = -3
Query: 780 ICSCSKHXXXXXXXXXXXXSTDSYLKVSSYASPLAYTHS--------SVQEDALMISSG- 628
ICSCSK ST S+LKVSSY + YT S +VQEDA++I S
Sbjct: 3 ICSCSKQSPALPNISFPYYSTKSFLKVSSYNTLPTYTQSPCNHTCSYTVQEDAIIIHSAC 62
Query: 627 ----ELSGAAMASARKSEKILDRNGSENDVKNKEHYWCNEVTFXXXXXXXXRSILDCVNT 460
++ AA A A EK+LD GSEND K + +WCNEV R+ + V
Sbjct: 63 TQHLAVAAAAAAPAHDMEKLLDLKGSENDAK-RGRFWCNEVAVRRKRRRKLRTS-ERVKN 120
Query: 459 DEDEKFVFVDKKAGKSRFMTPKEEATFSWY-----------LKERARIEGVRTEM----G 325
DED K VFVDKK GKSRFMT KEEA FSW +ERARI V+TE+ G
Sbjct: 121 DEDGKLVFVDKKEGKSRFMTSKEEARFSWIHEDTNSLEYDLQQERARIVAVKTELLAETG 180
Query: 324 GQELSSNQWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLT 145
+E+SS+QWAKAAGISQ LD+ILCNGRES+E+ITS Y+RLVVS+ASSYQG+GL+LQDLT
Sbjct: 181 RREVSSSQWAKAAGISQRNLDRILCNGRESEERITSCYRRLVVSIASSYQGKGLSLQDLT 240
Query: 144 QEGSIGLLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
QEGSIGLLRGAIKFNPERG KLSTYAYWWIRQ IRLP
Sbjct: 241 QEGSIGLLRGAIKFNPERGYKLSTYAYWWIRQSITRAIANKSKIIRLP 288
>ref|XP_012849780.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X2 [Erythranthe guttata]
Length = 436
Score = 221 bits (563), Expect = 5e-66
Identities = 135/258 (52%), Positives = 163/258 (63%), Gaps = 20/258 (7%)
Frame = -3
Query: 714 SYLKVSSYAS----PLAYT--HSSVQEDALMISSGE--LSGAAMASARKSEKILDRNGSE 559
SYLK+ S + PL Y+ HSS + + E L G AS LD
Sbjct: 27 SYLKLISIYNLSNNPLLYSSPHSSSNYACVTVREEEDPLIGIETAS------FLDVKEER 80
Query: 558 NDVKNKEHYWCNEVTFXXXXXXXXR-SILDCVNTDEDE-----KFVFVDKKAGKSRFMTP 397
+EH+W N V R ++L+C+N D+D+ KF+F DK +GKSRFM P
Sbjct: 81 ESEVEREHFWRNGVAIRRKRRRRRRINLLECMNIDDDDDYQNHKFLFSDKNSGKSRFMNP 140
Query: 396 KEEATFSWYLKERARIEGVRTEMGGQ------ELSSNQWAKAAGISQHKLDKILCNGRES 235
KEEA FSW+L+ERARIE VRTE + ELSS QWA AAGISQ LD+I+ NG++S
Sbjct: 141 KEEAKFSWHLQERARIEAVRTEALAKMEEEEHELSSIQWANAAGISQKNLDRIIWNGKQS 200
Query: 234 QEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGLLRGAIKFNPERGNKLSTYAYWWI 55
+++IT SY RLVVSVASSYQG+GL+LQDLTQEGSIGLLRGAIKFNPE+G KLSTYAYWWI
Sbjct: 201 EKRITKSYLRLVVSVASSYQGKGLSLQDLTQEGSIGLLRGAIKFNPEKGYKLSTYAYWWI 260
Query: 54 RQXXXXXXXXXXXXIRLP 1
RQ IRLP
Sbjct: 261 RQAITRAITKKSKIIRLP 278
>ref|XP_012849779.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X1 [Erythranthe guttata]
Length = 487
Score = 221 bits (563), Expect = 2e-65
Identities = 135/258 (52%), Positives = 163/258 (63%), Gaps = 20/258 (7%)
Frame = -3
Query: 714 SYLKVSSYAS----PLAYT--HSSVQEDALMISSGE--LSGAAMASARKSEKILDRNGSE 559
SYLK+ S + PL Y+ HSS + + E L G AS LD
Sbjct: 27 SYLKLISIYNLSNNPLLYSSPHSSSNYACVTVREEEDPLIGIETAS------FLDVKEER 80
Query: 558 NDVKNKEHYWCNEVTFXXXXXXXXR-SILDCVNTDEDE-----KFVFVDKKAGKSRFMTP 397
+EH+W N V R ++L+C+N D+D+ KF+F DK +GKSRFM P
Sbjct: 81 ESEVEREHFWRNGVAIRRKRRRRRRINLLECMNIDDDDDYQNHKFLFSDKNSGKSRFMNP 140
Query: 396 KEEATFSWYLKERARIEGVRTEMGGQ------ELSSNQWAKAAGISQHKLDKILCNGRES 235
KEEA FSW+L+ERARIE VRTE + ELSS QWA AAGISQ LD+I+ NG++S
Sbjct: 141 KEEAKFSWHLQERARIEAVRTEALAKMEEEEHELSSIQWANAAGISQKNLDRIIWNGKQS 200
