BLASTX nr result

ID: Rehmannia28_contig00029047 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00029047
         (340 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012857367.1| PREDICTED: zinc finger protein VAR3, chlorop...   128   1e-32
ref|XP_011079114.1| PREDICTED: zinc finger protein VAR3, chlorop...   126   1e-31
ref|XP_011079113.1| PREDICTED: zinc finger protein VAR3, chlorop...   126   1e-31
ref|XP_011070189.1| PREDICTED: zinc finger protein VAR3, chlorop...   117   2e-28
ref|XP_011071757.1| PREDICTED: zinc finger protein VAR3, chlorop...   108   3e-25
gb|EPS73463.1| hypothetical protein M569_01294, partial [Genlise...    93   9e-21
emb|CDP17638.1| unnamed protein product [Coffea canephora]             74   3e-13
ref|XP_009794643.1| PREDICTED: zinc finger protein VAR3, chlorop...    60   2e-08
ref|XP_009589806.1| PREDICTED: zinc finger protein VAR3, chlorop...    59   4e-08
ref|XP_004229106.1| PREDICTED: zinc finger protein VAR3, chlorop...    57   2e-07
ref|XP_006337986.1| PREDICTED: zinc finger protein VAR3, chlorop...    55   2e-06
ref|XP_015060463.1| PREDICTED: zinc finger protein VAR3, chlorop...    54   3e-06

>ref|XP_012857367.1| PREDICTED: zinc finger protein VAR3, chloroplastic [Erythranthe
           guttata] gi|604301166|gb|EYU20886.1| hypothetical
           protein MIMGU_mgv1a003196mg [Erythranthe guttata]
          Length = 601

 Score =  128 bits (322), Expect = 1e-32
 Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
 Frame = +2

Query: 8   PRRLLTLSSPSKTKTQIPQLVN-CLHSQPSNSTYALHSSAAQQQQNHPWPEWTNFLNSLS 184
           P RLLTL  PSKTKT+   L+    HSQPSN+ + L +SAAQQQ +HPWPEW +FL+ LS
Sbjct: 36  PFRLLTLYPPSKTKTRTRLLLGKSFHSQPSNNAFTLPASAAQQQHHHPWPEWNHFLDLLS 95

Query: 185 NGQGFAVPEDHGIPTEDAFVVYEELTDDFVXXXXXXXXXXXXXPNLLGLLSR 340
           NGQGFA PE+ GIP EDAFVVYEELTDDFV             P+L+  LSR
Sbjct: 96  NGQGFASPENLGIPPEDAFVVYEELTDDFVAAASTCIAFARARPDLIRSLSR 147


>ref|XP_011079114.1| PREDICTED: zinc finger protein VAR3, chloroplastic isoform X2
           [Sesamum indicum]
          Length = 858

 Score =  126 bits (316), Expect = 1e-31
 Identities = 66/111 (59%), Positives = 76/111 (68%)
 Frame = +2

Query: 8   PRRLLTLSSPSKTKTQIPQLVNCLHSQPSNSTYALHSSAAQQQQNHPWPEWTNFLNSLSN 187
           P RLLTLSSP  TK   PQL+N  HSQ SN+TY L SSAAQ   +HPWPEWT+FL+ L +
Sbjct: 37  PVRLLTLSSPPNTKPPTPQLLNSFHSQSSNNTYTLSSSAAQ---HHPWPEWTHFLSVLPS 93

Query: 188 GQGFAVPEDHGIPTEDAFVVYEELTDDFVXXXXXXXXXXXXXPNLLGLLSR 340
           GQG + PE++ I  EDAFVVYEEL DDFV             PNLLGLLS+
Sbjct: 94  GQGASAPEEYRILPEDAFVVYEELPDDFVRAAATCLAFARARPNLLGLLSK 144


>ref|XP_011079113.1| PREDICTED: zinc finger protein VAR3, chloroplastic isoform X1
           [Sesamum indicum]
          Length = 888

 Score =  126 bits (316), Expect = 1e-31
 Identities = 66/111 (59%), Positives = 76/111 (68%)
 Frame = +2

Query: 8   PRRLLTLSSPSKTKTQIPQLVNCLHSQPSNSTYALHSSAAQQQQNHPWPEWTNFLNSLSN 187
           P RLLTLSSP  TK   PQL+N  HSQ SN+TY L SSAAQ   +HPWPEWT+FL+ L +
Sbjct: 37  PVRLLTLSSPPNTKPPTPQLLNSFHSQSSNNTYTLSSSAAQ---HHPWPEWTHFLSVLPS 93

