BLASTX nr result
ID: Rehmannia28_contig00026907
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00026907
(385 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AJO25103.1| RNA polymerase beta (chloroplast) [Solanum lycope... 271 2e-92
ref|YP_009049675.1| hypothetical protein (mitochondrion) [Capsic... 271 2e-92
dbj|BAC77550.1| RNA polymerase beta' subunit [Nicotiana sylvestris] 269 2e-91
gb|ACB29310.1| RNA polymerase beta' subunit, partial (chloroplas... 266 2e-90
gb|AII18577.1| RNA polymerase beta subunit (chloroplast) [Viburn... 266 2e-90
ref|YP_008815021.1| RNA polymerase beta (chloroplast) [Metapanax... 266 3e-90
gb|AMO44331.1| RNA polymerase beta largest subunit, partial (chl... 266 3e-90
gb|AIJ03324.1| RNA polymerase beta subunit, partial (chloroplast... 266 4e-90
dbj|BAC77573.1| RNA polymerase beta' subunit [Nicotiana tomentos... 266 4e-90
gb|AII18578.1| RNA polymerase beta subunit (chloroplast) [Viburn... 265 9e-90
ref|YP_008815108.1| RNA polymerase beta (chloroplast) [Scheffler... 264 2e-89
gb|ACB29332.1| RNA polymerase beta' subunit, partial (chloroplas... 264 2e-89
gb|ACB29321.1| RNA polymerase beta' subunit, partial (chloroplas... 262 1e-88
ref|YP_008963386.1| RNA polymerase beta (chloroplast) [Sedum sar... 261 2e-88
ref|WP_042855006.1| hypothetical protein [Staphylococcus aureus] 261 2e-88
gb|AHE41639.1| RNA polymerase beta' subunit protein, partial (ch... 259 5e-88
gb|AFS60711.1| RNA polymerase beta subunit, partial [Fragaria ii... 266 6e-88
gb|AFS60684.1| RNA polymerase beta subunit, partial [Fragaria ve... 266 6e-88
gb|AHE41642.1| RNA polymerase beta' subunit protein, partial (ch... 259 7e-88
gb|ALI91113.1| RpoC1, partial (chloroplast) [Cassinopsis madagas... 259 2e-87
>gb|AJO25103.1| RNA polymerase beta (chloroplast) [Solanum lycopersicum]
gi|949600110|gb|ALN11564.1| RNA polymerase beta
(chloroplast) [Iochroma edule]
Length = 152
Score = 271 bits (694), Expect = 2e-92
Identities = 126/128 (98%), Positives = 126/128 (98%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 24 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 83
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD KEDPK CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 84 IGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 143
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 144 LEGLVYCD 151
>ref|YP_009049675.1| hypothetical protein (mitochondrion) [Capsicum annuum]
gi|675895310|ref|YP_009049784.1| hypothetical protein
(mitochondrion) [Capsicum annuum]
gi|667751749|gb|AIG89836.1| hypothetical protein
(mitochondrion) [Capsicum annuum]
gi|667751947|gb|AIG90033.1| hypothetical protein
(mitochondrion) [Capsicum annuum]
gi|667752056|gb|AIG90142.1| hypothetical protein
(mitochondrion) [Capsicum annuum]
Length = 152
Score = 271 bits (694), Expect = 2e-92
Identities = 126/128 (98%), Positives = 126/128 (98%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 24 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 83
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD KEDPK CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 84 IGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 143
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 144 LEGLVYCD 151
>dbj|BAC77550.1| RNA polymerase beta' subunit [Nicotiana sylvestris]
Length = 150
Score = 269 bits (688), Expect = 2e-91
Identities = 125/127 (98%), Positives = 125/127 (98%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 24 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 83
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD KEDPK CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 84 IGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 143
Query: 24 LEGLVYC 4
LEGLVYC
Sbjct: 144 LEGLVYC 150
>gb|ACB29310.1| RNA polymerase beta' subunit, partial (chloroplast) [Acicarpha
spathulata] gi|672235007|gb|AIJ03320.1| RNA polymerase
beta subunit, partial (chloroplast) [Calycera
crassifolia] gi|672235009|gb|AIJ03321.1| RNA polymerase
beta subunit, partial (chloroplast) [Gamocarpha alpina]
gi|672235017|gb|AIJ03325.1| RNA polymerase beta subunit,
partial (chloroplast) [Nastanthus caespitosus]
Length = 144
Score = 266 bits (681), Expect = 2e-90
Identities = 123/128 (96%), Positives = 124/128 (96%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQIS WA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 17 PQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 76
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD KEDP+ CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 77 IGDEKEDPQFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 136
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 137 LEGLVYCD 144
