BLASTX nr result
ID: Rehmannia28_contig00028268
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00028268
(325 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011090491.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 105 2e-24
gb|KDO61266.1| hypothetical protein CISIN_1g042717mg, partial [C... 104 3e-24
ref|XP_006470603.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 104 3e-24
ref|XP_002282827.2| PREDICTED: mitochondrial tRNA-specific 2-thi... 102 2e-23
ref|XP_007209892.1| hypothetical protein PRUPE_ppa004048mg [Prun... 102 3e-23
ref|XP_008238179.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 100 8e-23
ref|XP_010673635.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 97 8e-22
ref|XP_007015042.1| Transferases,tRNA-methyltransferases [Theobr... 98 9e-22
ref|XP_008449720.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 98 1e-21
ref|XP_010102337.1| tRNA-specific 2-thiouridylase mnmA [Morus no... 98 1e-21
ref|XP_015389250.1| PREDICTED: uncharacterized protein LOC107174... 93 2e-21
ref|XP_010673633.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 97 2e-21
ref|XP_010257320.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 97 3e-21
gb|KDO44892.1| hypothetical protein CISIN_1g0484031mg, partial [... 93 4e-21
ref|XP_015875896.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 96 5e-21
ref|XP_015875895.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 96 5e-21
ref|XP_015875893.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 96 5e-21
gb|KCW87153.1| hypothetical protein EUGRSUZ_B03681 [Eucalyptus g... 95 5e-21
ref|XP_010045015.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 95 7e-21
ref|XP_010045014.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 95 8e-21
>ref|XP_011090491.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Sesamum
indicum]
Length = 604
Score = 105 bits (263), Expect = 2e-24
Identities = 56/76 (73%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIA--XXXXX 151
FAAFY ESTCIGSGVILESWDDQGFPVCA+ALEIA+MEDKSKLGKPVKIKVIA
Sbjct: 438 FAAFYQESTCIGSGVILESWDDQGFPVCARALEIARMEDKSKLGKPVKIKVIAQSRDEES 497
Query: 150 XXXXXXECNLTSVGCE 103
+ NLTSV E
Sbjct: 498 DQNESLKLNLTSVNSE 513
>gb|KDO61266.1| hypothetical protein CISIN_1g042717mg, partial [Citrus sinensis]
Length = 474
Score = 104 bits (260), Expect = 3e-24
Identities = 56/109 (51%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKV---IAXXXX 154
FAAFY + CIGSGVILESWDDQGFPVC KALEIA+MEDKSKLGKP+KIKV
Sbjct: 365 FAAFYQGTRCIGSGVILESWDDQGFPVCEKALEIARMEDKSKLGKPIKIKVKPETPEEFN 424
Query: 153 XXXXXXXECNLTSVGCETAAPSEMVSQNVVRSNYPLKWLKQLVDKLTQV 7
NL + A S SQ S +P+ WL++L +K ++
Sbjct: 425 SNKGVQSSRNLVNAQNSIAEKSNTTSQEEAISRFPMNWLQKLREKWPRI 473
>ref|XP_006470603.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA [Citrus sinensis]
Length = 525
Score = 104 bits (260), Expect = 3e-24