Query: 188 GQGFAVPEDHGIPTEDAFVVYEELTDDFVXXXXXXXXXXXXXPNLLGLLSR 340
           GQG + PE++ I  EDAFVVYEEL DDFV             PNLLGLLS+
Sbjct: 94  GQGASAPEEYRILPEDAFVVYEELPDDFVRAAATCLAFARARPNLLGLLSK 144


>ref|XP_011070189.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Sesamum
           indicum]
          Length = 598

 Score =  117 bits (292), Expect = 2e-28
 Identities = 64/114 (56%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
 Frame = +2

Query: 5   NPRRLLTLSSPSKTKTQIPQLVNCLHSQPSNSTYALHSSAAQ--QQQNHPWPEWTNFLNS 178
           +P  + TLSS SKT++  PQ VN  HSQP N  Y LHSSAAQ  QQ +H W EW +FL  
Sbjct: 35  SPVSIFTLSSLSKTESHAPQSVNSFHSQPGNDAYLLHSSAAQIQQQHDHLWSEWRHFLQI 94

Query: 179 LSNGQGFAVPEDHGIPTEDAFVVYEELTDDFVXXXXXXXXXXXXXPNLLGLLSR 340
           LSNGQG  VP D+ I  EDAFVVYEEL DDFV             P+LL LLSR
Sbjct: 95  LSNGQGLHVPADNRILPEDAFVVYEELFDDFVRSAASCLAFARARPDLLRLLSR 148


>ref|XP_011071757.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Sesamum
           indicum]
          Length = 700

 Score =  108 bits (269), Expect = 3e-25
 Identities = 64/116 (55%), Positives = 74/116 (63%), Gaps = 4/116 (3%)
 Frame = +2

Query: 5   NPRRLLTLSSPSKTKTQIPQLVNCLHSQPSNSTYA--LHSSAAQQQQ--NHPWPEWTNFL 172
           +P  + TLSS SKT++  PQ VN  HSQ  N+ YA  LHSSAAQ QQ  +HPW EW +FL
Sbjct: 35  SPVSIFTLSSLSKTESHAPQSVNSFHSQLGNN-YACLLHSSAAQNQQQHDHPWSEWRHFL 93

Query: 173 NSLSNGQGFAVPEDHGIPTEDAFVVYEELTDDFVXXXXXXXXXXXXXPNLLGLLSR 340
             LSNGQG  VP D+GI  EDAFVVYEE+ DDFV              +LL LLSR
Sbjct: 94  QILSNGQGLHVPADNGILPEDAFVVYEEVLDDFVRSAASCLAFARARLDLLRLLSR 149


>gb|EPS73463.1| hypothetical protein M569_01294, partial [Genlisea aurea]
          Length = 294

 Score = 93.2 bits (230), Expect = 9e-21
 Identities = 51/109 (46%), Positives = 63/109 (57%)
 Frame = +2

Query: 14  RLLTLSSPSKTKTQIPQLVNCLHSQPSNSTYALHSSAAQQQQNHPWPEWTNFLNSLSNGQ 193
           RLL L SPS  + +   L+  +HSQP +S  +   ++      HPWPEWT FLNSLS   
Sbjct: 31  RLLALPSPSGARARSSPLLKSIHSQPLSSNTSYEYTSPAPPPPHPWPEWTYFLNSLSARW 90

Query: 194 GFAVPEDHGIPTEDAFVVYEELTDDFVXXXXXXXXXXXXXPNLLGLLSR 340
           G  VP+D+ IP ED FVVYEEL DDFV             P+LL +LSR
Sbjct: 91  G--VPDDYRIPLEDEFVVYEELPDDFVRVASSCIAFSRARPDLLRMLSR 137


>emb|CDP17638.1| unnamed protein product [Coffea canephora]
          Length = 495

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
 Frame = +2

Query: 14  RLLTLSSP---SKTKTQIPQLVNC---LHSQPSNSTYALHSSAAQQQQNHPWPEWTNFLN 175
           R LTLS+P   ++ +  +P   +C   LH+Q  N+       AA    NHPWPEW+N +N
Sbjct: 41  RRLTLSTPYSHTQRRLLLPTTKSCSRQLHAQRLNAPSISPYKAASAASNHPWPEWSNLIN 100