>gb|AII18577.1| RNA polymerase beta subunit (chloroplast) [Viburnum acerifolium]
gi|669217797|gb|AII18579.1| RNA polymerase beta subunit
(chloroplast) [Viburnum carlesii]
gi|669217799|gb|AII18580.1| RNA polymerase beta subunit
(chloroplast) [Viburnum cassinoides]
gi|669217801|gb|AII18581.1| RNA polymerase beta subunit
(chloroplast) [Viburnum clemensae]
gi|669217803|gb|AII18582.1| RNA polymerase beta subunit
(chloroplast) [Viburnum cylindricum]
gi|669217805|gb|AII18583.1| RNA polymerase beta subunit
(chloroplast) [Viburnum dentatum]
gi|669217807|gb|AII18584.1| RNA polymerase beta subunit
(chloroplast) [Viburnum dilatatum]
gi|669217809|gb|AII18585.1| RNA polymerase beta subunit
(chloroplast) [Viburnum erubescens]
gi|669217811|gb|AII18586.1| RNA polymerase beta subunit
(chloroplast) [Viburnum grandiflorum]
gi|669217813|gb|AII18587.1| RNA polymerase beta subunit
(chloroplast) [Viburnum lantanoides]
gi|669217815|gb|AII18588.1| RNA polymerase beta subunit
(chloroplast) [Viburnum lentago]
gi|669217817|gb|AII18589.1| RNA polymerase beta subunit
(chloroplast) [Viburnum lutescens]
gi|669217819|gb|AII18590.1| RNA polymerase beta subunit
(chloroplast) [Viburnum molle]
gi|669217821|gb|AII18591.1| RNA polymerase beta subunit
(chloroplast) [Viburnum opulus]
gi|669217823|gb|AII18592.1| RNA polymerase beta subunit
(chloroplast) [Viburnum plicatum]
gi|669217825|gb|AII18593.1| RNA polymerase beta subunit
(chloroplast) [Viburnum punctatum]
gi|669217827|gb|AII18594.1| RNA polymerase beta subunit
(chloroplast) [Viburnum sieboldii]
gi|669217829|gb|AII18595.1| RNA polymerase beta subunit
(chloroplast) [Viburnum taiwanianum]
gi|669217831|gb|AII18596.1| RNA polymerase beta subunit
(chloroplast) [Viburnum tinus]
gi|669217833|gb|AII18597.1| RNA polymerase beta subunit
(chloroplast) [Viburnum triphyllum]
gi|669217835|gb|AII18598.1| RNA polymerase beta subunit
(chloroplast) [Viburnum vernicosum]
Length = 152
Score = 266 bits (681), Expect = 2e-90
Identities = 123/128 (96%), Positives = 123/128 (96%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQIS WA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGIC CGNYRV
Sbjct: 24 PQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICTCGNYRV 83
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD KEDPK CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 84 IGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 143
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 144 LEGLVYCD 151
>ref|YP_008815021.1| RNA polymerase beta (chloroplast) [Metapanax delavayi]
gi|563940270|ref|YP_008814847.1| RNA polymerase beta
(chloroplast) [Aralia undulata]
gi|563940376|ref|YP_008815195.1| RNA polymerase beta
(chloroplast) [Kalopanax septemlobus]
gi|458599081|gb|AGG38947.1| RNA polymerase beta
(chloroplast) [Aralia undulata]
gi|458599362|gb|AGG39121.1| RNA polymerase beta
(chloroplast) [Metapanax delavayi]
gi|458599603|gb|AGG39295.1| RNA polymerase beta
(chloroplast) [Kalopanax septemlobus]
Length = 145
Score = 266 bits (680), Expect = 3e-90
Identities = 123/128 (96%), Positives = 124/128 (96%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQIS WA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 17 PQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 76
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IG+ KEDPK CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 77 IGNEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 136
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 137 LEGLVYCD 144
>gb|AMO44331.1| RNA polymerase beta largest subunit, partial (chloroplast) [Panax
ginseng] gi|1003359790|gb|AMO44333.1| RNA polymerase
beta largest subunit, partial (chloroplast) [Panax
ginseng]
Length = 151
Score = 266 bits (680), Expect = 3e-90
Identities = 123/128 (96%), Positives = 124/128 (96%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQIS WA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 24 PQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 83
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IG+ KEDPK CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 84 IGNEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 143
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 144 LEGLVYCD 151
>gb|AIJ03324.1| RNA polymerase beta subunit, partial (chloroplast) [Menyanthes
trifoliata]
Length = 144
Score = 266 bits (679), Expect = 4e-90
Identities = 123/128 (96%), Positives = 123/128 (96%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQIS WA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICAC NYRV
Sbjct: 17 PQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACANYRV 76
