BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00026174
         (2343 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099540.1| PREDICTED: chloroplastic group IIA intron sp...  1058   0.0  
ref|XP_011099539.1| PREDICTED: chloroplastic group IIA intron sp...  1053   0.0  
ref|XP_012854615.1| PREDICTED: chloroplastic group IIA intron sp...   958   0.0  
gb|EYU44617.1| hypothetical protein MIMGU_mgv1a026522mg, partial...   907   0.0  
ref|XP_010316321.1| PREDICTED: chloroplastic group IIA intron sp...   803   0.0  
ref|XP_009598916.1| PREDICTED: chloroplastic group IIA intron sp...   802   0.0  
ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp...   801   0.0  
ref|XP_009787271.1| PREDICTED: chloroplastic group IIA intron sp...   799   0.0  
ref|XP_015065411.1| PREDICTED: chloroplastic group IIA intron sp...   798   0.0  
ref|XP_015065406.1| PREDICTED: chloroplastic group IIA intron sp...   798   0.0  
ref|XP_009598920.1| PREDICTED: chloroplastic group IIA intron sp...   798   0.0  
ref|XP_015169109.1| PREDICTED: chloroplastic group IIA intron sp...   797   0.0  
ref|XP_009787273.1| PREDICTED: chloroplastic group IIA intron sp...   795   0.0  
emb|CDP02762.1| unnamed protein product [Coffea canephora]            779   0.0  
ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron sp...   779   0.0  
ref|XP_009598918.1| PREDICTED: chloroplastic group IIA intron sp...   776   0.0  
ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron sp...   773   0.0  
ref|XP_009787272.1| PREDICTED: chloroplastic group IIA intron sp...   773   0.0  
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp...   736   0.0  
ref|XP_012491296.1| PREDICTED: chloroplastic group IIA intron sp...   733   0.0  

>ref|XP_011099540.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Sesamum indicum]
            gi|747102739|ref|XP_011099541.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X2 [Sesamum indicum]
          Length = 805

 Score = 1058 bits (2736), Expect = 0.0
 Identities = 539/681 (79%), Positives = 595/681 (87%), Gaps = 1/681 (0%)
 Frame = -2

Query: 2336 LTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAE 2157
            LTGKVGG RGKVAMKKIFKGIEKLQE  +LEE    P+NLKF+FAPG LWG+G  E+ +E
Sbjct: 125  LTGKVGGGRGKVAMKKIFKGIEKLQENQNLEETRNDPKNLKFRFAPGALWGDGDCENGSE 184

Query: 2156 VQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVTAAESILD 1977
            V+E SE  Q S ES  FDIPL           +PW+R E+MVIR VKKEKVV A E  LD
Sbjct: 185  VEEKSEAAQESWESNGFDIPLPEVEKEVKLKEMPWQRHEKMVIRMVKKEKVVRADELGLD 244

Query: 1976 GILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQE 1797
             +LLERLR EAA IRKWVKVKKAGVTQAVVDQVHF+WRNNELALLKFD+PLC+NM RA+E
Sbjct: 245  EMLLERLRGEAATIRKWVKVKKAGVTQAVVDQVHFVWRNNELALLKFDLPLCRNMHRARE 304

Query: 1796 IVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNYQNTTTFA 1617
            IVEMKTGGVVVW NKDFLAVYRG  Y+SGSK+  N    S GD EN SSTMN+QNTTT A
Sbjct: 305  IVEMKTGGVVVWSNKDFLAVYRGCNYKSGSKNFWNKHGKSAGDEENFSSTMNHQNTTTVA 364

Query: 1616 RVSSDGSSLDDTIHGKD-KWESLQMASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLL 1440
            RVS DGS+LD+ IH KD +WESL M SLYEREADRLLDGLGPRFVDWWMQKPLPVD DLL
Sbjct: 365  RVSPDGSALDEMIHEKDGEWESLHMPSLYEREADRLLDGLGPRFVDWWMQKPLPVDADLL 424

Query: 1439 PELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLW 1260
            PELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLW
Sbjct: 425  PELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLW 484

Query: 1259 EKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVT 1080
            EKCHIAKIALKWG+PNTDNEQMANELK+LTGGVLLLRNK+LIILYRGKDF+PSEVA+ V 
Sbjct: 485  EKCHIAKIALKWGIPNTDNEQMANELKNLTGGVLLLRNKYLIILYRGKDFVPSEVAEAVA 544

