BLASTX nr result

ID: Rehmannia28_contig00026767 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00026767
         (437 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081010.1| PREDICTED: F-box protein At3g07870-like [Ses...    65   8e-22
ref|XP_011081011.1| PREDICTED: F-box protein At3g07870-like [Ses...    53   3e-10

>ref|XP_011081010.1| PREDICTED: F-box protein At3g07870-like [Sesamum indicum]
          Length = 411

 Score = 65.5 bits (158), Expect(2) = 8e-22
 Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +2

Query: 227 CSTFLNGVTYWLDNL-SEVXXXXXXXXXXXXIDLPPEFGEEHLRIKHCMSIGVLEGCLCL 403
           CS  ++GV YWLD    ++            I LP E+GEE L     MSIGVL GCLCL
Sbjct: 231 CSATVDGVLYWLDQTWKDIVFFDFERELFGEIALPSEYGEEQLSKIEFMSIGVLGGCLCL 290

Query: 404 SYSAYNAHHVD 436
           SY+ +NA HVD
Sbjct: 291 SYNVHNAPHVD 301



 Score = 65.1 bits (157), Expect(2) = 8e-22
 Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +3

Query: 15  VVHENSIFLRTKSMWLGFSPVTNQYKVLRIFIAMNENAEHVFMGAQVLVIGSSSW-NYIN 191
           V  E  +   TKSMWLG+S  +NQYKVLR++  +N+    + MGAQVLV+GS+ W N  N
Sbjct: 162 VDRETRLLFGTKSMWLGYSSGSNQYKVLRLYSRINDGP--LDMGAQVLVVGSNWWRNVEN 219

Query: 192 MLLCHDYSWDAC 227
             +  D SWD C
Sbjct: 220 TPVGRDISWDDC 231


>ref|XP_011081011.1| PREDICTED: F-box protein At3g07870-like [Sesamum indicum]
          Length = 408

 Score = 52.8 bits (125), Expect(2) = 3e-10
 Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
 Frame = +3

Query: 45  TKSMWLGFSPVTNQYKVLRIFIAMNENAEHV----FMGAQVLVIGSSSWNYINMLLCHDY 212
           T   W GFSP  NQYKVLR+F  +      +       AQV V+GS SW Y+      +Y
Sbjct: 164 TMGSWFGFSPAENQYKVLRLFSTLTGKPWQIGFRQEFWAQVHVVGSDSWRYLEDKPLSEY 223

Query: 213 -SWDAC 227
            SWD C
Sbjct: 224 LSWDTC 229



 Score = 38.5 bits (88), Expect(2) = 3e-10
 Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
 Frame = +2

Query: 227 CSTFLNGVTYWLDNLSE----VXXXXXXXXXXXXIDLPPEFGEEHLRIKHCMSIGVLEGC 394
           CS FLNG   WL    E    +            I  PP FG +    K  MSIGVL G 
Sbjct: 229 CSVFLNGTVNWLCKYPELSKFIIFFDFQKEKFGEILPPPSFGIDQRLSKQSMSIGVLGGY 288

Query: 395 LCLS 406
           LC++
Sbjct: 289 LCVT 292


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