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD KEDPK CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 77 IGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 136
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 137 LEGLVYCD 144
>dbj|BAC77573.1| RNA polymerase beta' subunit [Nicotiana tomentosiformis]
Length = 149
Score = 266 bits (679), Expect = 4e-90
Identities = 124/126 (98%), Positives = 124/126 (98%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 24 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 83
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD KEDPK CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 84 IGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 143
Query: 24 LEGLVY 7
LEGLVY
Sbjct: 144 LEGLVY 149
>gb|AII18578.1| RNA polymerase beta subunit (chloroplast) [Viburnum amplificatum]
Length = 152
Score = 265 bits (677), Expect = 9e-90
Identities = 122/128 (95%), Positives = 123/128 (96%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQIS WA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGIC CGNYRV
Sbjct: 24 PQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICTCGNYRV 83
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IG+ KEDPK CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 84 IGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 143
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 144 LEGLVYCD 151
>ref|YP_008815108.1| RNA polymerase beta (chloroplast) [Schefflera delavayi]
gi|458599515|gb|AGG39208.1| RNA polymerase beta
(chloroplast) [Schefflera delavayi]
Length = 145
Score = 264 bits (675), Expect = 2e-89
Identities = 122/128 (95%), Positives = 123/128 (96%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQIS WA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 17 PQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 76
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IG+ KEDP CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 77 IGNEKEDPNFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 136
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 137 LEGLVYCD 144
>gb|ACB29332.1| RNA polymerase beta' subunit, partial (chloroplast) [Chuquiraga
spinosa] gi|170665603|gb|ACB29341.1| RNA polymerase
beta' subunit, partial (chloroplast) [Doniophyton
anomalum]
Length = 144
Score = 264 bits (674), Expect = 2e-89
Identities = 121/128 (94%), Positives = 124/128 (96%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQIS W+ KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPI+SGICACGNYRV
Sbjct: 17 PQQISTWSNKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIQSGICACGNYRV 76
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD KEDPK CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPL+E
Sbjct: 77 IGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLQE 136
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 137 LEGLVYCD 144
>gb|ACB29321.1| RNA polymerase beta' subunit, partial (chloroplast) [Barnadesia
odorata] gi|170665593|gb|ACB29336.1| RNA polymerase
beta' subunit, partial (chloroplast) [Dasyphyllum
reticulatum]
Length = 144
Score = 262 bits (669), Expect = 1e-88
Identities = 120/128 (93%), Positives = 123/128 (96%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQIS W+ KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPI+SGICACGNYRV
Sbjct: 17 PQQISTWSNKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIQSGICACGNYRV 76
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD KEDPK CEQCGVEFVDSRIRRYQMGYIKL CPVTHVWYLKRLPSYIANLLDKPL+E
Sbjct: 77 IGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLECPVTHVWYLKRLPSYIANLLDKPLQE 136
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 137 LEGLVYCD 144
>ref|YP_008963386.1| RNA polymerase beta (chloroplast) [Sedum sarmentosum]
gi|402797521|gb|AFQ99053.1| RNA polymerase beta
(chloroplast) [Sedum sarmentosum]
Length = 145
Score = 261 bits (668), Expect = 2e-88
Identities = 121/128 (94%), Positives = 123/128 (96%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQISAWA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 17 PQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 76
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD K+ K CEQCGVEFVDSR+RRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 77 IGDEKDHLKFCEQCGVEFVDSRVRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 136
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 137 LEGLVYCD 144
>ref|WP_042855006.1| hypothetical protein [Staphylococcus aureus]
Length = 152
Score = 261 bits (668), Expect = 2e-88
Identities = 121/128 (94%), Positives = 123/128 (96%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQISAWA KILPNGE VGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 24 PQQISAWAKKILPNGETVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 83