Query: 1079 EREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIGNLKKDKTEV 900
            EREM LTRCQL+EE ARLKASE FSI+DE  ++SG+ GTLSEF  IHS+IGN KK +TE+
Sbjct: 545  EREMELTRCQLREETARLKASEAFSISDEDSVNSGIVGTLSEFQHIHSEIGNHKKRETEI 604

Query: 899  DVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEER 720
            +VQLEAE  RLEKELK+QERKL+ILKKKIEKSAK LEKLKNASRFSEQDPD+E+IS+EER
Sbjct: 605  EVQLEAERERLEKELKEQERKLYILKKKIEKSAKRLEKLKNASRFSEQDPDVEVISKEER 664

Query: 719  RCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVMYTAKRVEA 540
            +CLRE+GLK DSSL LGRRGVYDGVIEG+HQHWKHREIVKVITMQKK  QV++TAK +EA
Sbjct: 665  QCLREMGLKIDSSLVLGRRGVYDGVIEGIHQHWKHREIVKVITMQKKLLQVLHTAKCLEA 724

Query: 539  ESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQRLGSLKFFAH 360
            ESGGILV+++KLKEGHAII+YRGKNYKRPKSA  NLL+K+EALSRSLEIQRLGSLKFFA+
Sbjct: 725  ESGGILVNVIKLKEGHAIILYRGKNYKRPKSAAQNLLSKKEALSRSLEIQRLGSLKFFAN 784

Query: 359  QREQAIYDLKCKLADLSTKNS 297
            QREQAI DLK +LA+L  K +
Sbjct: 785  QREQAICDLKSELAELLEKKN 805


>ref|XP_011099539.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Sesamum indicum]
          Length = 806

 Score = 1053 bits (2723), Expect = 0.0
 Identities = 536/673 (79%), Positives = 590/673 (87%), Gaps = 1/673 (0%)
 Frame = -2

Query: 2336 LTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAE 2157
            LTGKVGG RGKVAMKKIFKGIEKLQE  +LEE    P+NLKF+FAPG LWG+G  E+ +E
Sbjct: 125  LTGKVGGGRGKVAMKKIFKGIEKLQENQNLEETRNDPKNLKFRFAPGALWGDGDCENGSE 184

Query: 2156 VQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVTAAESILD 1977
            V+E SE  Q S ES  FDIPL           +PW+R E+MVIR VKKEKVV A E  LD
Sbjct: 185  VEEKSEAAQESWESNGFDIPLPEVEKEVKLKEMPWQRHEKMVIRMVKKEKVVRADELGLD 244

Query: 1976 GILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQE 1797
             +LLERLR EAA IRKWVKVKKAGVTQAVVDQVHF+WRNNELALLKFD+PLC+NM RA+E
Sbjct: 245  EMLLERLRGEAATIRKWVKVKKAGVTQAVVDQVHFVWRNNELALLKFDLPLCRNMHRARE 304

Query: 1796 IVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNYQNTTTFA 1617
            IVEMKTGGVVVW NKDFLAVYRG  Y+SGSK+  N    S GD EN SSTMN+QNTTT A
Sbjct: 305  IVEMKTGGVVVWSNKDFLAVYRGCNYKSGSKNFWNKHGKSAGDEENFSSTMNHQNTTTVA 364

Query: 1616 RVSSDGSSLDDTIHGKD-KWESLQMASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLL 1440
            RVS DGS+LD+ IH KD +WESL M SLYEREADRLLDGLGPRFVDWWMQKPLPVD DLL
Sbjct: 365  RVSPDGSALDEMIHEKDGEWESLHMPSLYEREADRLLDGLGPRFVDWWMQKPLPVDADLL 424

Query: 1439 PELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLW 1260
            PELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLW
Sbjct: 425  PELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLW 484

Query: 1259 EKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVT 1080
            EKCHIAKIALKWG+PNTDNEQMANELK+LTGGVLLLRNK+LIILYRGKDF+PSEVA+ V 
Sbjct: 485  EKCHIAKIALKWGIPNTDNEQMANELKNLTGGVLLLRNKYLIILYRGKDFVPSEVAEAVA 544

Query: 1079 EREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIGNLKKDKTEV 900
            EREM LTRCQL+EE ARLKASE FSI+DE  ++SG+ GTLSEF  IHS+IGN KK +TE+
Sbjct: 545  EREMELTRCQLREETARLKASEAFSISDEDSVNSGIVGTLSEFQHIHSEIGNHKKRETEI 604

