BLASTX nr result
ID: Rehmannia28_contig00026906
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00026906
(760 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP36767.1| DNA-directed RNA polymerase subunit beta [Cajanus... 432 e-151
gb|AFS35502.1| RNA polymerase beta subunit, partial [Fragaria pe... 427 e-150
ref|XP_010100017.1| DNA-directed RNA polymerase subunit beta [Mo... 426 e-150
emb|CDX77004.1| BnaC04g37990D [Brassica napus] 434 e-148
gb|AFS60690.1| RNA polymerase beta subunit, partial [Fragaria x ... 436 e-146
gb|AFS60683.1| RNA polymerase beta subunit, partial [Fragaria ve... 436 e-146
gb|ALI91095.1| RpoB, partial (chloroplast) [Polypremum procumbens] 442 e-146
gb|ALO62115.1| RNA polymerase beta subunit (chloroplast) [Cresce... 443 e-146
gb|AKZ23860.1| RNA polymerase beta subunit (plastid) [Veronica a... 443 e-146
ref|YP_004940502.1| rpoB gene product (chloroplast) [Dorcoceras ... 443 e-146
ref|YP_009239191.1| RNA polymerase beta subunit (chloroplast) [P... 442 e-145
gb|ALI91107.1| RpoB, partial (chloroplast) [Vahlia capensis] 441 e-145
ref|YP_008963472.1| RNA polymerase beta subunit (chloroplast) [P... 441 e-145
ref|YP_009240591.1| RNA polymerase beta subunit (chloroplast) [I... 441 e-145
ref|YP_635631.1| RNA polymerase beta subunit [Solanum tuberosum]... 441 e-145
ref|YP_538840.1| RNA polymerase beta subunit [Solanum bulbocasta... 441 e-145
gb|ALI91085.1| RpoB, partial (chloroplast) [Nama carnosa] 441 e-145
ref|YP_009171860.1| RpoB (chloroplast) [Solanum nigrum] gi|83320... 441 e-145
gb|AKZ23857.1| RNA polymerase beta subunit (plastid) [Verbascum ... 441 e-145
gb|AKZ23851.1| RNA polymerase beta subunit (plastid) [Solanum tr... 441 e-145
>gb|KYP36767.1| DNA-directed RNA polymerase subunit beta [Cajanus cajan]
Length = 325
Score = 432 bits (1112), Expect = e-151
Identities = 212/220 (96%), Positives = 217/220 (98%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAGG+LDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 106 VFNPLGVPSRMNVGQIFECSLGLAGGMLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 165
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPW+FEPE PGKSRIFDGRTG+PFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 166 TANPWIFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 225
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLG TIIGGTIP
Sbjct: 226 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGATIIGGTIP 285
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
PEDAPESFRLLVRELRSLALELNHFLVSEKNF+I+RKEA
Sbjct: 286 KPEDAPESFRLLVRELRSLALELNHFLVSEKNFEIHRKEA 325
>gb|AFS35502.1| RNA polymerase beta subunit, partial [Fragaria pentaphylla]
Length = 248
Score = 427 bits (1097), Expect = e-150
Identities = 211/215 (98%), Positives = 212/215 (98%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 34 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 93
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTG+PFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 94 TANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 153
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 154 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 213
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQI 645
P DAPESFRLLVRELRSLALELNHFLVSEKNFQI
Sbjct: 214 KPADAPESFRLLVRELRSLALELNHFLVSEKNFQI 248
>ref|XP_010100017.1| DNA-directed RNA polymerase subunit beta [Morus notabilis]
gi|587892613|gb|EXB81188.1| DNA-directed RNA polymerase
subunit beta [Morus notabilis]
Length = 232
Score = 426 bits (1095), Expect = e-150
Identities = 209/219 (95%), Positives = 213/219 (97%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVG IFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 13 VFNPLGVPSRMNVGHIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 72
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTG+PFEQPVIIGKPYILKLIHQVDDKIHGR SGHYALVT
Sbjct: 73 TANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRCSGHYALVT 132
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTT++GG IP
Sbjct: 133 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTMVGGPIP 192
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 657
PEDAPESFRLLVRELRSLALELNHFLV EKNFQINRK+
Sbjct: 193 KPEDAPESFRLLVRELRSLALELNHFLVFEKNFQINRKD 231
>emb|CDX77004.1| BnaC04g37990D [Brassica napus]
Length = 527
Score = 434 bits (1115), Expect = e-148
Identities = 214/219 (97%), Positives = 216/219 (98%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAG LLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 308 VFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 367
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTG+PFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 368 TANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 427
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 428 QQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 487
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 657
PEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE
Sbjct: 488 KPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE 526
>gb|AFS60690.1| RNA polymerase beta subunit, partial [Fragaria x ananassa subsp.