Query: 234 QEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGLLRGAIKFNPERGNKLSTYAYWWI 55
+++IT SY RLVVSVASSYQG+GL+LQDLTQEGSIGLLRGAIKFNPE+G KLSTYAYWWI
Sbjct: 201 EKRITKSYLRLVVSVASSYQGKGLSLQDLTQEGSIGLLRGAIKFNPEKGYKLSTYAYWWI 260
Query: 54 RQXXXXXXXXXXXXIRLP 1
RQ IRLP
Sbjct: 261 RQAITRAITKKSKIIRLP 278
>emb|CDP17818.1| unnamed protein product [Coffea canephora]
Length = 445
Score = 174 bits (441), Expect = 7e-48
Identities = 104/229 (45%), Positives = 138/229 (60%), Gaps = 5/229 (2%)
Frame = -3
Query: 672 THSSVQEDALMISSGELSGAAMASARKSEKILDRNGSENDVKNKEHYWCNEVTFXXXXXX 493
TH V L I + + + AA+ASA + E LD + D ++E W N V
Sbjct: 63 THEGV---TLTIDAAKAARAAVASAFEIENFLDFREWKKD--DEEKTWRNGVLMRRKRRR 117
Query: 492 XXRSILDCVNTDEDEKFVF--VDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EM 328
R + E+EK + K +++TPK+EA ++ LKE AR+E VR E
Sbjct: 118 KRRKAFS--ESLENEKVIMNVAIKPTNSGQYLTPKQEAEYTLCLKEEARVEAVRKRIEET 175
Query: 327 GGQELSSNQWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDL 148
E++ QWAKAAG+S++ LDK+LC+GRE+QE+IT Y+RLV+SVASSYQG+GL+LQDL
Sbjct: 176 TENEVTFAQWAKAAGMSKNSLDKVLCDGREAQERITRCYRRLVISVASSYQGKGLSLQDL 235
Query: 147 TQEGSIGLLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
QEG++GLL GA KFNPE+G KLSTY YWWIRQ RLP
Sbjct: 236 IQEGNLGLLHGAKKFNPEKGYKLSTYVYWWIRQAITKAIAKKSKITRLP 284
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 160 bits (404), Expect = 1e-43
Identities = 83/144 (57%), Positives = 101/144 (70%), Gaps = 3/144 (2%)
Frame = -3
Query: 423 AGKSRFMTPKEEATFSWYLKERARIEGVR---TEMGGQELSSNQWAKAAGISQHKLDKIL 253
A +S +TP+EEA F LKE A +E R E E +SNQWA+A GI + LDK+L
Sbjct: 17 AARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKML 76
Query: 252 CNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGLLRGAIKFNPERGNKLST 73
CNGRES+E+I SY+RLVVS+A+ YQG+GL+LQDL QEGSIGLLRGA +F+P+RG KLST
Sbjct: 77 CNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLST 136
Query: 72 YAYWWIRQXXXXXXXXXXXXIRLP 1
Y YWWIRQ IRLP
Sbjct: 137 YVYWWIRQAIVRAIANKSRIIRLP 160
>ref|XP_010324734.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X3 [Solanum lycopersicum]
Length = 340
Score = 160 bits (405), Expect = 1e-43
Identities = 88/161 (54%), Positives = 111/161 (68%), Gaps = 3/161 (1%)
Frame = -3
Query: 474 DCVNTDEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSN 304
+C+ ++++ +F K ++T KEEA +SWYLKE ARIE +R E +LSS
Sbjct: 104 ECLEMEKEDN-IFNLKPLKTGFYLTHKEEAKYSWYLKEEARIEILRKMVEETSEIDLSSK 162
Query: 303 QWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGL 124
Q AKAAG+S +LDK+L N +ESQ+KI Y+ LVVSVA+SYQG+GL+LQDL QEGSIGL
Sbjct: 163 QLAKAAGMSTRRLDKLLINAKESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGL 222
Query: 123 LRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
L GA KFNP++G KLSTYAYWWIRQ IRLP
Sbjct: 223 LHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLP 263
>ref|XP_010324732.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X2 [Solanum lycopersicum]
