BLASTX nr result

ID: Rehmannia28_contig00026894 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00026894
         (300 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012853142.1| PREDICTED: pentatricopeptide repeat-containi...   123   8e-31
ref|XP_012840386.1| PREDICTED: pentatricopeptide repeat-containi...   123   8e-31
ref|XP_012854029.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-28
ref|XP_011087317.1| PREDICTED: pentatricopeptide repeat-containi...   107   3e-25
ref|XP_011087320.1| PREDICTED: pentatricopeptide repeat-containi...    95   8e-21
ref|XP_011087319.1| PREDICTED: pentatricopeptide repeat-containi...    95   8e-21

>ref|XP_012853142.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Erythranthe guttata]
           gi|848908341|ref|XP_012853143.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21065-like [Erythranthe guttata]
          Length = 999

 Score =  123 bits (309), Expect = 8e-31
 Identities = 61/89 (68%), Positives = 70/89 (78%)
 Frame = -1

Query: 267 DLMGCDFASVVMRNPPQSVINGILSTFHGVPRRCSTFLPSKNCILYSLGFRSSFCTAALR 88
           D+MGCDF ++ MR+PP+ V+ GILSTF GV RRCSTF P+KN +LYSLGFRSSF TAAL 
Sbjct: 9   DVMGCDFVTMQMRSPPRIVVEGILSTFCGVHRRCSTFYPTKNHLLYSLGFRSSFSTAALI 68

Query: 87  TTGKPNGEFGYRRNPEKVRPRHESKEPHS 1
           TT +PN  F  RRNPEKVRP HE KE  S
Sbjct: 69  TTKEPNWGFDSRRNPEKVRPWHELKEAQS 97


>ref|XP_012840386.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Erythranthe guttata]
           gi|848880003|ref|XP_012840387.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21065-like [Erythranthe guttata]
          Length = 999

 Score =  123 bits (309), Expect = 8e-31
 Identities = 61/89 (68%), Positives = 70/89 (78%)
 Frame = -1

Query: 267 DLMGCDFASVVMRNPPQSVINGILSTFHGVPRRCSTFLPSKNCILYSLGFRSSFCTAALR 88
           D+MGCDF ++ MR+PP+ V+ GILSTF GV RRCSTF P+KN +LYSLGFRSSF TAAL 
Sbjct: 9   DVMGCDFVTMQMRSPPRIVVEGILSTFCGVHRRCSTFYPTKNHLLYSLGFRSSFSTAALI 68

Query: 87  TTGKPNGEFGYRRNPEKVRPRHESKEPHS 1
           TT +PN  F  RRNPEKVRP HE KE  S
Sbjct: 69  TTKEPNWGFDSRRNPEKVRPWHELKEAQS 97


>ref|XP_012854029.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Erythranthe guttata]
          Length = 999

 Score =  115 bits (289), Expect = 4e-28
 Identities = 59/89 (66%), Positives = 67/89 (75%)
 Frame = -1

Query: 267 DLMGCDFASVVMRNPPQSVINGILSTFHGVPRRCSTFLPSKNCILYSLGFRSSFCTAALR 88
           D+MGCDF S+ MR+PP+ V+ GILS F GV R CSTF P+KN +L SLGFRSSF TAAL 
Sbjct: 9   DVMGCDFVSMQMRSPPRIVVEGILSNFCGVHRMCSTFYPTKNHLLCSLGFRSSFSTAALI 68

Query: 87  TTGKPNGEFGYRRNPEKVRPRHESKEPHS 1
           TT +PN  F  RRNPEKVR  HESKE  S
Sbjct: 69  TTKEPNWGFDSRRNPEKVRHWHESKEAQS 97


>ref|XP_011087317.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like isoform X1 [Sesamum indicum]
           gi|747080154|ref|XP_011087318.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like isoform X1 [Sesamum indicum]
          Length = 1032

 Score =  107 bits (268), Expect = 3e-25
 Identities = 56/88 (63%), Positives = 61/88 (69%)
 Frame = -1

Query: 264 LMGCDFASVVMRNPPQSVINGILSTFHGVPRRCSTFLPSKNCILYSLGFRSSFCTAALRT 85
           LMGC FAS  MRN PQ+V  GILSTF GVP RCS F  + N + YS G RSSF TAALRT
Sbjct: 39  LMGCHFASSQMRNRPQTVFRGILSTFPGVPGRCSAFSLTNNHLFYSFGSRSSFSTAALRT 98

Query: 84  TGKPNGEFGYRRNPEKVRPRHESKEPHS 1
           T KP+ EF YRRN EK+ P   SKE  S
Sbjct: 99  TEKPSREFSYRRNREKILPWQASKESQS 126


>ref|XP_011087320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like isoform X3 [Sesamum indicum]
          Length = 984

 Score = 95.1 bits (235), Expect = 8e-21
 Identities = 49/78 (62%), Positives = 54/78 (69%)
 Frame = -1

Query: 234 MRNPPQSVINGILSTFHGVPRRCSTFLPSKNCILYSLGFRSSFCTAALRTTGKPNGEFGY 55
           MRN PQ+V  GILSTF GVP RCS F  + N + YS G RSSF TAALRTT KP+ EF Y
Sbjct: 1   MRNRPQTVFRGILSTFPGVPGRCSAFSLTNNHLFYSFGSRSSFSTAALRTTEKPSREFSY 60

Query: 54  RRNPEKVRPRHESKEPHS 1
           RRN EK+ P   SKE  S
Sbjct: 61  RRNREKILPWQASKESQS 78


>ref|XP_011087319.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like isoform X2 [Sesamum indicum]
          Length = 1003

 Score = 95.1 bits (235), Expect = 8e-21
 Identities = 49/78 (62%), Positives = 54/78 (69%)
 Frame = -1

Query: 234 MRNPPQSVINGILSTFHGVPRRCSTFLPSKNCILYSLGFRSSFCTAALRTTGKPNGEFGY 55
           MRN PQ+V  GILSTF GVP RCS F  + N + YS G RSSF TAALRTT KP+ EF Y
Sbjct: 20  MRNRPQTVFRGILSTFPGVPGRCSAFSLTNNHLFYSFGSRSSFSTAALRTTEKPSREFSY 79

Query: 54  RRNPEKVRPRHESKEPHS 1
           RRN EK+ P   SKE  S
Sbjct: 80  RRNREKILPWQASKESQS 97


Top