Identities = 56/109 (51%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKV---IAXXXX 154
FAAFY + CIGSGVILESWDDQGFPVC KALEIA+MEDKSKLGKP+KIKV
Sbjct: 416 FAAFYQGTRCIGSGVILESWDDQGFPVCEKALEIARMEDKSKLGKPIKIKVKPETPEEFN 475
Query: 153 XXXXXXXECNLTSVGCETAAPSEMVSQNVVRSNYPLKWLKQLVDKLTQV 7
NL + A S SQ S +P+ WL++L +K ++
Sbjct: 476 SNKGVQSSRNLVNAQNSIAEKSNTTSQEEAISRFPMNWLQKLREKWPRI 524
>ref|XP_002282827.2| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Vitis
vinifera] gi|297746327|emb|CBI16383.3| unnamed protein
product [Vitis vinifera]
Length = 544
Score = 102 bits (255), Expect = 2e-23
Identities = 56/110 (50%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIAXXXXXXX 145
F AFY +CIGSGVILESWDDQGFPVCAKALEIA+MEDKSKLGKPVKIKV
Sbjct: 434 FTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPETPPKGS 493
Query: 144 XXXXECNLTS--VGCETAAPSEM--VSQNVVRSNYPLKWLKQLVDKLTQV 7
L + A E+ S+ RS +P+ WL+++ +K Q+
Sbjct: 494 DQIDGIKLDRELANSQAAVTDEISRSSEGEARSRFPMNWLQKIREKWLQM 543
>ref|XP_007209892.1| hypothetical protein PRUPE_ppa004048mg [Prunus persica]
gi|462405627|gb|EMJ11091.1| hypothetical protein
PRUPE_ppa004048mg [Prunus persica]
Length = 533
Score = 102 bits (253), Expect = 3e-23
Identities = 55/111 (49%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIAXXXXXXX 145
FAAFY TC+GSGVILESWDDQGFPVCA+ALEIA+MEDKS LGKPVKIKV
Sbjct: 423 FAAFYQGRTCLGSGVILESWDDQGFPVCARALEIARMEDKSLLGKPVKIKVKPENPITES 482
Query: 144 XXXXEC----NLTSVGCETAAPSEMVSQNVVRSNYPLKWLKQLVDKLTQVF 4
L G A VSQ + +P+ WL++ +K ++F
Sbjct: 483 DQVDGMELCRGLKHSGISAAKQRMQVSQGEAITRFPVNWLQKFREKWLRIF 533
>ref|XP_008238179.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1
[Prunus mume]
Length = 537
Score = 100 bits (250), Expect = 8e-23
Identities = 54/111 (48%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIAXXXXXXX 145
FAAFY TC+GSGVILESWDDQGFPVCA+ALEIA+MEDKS LG+PVKIKV
Sbjct: 427 FAAFYQGRTCLGSGVILESWDDQGFPVCARALEIARMEDKSLLGRPVKIKVKPENPITES 486
Query: 144 XXXXECNLTS----VGCETAAPSEMVSQNVVRSNYPLKWLKQLVDKLTQVF 4
L G A VSQ + +P+ WL++ +K +F
Sbjct: 487 DQVDGMELCGGLKHSGISAAKQRMQVSQGEAITRFPVNWLQKFREKWLHIF 537
>ref|XP_010673635.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X3
[Beta vulgaris subsp. vulgaris]
Length = 378
Score = 97.1 bits (240), Expect = 8e-22
Identities = 52/107 (48%), Positives = 66/107 (61%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIAXXXXXXX 145
FAAFY CIGSGVILE WDD+GFPVC KALEIA+MEDKSKLGKPVKIKV
Sbjct: 276 FAAFYQGKMCIGSGVILEFWDDEGFPVCEKALEIARMEDKSKLGKPVKIKVKPEGPDVGT 335
Query: 144 XXXXECNLTSVGCETAAPSEMVSQNVVRSNYPLKWLKQLVDKLTQVF 4
N S+ +A+ + ++ V + W++Q+ K+ Q+F
Sbjct: 336 NE----NNGSIHPSSASSKRVDAEEEVTDSLSPNWMQQVKQKILQLF 378
>ref|XP_007015042.1| Transferases,tRNA-methyltransferases [Theobroma cacao]
gi|508785405|gb|EOY32661.1|
Transferases,tRNA-methyltransferases [Theobroma cacao]
Length = 1075
Score = 98.2 bits (243), Expect = 9e-22