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IG+ KE PK CEQCGVEFVDSRIRRYQMGYI+LACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 84 IGNQKEGPKFCEQCGVEFVDSRIRRYQMGYIRLACPVTHVWYLKRLPSYIANLLDKPLKE 143
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 144 LEGLVYCD 151
>gb|AHE41639.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Cercidiphyllum japonicum]
Length = 123
Score = 259 bits (663), Expect = 5e-88
Identities = 119/123 (96%), Positives = 120/123 (97%)
Frame = -2
Query: 369 AWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDAK 190
AWA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGD K
Sbjct: 1 AWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEK 60
Query: 189 EDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLV 10
EDPK CEQCGVEFVDSR+RRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLV
Sbjct: 61 EDPKFCEQCGVEFVDSRVRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLV 120
Query: 9 YCD 1
YCD
Sbjct: 121 YCD 123
>gb|AFS60711.1| RNA polymerase beta subunit, partial [Fragaria iinumae]
Length = 308
Score = 266 bits (680), Expect = 6e-88
Identities = 123/128 (96%), Positives = 125/128 (97%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQISAWA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 17 PQQISAWAHKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 76
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD K+DP+ CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 77 IGDEKKDPRFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 136
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 137 LEGLVYCD 144
>gb|AFS60684.1| RNA polymerase beta subunit, partial [Fragaria vesca subsp.
americana] gi|406822442|gb|AFS60685.1| RNA polymerase
beta subunit, partial [Fragaria vesca subsp. vesca]
gi|406822445|gb|AFS60687.1| RNA polymerase beta subunit,
partial [Fragaria x bifera] gi|406822451|gb|AFS60691.1|
RNA polymerase beta subunit, partial [Fragaria
virginiana] gi|406822454|gb|AFS60693.1| RNA polymerase
beta subunit, partial [Fragaria bucharica]
gi|406822457|gb|AFS60695.1| RNA polymerase beta subunit,
partial [Fragaria orientalis]
gi|406822460|gb|AFS60697.1| RNA polymerase beta subunit,
partial [Fragaria viridis] gi|406822463|gb|AFS60699.1|
RNA polymerase beta subunit, partial [Fragaria
chinensis] gi|406822466|gb|AFS60701.1| RNA polymerase
beta subunit, partial [Fragaria moupinensis]
gi|406822469|gb|AFS60703.1| RNA polymerase beta subunit,
partial [Fragaria tibetica] gi|406822472|gb|AFS60705.1|
RNA polymerase beta subunit, partial [Fragaria
daltoniana] gi|406822475|gb|AFS60707.1| RNA polymerase
beta subunit, partial [Fragaria corymbosa]
gi|406822478|gb|AFS60709.1| RNA polymerase beta subunit,
partial [Fragaria gracilis]
Length = 308
Score = 266 bits (680), Expect = 6e-88
Identities = 123/128 (96%), Positives = 125/128 (97%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQISAWA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 17 PQQISAWAHKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 76
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD K+DP+ CEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 77 IGDEKKDPRFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 136
Query: 24 LEGLVYCD 1
LEGLVYCD
Sbjct: 137 LEGLVYCD 144
>gb|AHE41642.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Exbucklandia populnea]
Length = 123
Score = 259 bits (662), Expect = 7e-88
Identities = 119/123 (96%), Positives = 120/123 (97%)
Frame = -2
Query: 369 AWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDAK 190
AWA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGD K
Sbjct: 1 AWAKKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEK 60
Query: 189 EDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLV 10
EDPK CEQCGVEFVDSR+RRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLV
Sbjct: 61 EDPKFCEQCGVEFVDSRVRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLV 120
Query: 9 YCD 1
YCD
Sbjct: 121 YCD 123
>gb|ALI91113.1| RpoC1, partial (chloroplast) [Cassinopsis madagascariensis]
Length = 147
Score = 259 bits (662), Expect = 2e-87
Identities = 120/124 (96%), Positives = 121/124 (97%)
Frame = -2
Query: 384 PQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 205
PQQISAWA KILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV
Sbjct: 24 PQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRV 83
Query: 204 IGDAKEDPKSCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 25
IGD KEDPK CEQCGVEF+DSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE
Sbjct: 84 IGDEKEDPKFCEQCGVEFIDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKE 143
Query: 24 LEGL 13
LEGL
Sbjct: 144 LEGL 147