Length = 340
Score = 160 bits (405), Expect = 1e-43
Identities = 88/161 (54%), Positives = 111/161 (68%), Gaps = 3/161 (1%)
Frame = -3
Query: 474 DCVNTDEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSN 304
+C+ ++++ +F K ++T KEEA +SWYLKE ARIE +R E +LSS
Sbjct: 104 ECLEMEKEDN-IFNLKPLKTGFYLTHKEEAKYSWYLKEEARIEILRKMVEETSEIDLSSK 162
Query: 303 QWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGL 124
Q AKAAG+S +LDK+L N +ESQ+KI Y+ LVVSVA+SYQG+GL+LQDL QEGSIGL
Sbjct: 163 QLAKAAGMSTRRLDKLLINAKESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGL 222
Query: 123 LRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
L GA KFNP++G KLSTYAYWWIRQ IRLP
Sbjct: 223 LHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLP 263
>ref|XP_015063095.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Solanum
pennellii]
Length = 423
Score = 162 bits (410), Expect = 2e-43
Identities = 89/161 (55%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
Frame = -3
Query: 474 DCVNTDEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSN 304
+C+ ++++K +F K ++T KEEA +SWYLKE ARIE +R E +LSS
Sbjct: 104 ECLEMEKEDK-IFNLKPLKTGFYLTHKEEAKYSWYLKEEARIEILRKMVEETSEIDLSSK 162
Query: 303 QWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGL 124
Q AKAAG+S +LDK+L N +ESQ+KI Y+ LVVSVA+SYQG+GL+LQDL QEGSIGL
Sbjct: 163 QLAKAAGMSTRRLDKLLINAKESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGL 222
Query: 123 LRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
L GA KFNP++G KLSTYAYWWIRQ IRLP
Sbjct: 223 LHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLP 263
>ref|XP_010324724.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X1 [Solanum lycopersicum]
Length = 423
Score = 160 bits (405), Expect = 9e-43
Identities = 88/161 (54%), Positives = 111/161 (68%), Gaps = 3/161 (1%)
Frame = -3
Query: 474 DCVNTDEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSN 304
+C+ ++++ +F K ++T KEEA +SWYLKE ARIE +R E +LSS
Sbjct: 104 ECLEMEKEDN-IFNLKPLKTGFYLTHKEEAKYSWYLKEEARIEILRKMVEETSEIDLSSK 162
Query: 303 QWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGL 124
Q AKAAG+S +LDK+L N +ESQ+KI Y+ LVVSVA+SYQG+GL+LQDL QEGSIGL
Sbjct: 163 QLAKAAGMSTRRLDKLLINAKESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGL 222
Query: 123 LRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
L GA KFNP++G KLSTYAYWWIRQ IRLP
Sbjct: 223 LHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLP 263
>ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Vitis
vinifera]
Length = 442
Score = 160 bits (404), Expect = 2e-42
Identities = 83/144 (57%), Positives = 101/144 (70%), Gaps = 3/144 (2%)
Frame = -3
Query: 423 AGKSRFMTPKEEATFSWYLKERARIEGVR---TEMGGQELSSNQWAKAAGISQHKLDKIL 253
A +S +TP+EEA F LKE A +E R E E +SNQWA+A GI + LDK+L
Sbjct: 140 AARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKML 199
Query: 252 CNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGLLRGAIKFNPERGNKLST 73
CNGRES+E+I SY+RLVVS+A+ YQG+GL+LQDL QEGSIGLLRGA +F+P+RG KLST
Sbjct: 200 CNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLST 259
Query: 72 YAYWWIRQXXXXXXXXXXXXIRLP 1
Y YWWIRQ IRLP
Sbjct: 260 YVYWWIRQAIVRAIANKSRIIRLP 283
>ref|XP_009612911.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
[Nicotiana tomentosiformis]
Length = 416
Score = 159 bits (401), Expect = 3e-42
Identities = 86/155 (55%), Positives = 106/155 (68%), Gaps = 3/155 (1%)
Frame = -3
Query: 456 EDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSNQWAKAA 286
E E + + K ++T KEE+ +SWYLKE ARIE +R E EL+ NQ AKAA
Sbjct: 102 EKEDKISISKPVKTGLYLTLKEESEYSWYLKEEARIETLRKRVEETSEIELNPNQLAKAA 161
Query: 285 GISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGLLRGAIK 106
G+S+ +LDK+L N + SQ+KI Y+ LVVSVA+SYQG+GL+LQDL QEGSIGLL GA K
Sbjct: 162 GMSRRRLDKLLVNAKISQKKIIKCYRGLVVSVAASYQGKGLSLQDLIQEGSIGLLHGAKK 221
Query: 105 FNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
FNP++G KLSTYAYWWIRQ IRLP
Sbjct: 222 FNPKKGYKLSTYAYWWIRQAITRAIANKSRVIRLP 256
>ref|XP_009783017.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
[Nicotiana sylvestris]
Length = 426
Score = 159 bits (401), Expect = 4e-42
Identities = 85/161 (52%), Positives = 110/161 (68%), Gaps = 3/161 (1%)
Frame = -3
Query: 474 DCVNTDEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSN 304
+C++ D+ +K + + K ++T KEE+ +SWYLKE AR+E +R E E++ N
Sbjct: 107 ECLDMDKGDK-ISISKPVKTGLYLTLKEESEYSWYLKEEARMETLRKRVEETSEIEVNPN 165
Query: 303 QWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGL 124
Q AKAAG+S+ +LDK+L N + SQ+KI Y LVVSVA+SYQG+GL+LQDL QEGSIGL
Sbjct: 166 QLAKAAGMSRRRLDKVLINAKISQKKIIKCYTGLVVSVAASYQGKGLSLQDLIQEGSIGL 225
Query: 123 LRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
L GA KFNP +G KLSTYAYWWIRQ IRLP
Sbjct: 226 LHGAKKFNPNKGYKLSTYAYWWIRQAITRAIANKSRVIRLP 266
>ref|XP_006345495.2| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Solanum
tuberosum]
Length = 423
Score = 157 bits (398), Expect = 9e-42
Identities = 86/161 (53%), Positives = 110/161 (68%), Gaps = 3/161 (1%)
Frame = -3
Query: 474 DCVNTDEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSN 304
+C+ ++ ++ + K ++T +EEA +SWYLKE ARIE +R E +LSS
Sbjct: 104 ECLEMEKGDR-ILNSKPLKTGFYLTHEEEAKYSWYLKEEARIEILRKMVEETSEIDLSSK 162
Query: 303 QWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGL 124
Q AKAAG+S +LDK+L N +ESQ+KI Y+ LVVSVA+SYQG+GL+LQDL QEGSIGL
Sbjct: 163 QLAKAAGMSTQRLDKLLINAKESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGL 222
Query: 123 LRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
L GA KFNP++G KLSTYAYWWIRQ IRLP
Sbjct: 223 LHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLP 263
>ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Nelumbo
nucifera]
Length = 455
Score = 157 bits (397), Expect = 2e-41
Identities = 79/145 (54%), Positives = 101/145 (69%), Gaps = 3/145 (2%)
Frame = -3
Query: 426 KAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSNQWAKAAGISQHKLDKI 256
+ +S ++TPKEEA FS YLKE AR+E RT E E +S+QWA+AAG+ LDK+
Sbjct: 152 RPSRSMYLTPKEEAEFSLYLKEEARLEAARTRLRETNEHEPTSSQWAEAAGMRGATLDKM 211
Query: 255 LCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSIGLLRGAIKFNPERGNKLS 76
LC RES+E+I SY+RL+ S+AS YQG+GL+LQDL QEGSIGLLRG +F+P +G KLS
Sbjct: 212 LCQARESRERIVFSYRRLIFSIASGYQGKGLSLQDLIQEGSIGLLRGXERFDPRKGYKLS 271
Query: 75 TYAYWWIRQXXXXXXXXXXXXIRLP 1
TY YWWI+Q +RLP
Sbjct: 272 TYVYWWIKQAIIRAIASKSRMVRLP 296
>ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331143|gb|ERP56878.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 276
Score = 148 bits (374), Expect = 1e-39
Identities = 81/163 (49%), Positives = 109/163 (66%), Gaps = 3/163 (1%)
Frame = -3
Query: 480 ILDCVNTDEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--S 310
++D D ++ V ++ K +++PKEEA FS LK ARIE R +G QEL +
Sbjct: 101 VVDDGERDGGHEYKRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPT 160
Query: 309 SNQWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSI 130
S Q AKA + ++ +D +LC GRES+EKI SY+RLVVS+A+SYQ +GL+LQDL QEGSI
Sbjct: 161 SKQLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSI 220
Query: 129 GLLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
GLLRGA +F+P+RG KLSTY YWWI++ +RLP
Sbjct: 221 GLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMVRLP 263
>ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331144|gb|ERP56879.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 284
Score = 148 bits (374), Expect = 1e-39
Identities = 81/163 (49%), Positives = 109/163 (66%), Gaps = 3/163 (1%)
Frame = -3
Query: 480 ILDCVNTDEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--S 310
++D D ++ V ++ K +++PKEEA FS LK ARIE R +G QEL +
Sbjct: 101 VVDDGERDGGHEYKRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPT 160
Query: 309 SNQWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSI 130
S Q AKA + ++ +D +LC GRES+EKI SY+RLVVS+A+SYQ +GL+LQDL QEGSI
Sbjct: 161 SKQLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSI 220
Query: 129 GLLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
GLLRGA +F+P+RG KLSTY YWWI++ +RLP
Sbjct: 221 GLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMVRLP 263
>ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331142|gb|ERP56877.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 331
Score = 148 bits (374), Expect = 4e-39
Identities = 81/163 (49%), Positives = 109/163 (66%), Gaps = 3/163 (1%)
Frame = -3
Query: 480 ILDCVNTDEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--S 310
++D D ++ V ++ K +++PKEEA FS LK ARIE R +G QEL +
Sbjct: 101 VVDDGERDGGHEYKRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPT 160
Query: 309 SNQWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSI 130
S Q AKA + ++ +D +LC GRES+EKI SY+RLVVS+A+SYQ +GL+LQDL QEGSI
Sbjct: 161 SKQLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSI 220
Query: 129 GLLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