Query: 176 SLSNGQGFAVP--EDHGIPTEDAFVVYE--ELTDDFVXXXXXXXXXXXXXPNLLGLLSR 340
            L   Q    P  +D  +  EDAFVVYE  EL+++F+             PNLLGLLSR
Sbjct: 101 KLFFSQEKLSPGADDQKVHPEDAFVVYELKELSEEFIRCASLCLAFSRAHPNLLGLLSR 159


>ref|XP_009794643.1| PREDICTED: zinc finger protein VAR3, chloroplastic [Nicotiana
           sylvestris]
          Length = 878

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = +2

Query: 80  HSQPSNSTYALHSSAAQQQQNHPWPEWTNFLNSLS-NGQGFAVPEDHGIPTEDAFVVYEE 256
           H+QP N      +S++    +HPWPEW +F++ L+ NGQ    P       ED+FV YEE
Sbjct: 64  HAQPININNNPLNSSSSCFTSHPWPEWCSFISVLTANGQ--LAPA-----VEDSFVAYEE 116

Query: 257 LTDDFVXXXXXXXXXXXXXPNLLGLLSR 340
           L+DDFV             PNL+G LSR
Sbjct: 117 LSDDFVRAASVCLTFARERPNLIGSLSR 144


>ref|XP_009589806.1| PREDICTED: zinc finger protein VAR3, chloroplastic [Nicotiana
           tomentosiformis]
          Length = 866

 Score = 59.3 bits (142), Expect = 4e-08
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
 Frame = +2

Query: 80  HSQPSNSTYALHSSAAQQQQNHPWPEWTNFLNSLS-NGQGFAVPEDHGIPTEDAFVVYEE 256
           H+QP N++    +S++    +HPWPEW +F++ L+ NGQ    P       ED+FV YEE
Sbjct: 64  HAQPINNSNNPLNSSSSCFISHPWPEWCSFISVLTANGQ--LAPA-----VEDSFVAYEE 116

Query: 257 LTDDFVXXXXXXXXXXXXXPNLLGLLSR 340
           L+DDFV             P+L+G LSR
Sbjct: 117 LSDDFVRAASVCLTFARERPDLIGSLSR 144


>ref|XP_004229106.1| PREDICTED: zinc finger protein VAR3, chloroplastic [Solanum
           lycopersicum]
          Length = 874

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = +2

Query: 80  HSQPSNSTYALHSSAAQQQ-QNHPWPEWTNFLNSLS-NGQGFAVPEDHGIPTEDAFVVYE 253
           H+QP N+   L SS++     +HPWPEW + +  L+ N Q     ED      D+FV YE
Sbjct: 57  HAQPINNNTPLDSSSSSSSFTSHPWPEWRSLITLLTGNDQLPPAVED-----SDSFVTYE 111

Query: 254 ELTDDFVXXXXXXXXXXXXXPNLLGLLSR 340
           EL+ DF+             PN +GLLSR
Sbjct: 112 ELSQDFLRAATLCLDFARERPNFIGLLSR 140


>ref|XP_006337986.1| PREDICTED: zinc finger protein VAR3, chloroplastic [Solanum
           tuberosum]
          Length = 869

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 30/87 (34%), Positives = 43/87 (49%)
 Frame = +2

Query: 80  HSQPSNSTYALHSSAAQQQQNHPWPEWTNFLNSLSNGQGFAVPEDHGIPTEDAFVVYEEL 259
           H+QP N+   L SS++    +HPWPEW + +  L+               ED+FV YE+L
Sbjct: 57  HAQPINNNTPLDSSSSFT--SHPWPEWRSLITLLTGNDQLPPA------VEDSFVAYEDL 108

Query: 260 TDDFVXXXXXXXXXXXXXPNLLGLLSR 340
           + DF+             PN +GLLSR
Sbjct: 109 SQDFLRAATLCLDFAQERPNFIGLLSR 135


>ref|XP_015060463.1| PREDICTED: zinc finger protein VAR3, chloroplastic [Solanum
           pennellii]
          Length = 872

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +2

Query: 80  HSQPSNSTYALHSSAAQQQQNHPWPEWTNFLNSLS-NGQGFAVPEDHGIPTEDAFVVYEE 256
           H+QP N+   L S ++    +HPWPEW + +  L+ N Q     ED      D+FV YEE
Sbjct: 57  HAQPINNNTPLDSFSSSFT-SHPWPEWRSLITLLTGNDQLPPAVED-----SDSFVTYEE 110

Query: 257 LTDDFVXXXXXXXXXXXXXPNLLGLLSR 340
           L+ DF+             PN +GLLSR
Sbjct: 111 LSQDFLRAATLCLDFARERPNFIGLLSR 138


Top