Identities = 47/53 (88%), Positives = 48/53 (90%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIA 166
FAAFY TCIGSGVILESWDDQGFPVCAKALEIA+MEDKSKLGKPVKIK A
Sbjct: 1001 FAAFYEGQTCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKAKA 1053
>ref|XP_008449720.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Cucumis
melo]
Length = 539
Score = 97.8 bits (242), Expect = 1e-21
Identities = 56/111 (50%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIAXXXXXXX 145
FAAFY +CIGSGVILESWDDQGFPVC KA+E A+MEDKSKLGKP+KIKV
Sbjct: 429 FAAFYKGRSCIGSGVILESWDDQGFPVCQKAIENAQMEDKSKLGKPIKIKVKPDSGMNES 488
Query: 144 XXXXECNL--TSVGCETAAPSEM--VSQNVVRSNYPLKWLKQLVDKLTQVF 4
+ + S E +M VS + + P+KWL L KL Q+F
Sbjct: 489 KAKDDTKIQDKSRNEEATVVEQMRKVSPDEAMATTPMKWLGSLRKKLLQIF 539
>ref|XP_010102337.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis]
gi|587905107|gb|EXB93298.1| tRNA-specific
2-thiouridylase mnmA [Morus notabilis]
Length = 580
Score = 97.8 bits (242), Expect = 1e-21
Identities = 52/107 (48%), Positives = 66/107 (61%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIAXXXXXXX 145
FAAFY +C+GSG+ILESWDDQGFPVC KALEIAKMEDKS LGKPVKIKV
Sbjct: 476 FAAFYQGKSCLGSGIILESWDDQGFPVCEKALEIAKMEDKSLLGKPVKIKVKPESPTIEP 535
Query: 144 XXXXECNLTSVGCETAAPSEMVSQNVVRSNYPLKWLKQLVDKLTQVF 4
L + ++ Q ++P+KWL++L +K ++F
Sbjct: 536 GQKSSTELDR--GQRSSHIAAAKQGRQALSFPMKWLQRLREKWFRIF 580
>ref|XP_015389250.1| PREDICTED: uncharacterized protein LOC107174296 [Citrus sinensis]
Length = 199
Score = 92.8 bits (229), Expect = 2e-21
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKV 172
FAAFY C+GSGVILE+WDDQGFPVC KALEIA+MEDKSKLGKPVKIKV
Sbjct: 73 FAAFYQGRRCLGSGVILEAWDDQGFPVCKKALEIARMEDKSKLGKPVKIKV 123
>ref|XP_010673633.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1
[Beta vulgaris subsp. vulgaris]
gi|870863324|gb|KMT14488.1| hypothetical protein
BVRB_4g072600 [Beta vulgaris subsp. vulgaris]
Length = 534
Score = 97.1 bits (240), Expect = 2e-21
Identities = 52/107 (48%), Positives = 66/107 (61%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIAXXXXXXX 145
FAAFY CIGSGVILE WDD+GFPVC KALEIA+MEDKSKLGKPVKIKV
Sbjct: 432 FAAFYQGKMCIGSGVILEFWDDEGFPVCEKALEIARMEDKSKLGKPVKIKVKPEGPDVGT 491
Query: 144 XXXXECNLTSVGCETAAPSEMVSQNVVRSNYPLKWLKQLVDKLTQVF 4
N S+ +A+ + ++ V + W++Q+ K+ Q+F
Sbjct: 492 NE----NNGSIHPSSASSKRVDAEEEVTDSLSPNWMQQVKQKILQLF 534
>ref|XP_010257320.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Nelumbo nucifera]
Length = 531
Score = 96.7 bits (239), Expect = 3e-21
Identities = 58/111 (52%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIAXXXXXXX 145
FAAFY TCIGSGVILE WD QGFPVCAKAL+IA+MEDKSKLGKPVKIKV
Sbjct: 425 FAAFYQGKTCIGSGVILECWDSQGFPVCAKALQIARMEDKSKLGKPVKIKVNPENSLKSS 484
Query: 144 XXXXECNLT--SVGCE--TAAPSEMVSQNVVRSNYPLKWLKQLVDKLTQVF 4
+ L S+ E T S+ SQ + N W ++L +K QVF
Sbjct: 485 EITDKVELNGKSLNSEDITLDKSKQSSQGIFNVN----WFQKLREKWLQVF 531
>gb|KDO44892.1| hypothetical protein CISIN_1g0484031mg, partial [Citrus sinensis]