GLLRGA +F+P+RG KLSTY YWWI++ +RLP
Sbjct: 221 GLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMVRLP 263
>ref|XP_011025492.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X2 [Populus euphratica]
Length = 354
Score = 148 bits (373), Expect = 1e-38
Identities = 81/163 (49%), Positives = 109/163 (66%), Gaps = 3/163 (1%)
Frame = -3
Query: 480 ILDCVNTDEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--S 310
++D D ++ V ++ K +++PKEEA FS LK ARIE R +G QEL +
Sbjct: 101 VVDDGERDVGHEYRRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGDVQELDPT 160
Query: 309 SNQWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSI 130
S Q AKA + ++ +D +LC GRES+EKI SY+RLVVS+A+SYQ +GL+LQDL QEGSI
Sbjct: 161 SKQLAKALRMEKNTVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSI 220
Query: 129 GLLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
GLLRGA +F+P+RG KLSTY YWWI++ +RLP
Sbjct: 221 GLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMVRLP 263
>ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus notabilis]
gi|587907279|gb|EXB95293.1| RNA polymerase sigma factor
rpoD [Morus notabilis]
Length = 422
Score = 148 bits (374), Expect = 3e-38
Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 9/238 (3%)
Frame = -3
Query: 687 SPLAYTHSSVQEDALMISSG-ELSGAAMASARKSEKILDRNGSENDVKNKEHYWCNEVTF 511
SP + V DAL++++ E A A+A+ + L S +V + +E+T
Sbjct: 29 SPSKVGVNLVSNDALIVAAAAEAVTLARAAAKAARDALAEAASVGEVWSGNK--SSELTM 86
Query: 510 XXXXXXXXRSILDCVNTDE-----DEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIE 346
++ L+ ++TDE D +F K G +++P+EEA LKE A++E
Sbjct: 87 RRKKRKRGKT-LELLDTDEKSDGEDMRFSIGPMKLG---YLSPREEAECCLILKEGAKLE 142
Query: 345 GVRTEMGGQE---LSSNQWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQ 175
R M E +S + AKA G+ +DK+LC+ RESQE+I+ SY+RLVVSVA+ YQ
Sbjct: 143 ATRLRMTNSEDHEPTSKELAKAMGMEMRSIDKMLCDKRESQERISRSYRRLVVSVAAGYQ 202
Query: 174 GRGLNLQDLTQEGSIGLLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
G+GL+ DL QEGS+GLLRGA KF+P+RGNKLSTY YWWIRQ +RLP
Sbjct: 203 GKGLSFPDLIQEGSVGLLRGAQKFDPQRGNKLSTYVYWWIRQAIIRAIENKSRVVRLP 260
>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331146|gb|ERP56881.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 423
Score = 148 bits (374), Expect = 3e-38
Identities = 81/163 (49%), Positives = 109/163 (66%), Gaps = 3/163 (1%)
Frame = -3
Query: 480 ILDCVNTDEDEKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--S 310
++D D ++ V ++ K +++PKEEA FS LK ARIE R +G QEL +
Sbjct: 101 VVDDGERDGGHEYKRVILESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPT 160
Query: 309 SNQWAKAAGISQHKLDKILCNGRESQEKITSSYQRLVVSVASSYQGRGLNLQDLTQEGSI 130
S Q AKA + ++ +D +LC GRES+EKI SY+RLVVS+A+SYQ +GL+LQDL QEGSI
Sbjct: 161 SKQLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSI 220
Query: 129 GLLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLP 1
GLLRGA +F+P+RG KLSTY YWWI++ +RLP
Sbjct: 221 GLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMVRLP 263