cuneifolia]
Length = 807
Score = 436 bits (1122), Expect = e-146
Identities = 216/220 (98%), Positives = 217/220 (98%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 588 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 647
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTG+PFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 648 TANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 707
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 708 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 767
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
P DAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 768 KPADAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 807
>gb|AFS60683.1| RNA polymerase beta subunit, partial [Fragaria vesca subsp.
americana] gi|406822443|gb|AFS60686.1| RNA polymerase
beta subunit, partial [Fragaria vesca subsp. vesca]
gi|406822446|gb|AFS60688.1| RNA polymerase beta subunit,
partial [Fragaria x bifera] gi|406822452|gb|AFS60692.1|
RNA polymerase beta subunit, partial [Fragaria
virginiana] gi|406822455|gb|AFS60694.1| RNA polymerase
beta subunit, partial [Fragaria bucharica]
gi|406822458|gb|AFS60696.1| RNA polymerase beta subunit,
partial [Fragaria orientalis] gi|406822461|gb|AFS60698.1|
RNA polymerase beta subunit, partial [Fragaria viridis]
gi|406822464|gb|AFS60700.1| RNA polymerase beta subunit,
partial [Fragaria chinensis] gi|406822467|gb|AFS60702.1|
RNA polymerase beta subunit, partial [Fragaria
moupinensis] gi|406822470|gb|AFS60704.1| RNA polymerase
beta subunit, partial [Fragaria tibetica]
gi|406822473|gb|AFS60706.1| RNA polymerase beta subunit,
partial [Fragaria daltoniana] gi|406822476|gb|AFS60708.1|
RNA polymerase beta subunit, partial [Fragaria corymbosa]
gi|406822479|gb|AFS60710.1| RNA polymerase beta subunit,
partial [Fragaria gracilis]
Length = 807
Score = 436 bits (1122), Expect = e-146
Identities = 216/220 (98%), Positives = 217/220 (98%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 588 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 647
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTG+PFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 648 TANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 707
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 708 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 767
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
P DAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 768 KPADAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 807
>gb|ALI91095.1| RpoB, partial (chloroplast) [Polypremum procumbens]
Length = 1041
Score = 442 bits (1138), Expect = e-146
Identities = 218/220 (99%), Positives = 219/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 822 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 881
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 882 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 941
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTI+GGTIP
Sbjct: 942 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIVGGTIP 1001
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1002 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1041
>gb|ALO62115.1| RNA polymerase beta subunit (chloroplast) [Crescentia cujete]
Length = 1070
Score = 443 bits (1139), Expect = e-146
Identities = 219/220 (99%), Positives = 219/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070
>gb|AKZ23860.1| RNA polymerase beta subunit (plastid) [Veronica americana]
Length = 1070
Score = 443 bits (1139), Expect = e-146
Identities = 219/220 (99%), Positives = 219/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070
>ref|YP_004940502.1| rpoB gene product (chloroplast) [Dorcoceras hygrometricum]
gi|340549399|gb|AEK53221.1| RNA polymerase beta subunit
(chloroplast) [Dorcoceras hygrometricum]
Length = 1070
Score = 443 bits (1139), Expect = e-146
Identities = 219/220 (99%), Positives = 219/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070
>ref|YP_009239191.1| RNA polymerase beta subunit (chloroplast) [Pedicularis ishidoyana]
gi|1001185276|gb|AML80478.1| RNA polymerase beta subunit
(chloroplast) [Pedicularis ishidoyana]
Length = 1070
Score = 442 bits (1136), Expect = e-145
Identities = 218/220 (99%), Positives = 219/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQ+FECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQMFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070
>gb|ALI91107.1| RpoB, partial (chloroplast) [Vahlia capensis]
Length = 1047
Score = 441 bits (1133), Expect = e-145
