BLASTX nr result

ID: Rehmannia28_contig00026438 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00026438
         (1240 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP63741.1| Copia protein [Cajanus cajan]                           56   3e-06
gb|KYP58941.1| Copia protein [Cajanus cajan]                           56   3e-06

>gb|KYP63741.1| Copia protein [Cajanus cajan]
          Length = 137

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
 Frame = -1

Query: 1153 IWLRIIVTRLHLMNGFELPVKI----KMTIKRSCHI*STEALLCRYIKFLLLRKEXXXXX 986
            IWLR  +T L ++NG E P+KI       +  S +  ST       IKFL++++      
Sbjct: 37   IWLRNFITNLRVVNGIERPLKIYCDNNSAVLYSNNNRSTTKSKFIDIKFLVVKERVQNKQ 96

Query: 985  XXXXXX*R*ILCLQNPLTKVLILKDFHEHTAHMGVIIDHTLV 860
                      + L +PLTK L+ K FHEHTAHMGVI   TLV
Sbjct: 97   ISIEHIGTNFM-LADPLTKGLVPKVFHEHTAHMGVIPYSTLV 137


>gb|KYP58941.1| Copia protein [Cajanus cajan]
          Length = 137

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
 Frame = -1

Query: 1153 IWLRIIVTRLHLMNGFELPVKI----KMTIKRSCHI*STEALLCRYIKFLLLRKEXXXXX 986
            IWLR  +T L ++NG E P+KI       +  S +  ST       IKFL++++      
Sbjct: 37   IWLRNFITNLRVVNGIERPLKIYCDNNSAVLYSNNNRSTTKSKFIDIKFLVVKERVQNKQ 96

Query: 985  XXXXXX*R*ILCLQNPLTKVLILKDFHEHTAHMGVIIDHTLV 860
                      + L +PLTK L+ K FHEHTAHMGVI   TLV
Sbjct: 97   ISIEHIGTNFM-LADPLTKGLVPKVFHEHTAHMGVIPYSTLV 137


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