Length = 235
Score = 92.8 bits (229), Expect = 4e-21
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKV 172
FAAFY C+GSGVILE+WDDQGFPVC KALEIA+MEDKSKLGKPVKIKV
Sbjct: 123 FAAFYQGRRCLGSGVILEAWDDQGFPVCKKALEIARMEDKSKLGKPVKIKV 173
>ref|XP_015875896.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA isoform X3 [Ziziphus
jujuba]
Length = 519
Score = 95.9 bits (237), Expect = 5e-21
Identities = 54/108 (50%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIAXXXXXXX 145
FAAFY TC+GSG+ILESWDDQGFPVCAKALEIA+MEDKS LGKPVKIKV
Sbjct: 407 FAAFYQGKTCLGSGIILESWDDQGFPVCAKALEIARMEDKSLLGKPVKIKVKPEKTHFME 466
Query: 144 XXXXECNLTSVGCETAAPSEMV------SQNVVRSNYPLKWLKQLVDK 19
+ G + + S + SQ V S +P+K L++ +K
Sbjct: 467 ANQKGVIELNRGQSSRSASAAIKQRSQASQGEVISRFPMKLLQKFRNK 514
>ref|XP_015875895.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA isoform X2 [Ziziphus
jujuba]
Length = 527
Score = 95.9 bits (237), Expect = 5e-21
Identities = 54/108 (50%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIAXXXXXXX 145
FAAFY TC+GSG+ILESWDDQGFPVCAKALEIA+MEDKS LGKPVKIKV
Sbjct: 415 FAAFYQGKTCLGSGIILESWDDQGFPVCAKALEIARMEDKSLLGKPVKIKVKPEKTHFME 474
Query: 144 XXXXECNLTSVGCETAAPSEMV------SQNVVRSNYPLKWLKQLVDK 19
+ G + + S + SQ V S +P+K L++ +K
Sbjct: 475 ANQKGVIELNRGQSSRSASAAIKQRSQASQGEVISRFPMKLLQKFRNK 522
>ref|XP_015875893.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA isoform X1 [Ziziphus
jujuba]
Length = 537
Score = 95.9 bits (237), Expect = 5e-21
Identities = 54/108 (50%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKVIAXXXXXXX 145
FAAFY TC+GSG+ILESWDDQGFPVCAKALEIA+MEDKS LGKPVKIKV
Sbjct: 425 FAAFYQGKTCLGSGIILESWDDQGFPVCAKALEIARMEDKSLLGKPVKIKVKPEKTHFME 484
Query: 144 XXXXECNLTSVGCETAAPSEMV------SQNVVRSNYPLKWLKQLVDK 19
+ G + + S + SQ V S +P+K L++ +K
Sbjct: 485 ANQKGVIELNRGQSSRSASAAIKQRSQASQGEVISRFPMKLLQKFRNK 532
>gb|KCW87153.1| hypothetical protein EUGRSUZ_B03681 [Eucalyptus grandis]
Length = 408
Score = 95.1 bits (235), Expect = 5e-21
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKV 172
F AFY + TCIGSGVILESW+DQGFPVC KALEIA+MEDKSKLGKPVKIKV
Sbjct: 351 FTAFYQDRTCIGSGVILESWNDQGFPVCQKALEIARMEDKSKLGKPVKIKV 401
>ref|XP_010045015.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2
[Eucalyptus grandis]
Length = 467
Score = 95.1 bits (235), Expect = 7e-21
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKV 172
F AFY + TCIGSGVILESW+DQGFPVC KALEIA+MEDKSKLGKPVKIKV
Sbjct: 410 FTAFYQDRTCIGSGVILESWNDQGFPVCQKALEIARMEDKSKLGKPVKIKV 460
>ref|XP_010045014.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1
[Eucalyptus grandis]
Length = 495
Score = 95.1 bits (235), Expect = 8e-21
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = -2
Query: 324 FAAFYHESTCIGSGVILESWDDQGFPVCAKALEIAKMEDKSKLGKPVKIKV 172
F AFY + TCIGSGVILESW+DQGFPVC KALEIA+MEDKSKLGKPVKIKV
Sbjct: 438 FTAFYQDRTCIGSGVILESWNDQGFPVCQKALEIARMEDKSKLGKPVKIKV 488