Identities = 218/220 (99%), Positives = 218/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAG LLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 828 VFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 887
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 888 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 947
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 948 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1007
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1008 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1047
>ref|YP_008963472.1| RNA polymerase beta subunit (chloroplast) [Penthorum chinense]
gi|403226773|gb|AFR25652.1| RNA polymerase beta subunit
(chloroplast) [Penthorum chinense]
Length = 1070
Score = 441 bits (1134), Expect = e-145
Identities = 218/220 (99%), Positives = 219/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTG+PFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070
>ref|YP_009240591.1| RNA polymerase beta subunit (chloroplast) [Iochroma cardenasianum]
gi|1004170740|gb|AMP19568.1| RNA polymerase beta subunit
(chloroplast) [Iochroma cardenasianum]
Length = 1070
Score = 441 bits (1133), Expect = e-145
Identities = 218/220 (99%), Positives = 218/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAG LLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070
>ref|YP_635631.1| RNA polymerase beta subunit [Solanum tuberosum]
gi|938339664|ref|YP_009171774.1| RpoB (chloroplast)
[Solanum commersonii] gi|88656796|gb|ABD47049.1| RNA
polymerase beta subunit (chloroplast) [Solanum tuberosum]
gi|833204613|gb|AKM21851.1| RpoB (chloroplast) [Solanum
commersonii] gi|833204876|gb|AKM22023.1| RpoB
(chloroplast) [Solanum tuberosum]
Length = 1070
Score = 441 bits (1133), Expect = e-145
Identities = 218/220 (99%), Positives = 218/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAG LLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070
>ref|YP_538840.1| RNA polymerase beta subunit [Solanum bulbocastanum]
gi|109914397|sp|Q2MIJ5.1|RPOB_SOLBU RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|84371887|gb|ABC56205.1| RNA polymerase beta subunit
[Solanum bulbocastanum]
Length = 1070
Score = 441 bits (1133), Expect = e-145
Identities = 218/220 (99%), Positives = 218/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAG LLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070
>gb|ALI91085.1| RpoB, partial (chloroplast) [Nama carnosa]
Length = 1070
Score = 441 bits (1133), Expect = e-145
Identities = 218/220 (99%), Positives = 218/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAG LLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070
>ref|YP_009171860.1| RpoB (chloroplast) [Solanum nigrum] gi|833204739|gb|AKM21937.1| RpoB
(chloroplast) [Solanum nigrum]
gi|937501420|gb|ALI31132.1| RNA polymerase beta subunit
(chloroplast) [Solanum nigrum]
Length = 1070
Score = 441 bits (1133), Expect = e-145
Identities = 218/220 (99%), Positives = 218/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAG LLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070
>gb|AKZ23857.1| RNA polymerase beta subunit (plastid) [Verbascum thapsus]
Length = 1070
Score = 441 bits (1133), Expect = e-145
Identities = 217/220 (98%), Positives = 219/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAGGLL+RHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQIFECSLGLAGGLLNRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTI+GGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIVGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070
>gb|AKZ23851.1| RNA polymerase beta subunit (plastid) [Solanum triflorum]
Length = 1070
Score = 441 bits (1133), Expect = e-145
Identities = 218/220 (99%), Positives = 218/220 (99%)
Frame = +1
Query: 1 VFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 180
VFNPLGVPSRMNVGQIFECSLGLAG LLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ
Sbjct: 851 VFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQ 910
Query: 181 TANPWVFEPECPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 360
TANPWVFEPE PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT
Sbjct: 911 TANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVT 970
Query: 361 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 540
QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP
Sbjct: 971 QQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIP 1030
Query: 541 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 660
NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
Sbjct: 1031 NPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA 1070