BLASTX nr result

ID: Rehmannia28_contig00026912 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00026912
         (317 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP17911.1| unnamed protein product [Coffea canephora]             70   7e-12
ref|XP_015064433.1| PREDICTED: F-box/kelch-repeat protein At3g23...    60   2e-08
ref|XP_004233113.2| PREDICTED: F-box/kelch-repeat protein At3g23...    59   4e-08
ref|XP_009799847.1| PREDICTED: F-box/kelch-repeat protein At3g23...    58   8e-08
ref|XP_009762231.1| PREDICTED: F-box protein At3g08750-like [Nic...    55   7e-07
ref|XP_009627941.1| PREDICTED: F-box/kelch-repeat protein At3g23...    54   2e-06

>emb|CDP17911.1| unnamed protein product [Coffea canephora]
          Length = 419

 Score = 69.7 bits (169), Expect = 7e-12
 Identities = 39/100 (39%), Positives = 54/100 (54%)
 Frame = +3

Query: 12  LVCTIDNERVKSVDGWVFDDGEQIWRKNYTFGPIEVNMDRLLWCSKNGKILGERADGKLF 191
           LV +   ER   VD  V+D+G+  W      GPI + M+R + CSK+G IL E  +G LF
Sbjct: 302 LVYSPTRERDDFVDVVVYDEGKGRWDTKSCHGPIGLKMERHMQCSKDGVILAETPEGTLF 361

Query: 192 VFDPKTGCVKFLFYAARRPQSFRINRYAESLSYMKGMRQV 311
           ++DP T  +K    A     S+    Y ESL  +KGM +V
Sbjct: 362 LYDPVTNAIKEFRIAEAMKTSYEAFSYTESLVSLKGMEKV 401


>ref|XP_015064433.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           pennellii]
          Length = 426

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3   LGGLVCTIDNERVKS--VDGWVFDDGEQIWRKNYTFGPIEVNMDRLLWCSKNGKILGERA 176
           L G +C +D +      +D WV DD +  W K Y+ GP+ V  DR+L C +NG I+ +  
Sbjct: 291 LEGSLCMLDWDHKDDCHMDVWVMDDVDG-WSKKYSVGPL-VGFDRILGCLRNGDIVAKNE 348

Query: 177 DGKLFVFDPKTGCVKFLFYAAR-RPQSFRINRYAESLSYMKGMRQV 311
           +G +F+ DP T  VK  F     + +S+ I  Y+ESL  + GM  V
Sbjct: 349 NGVIFLCDPITNSVKENFSIDNSKDESYVIVDYSESLFLIGGMLPV 394


>ref|XP_004233113.2| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           lycopersicum]
          Length = 426

 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
 Frame = +3

Query: 3   LGGLVCTIDNERVKS--VDGWVFDDGEQIWRKNYTFGPIEVNMDRLLWCSKNGKILGERA 176
           L G +C +D +      +D WV DD +  W K Y+ GP+ V  DR+L C +NG I+ +  
Sbjct: 291 LEGSLCMLDWDHKDDCHMDVWVMDDVDG-WSKKYSVGPL-VGFDRILGCLRNGDIVVKNE 348

Query: 177 DGKLFVFDPKTGCVKFLFYAAR-RPQSFRINRYAESLSYMKGMRQV 311
           +G +F+ DP T  VK  F     + +S+ +  Y+ESL  + GM  V
Sbjct: 349 NGVIFICDPITNSVKENFSIDNSKDESYVVVDYSESLFLIGGMLPV 394


>ref|XP_009799847.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana
           sylvestris]
          Length = 411

 Score = 58.2 bits (139), Expect = 8e-08
 Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
 Frame = +3

Query: 45  SVDGWVFDDGEQIWRKNYTFGPIEVNMDRLLWCSKNGKILGERADGKLFVFDPKTGCVKF 224
           +VD WV DD E  W K      +    DR++ C +NG I+ E  +G LF+FDP T  VK 
Sbjct: 303 NVDIWVMDD-EDGWSKKCNVEML-FGFDRIIGCLRNGNIVAEDENGVLFLFDPVTNSVKA 360

Query: 225 -LFYAARRPQSFRINRYAESLSYMKGMRQV 311
            L        SF I+ Y+ESL  ++GMR V
Sbjct: 361 KLCIDNANSGSFMISNYSESLVLIEGMRPV 390


>ref|XP_009762231.1| PREDICTED: F-box protein At3g08750-like [Nicotiana sylvestris]
          Length = 418

 Score = 55.5 bits (132), Expect = 7e-07
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
 Frame = +3

Query: 21  TIDNERVKSVDGWVFDDGEQIWRKNYTFGPIEVNMDRLLWCSKNGKILGERADGKLFVFD 200
           T D       D WV DD E  W K Y  GPI   ++R + C +NG I+ +  + ++F+FD
Sbjct: 300 TFDERDESHFDVWVMDD-EDGWTKKYNVGPIH-GLERTMGCLRNGDIVAKNKEEEVFLFD 357

Query: 201 PKTGCVKF-LFYAARRPQSFRINRYAESLSYMKGMRQV 311
           P T  VK  L   + +  ++ I  Y+ESL    GM  V
Sbjct: 358 PVTCSVKANLSIDSSKNGAYMIFDYSESLMLTGGMLPV 395


>ref|XP_009627941.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana
           tomentosiformis]
          Length = 418

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
 Frame = +3

Query: 21  TIDNERVKSVDGWVFDDGEQIWRKNYTFGPIEVNMDRLLWCSKNGKILGERADGKLFVFD 200
           T D       D WV DD E  W K Y  GP+ + ++R + C +NG I+ +  +  +F+FD
Sbjct: 300 TFDERDESHFDVWVMDD-EDGWTKKYKVGPL-LGLERTMGCLRNGDIVAKNKEEVVFLFD 357

Query: 201 PKTGCVKF-LFYAARRPQSFRINRYAESLSYMKGMRQV 311
           P T  VK  L   + +  ++ I  Y+ESL  + GM  V
Sbjct: 358 PVTCSVKANLSIDSSKNGAYMIFDYSESLMLIGGMLPV 395


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