Query: 899  DVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEER 720
            +VQLEAE  RLEKELK+QERKL+ILKKKIEKSAK LEKLKNASRFSEQDPD+E+IS+EER
Sbjct: 605  EVQLEAERERLEKELKEQERKLYILKKKIEKSAKRLEKLKNASRFSEQDPDVEVISKEER 664

Query: 719  RCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVMYTAKRVEA 540
            +CLRE+GLK DSSL LGRRGVYDGVIEG+HQHWKHREIVKVITMQKK  QV++TAK +EA
Sbjct: 665  QCLREMGLKIDSSLVLGRRGVYDGVIEGIHQHWKHREIVKVITMQKKLLQVLHTAKCLEA 724

Query: 539  ESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQRLGSLKFFAH 360
            ESGGILV+++KLKEGHAII+YRGKNYKRPKSA  NLL+K+EALSRSLEIQRLGSLKFFA+
Sbjct: 725  ESGGILVNVIKLKEGHAIILYRGKNYKRPKSAAQNLLSKKEALSRSLEIQRLGSLKFFAN 784

Query: 359  QREQAIYDLKCKL 321
            QREQAI DLK +L
Sbjct: 785  QREQAICDLKSEL 797


>ref|XP_012854615.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Erythranthe guttata]
          Length = 782

 Score =  958 bits (2476), Expect = 0.0
 Identities = 497/679 (73%), Positives = 560/679 (82%), Gaps = 1/679 (0%)
 Frame = -2

Query: 2336 LTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAE 2157
            LTGKVGGARGKVAMKKI+KGIEKLQ+T ++EE  +  ENLKFKFAPG LWG+       E
Sbjct: 126  LTGKVGGARGKVAMKKIYKGIEKLQDTQNVEEPGKNLENLKFKFAPGALWGD-----KGE 180

Query: 2156 VQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVTAAESILD 1977
            V+E ++E + +L+  +FD+P            +PWE DE +VIRRV+KEKVVT+AES LD
Sbjct: 181  VEENTKEARWNLKIDDFDLPFGEAENEAKSKKMPWESDETVVIRRVQKEKVVTSAESSLD 240

Query: 1976 GILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQE 1797
             +LLERL+ EAA+IRKWVKVKKAGVTQ+VVDQV   WRNNELAL+ FD+PLC+NMDRA+E
Sbjct: 241  PVLLERLKEEAALIRKWVKVKKAGVTQSVVDQVSLFWRNNELALVNFDLPLCRNMDRARE 300

Query: 1796 IVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNYQNTTTFA 1617
            I+EMKTGG+VVW NK+FLAVYRG  Y+SG K  RNI                Y+NTT  A
Sbjct: 301  IIEMKTGGLVVWSNKEFLAVYRGCNYKSGPKQFRNI----------------YRNTTAIA 344

Query: 1616 RVSSDGSSLDDTIHGKDKWES-LQMASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLL 1440
            + S DG           +WES + M SLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLL
Sbjct: 345  QESCDGRD--------SEWESSIHMTSLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLL 396

Query: 1439 PELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLW 1260
            PE++PGFKTPFRL PP TR+K+TD ELTYLRKLARPLPTHFVLGRNRKLQGLA AILKLW
Sbjct: 397  PEVIPGFKTPFRLSPPSTRAKITDNELTYLRKLARPLPTHFVLGRNRKLQGLAVAILKLW 456

Query: 1259 EKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVT 1080
            EKCHIAKIA+KWGV NTDNEQMANELK LTGGVLLLRNKFLIILYRG DFLP EVAK+V 
Sbjct: 457  EKCHIAKIAVKWGVQNTDNEQMANELKDLTGGVLLLRNKFLIILYRGNDFLPPEVAKLVA 516

Query: 1079 EREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIGNLKKDKTEV 900
            EREM LT+CQL+EEAARLKAS+ FSITDE+  +SG  GTLSEFHSIHS+I   KK +TE 
Sbjct: 517  EREMELTKCQLEEEAARLKASKNFSITDENLNNSGFLGTLSEFHSIHSEISKEKKGETEF 576

Query: 899  DVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEER 720
             VQ+EAE  RLEKELK+QERKL ILKKKIEKSAKVL+KLKN S FS+QDPD+E ISEEER
Sbjct: 577  QVQVEAEKERLEKELKNQERKLSILKKKIEKSAKVLDKLKNESSFSKQDPDVETISEEER 636

Query: 719  RCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVMYTAKRVEA 540
              LRE+GLKSDS L LGRRGVYDGVIEGMHQHWKHREIVKVITMQKK S+V+YTAK VEA
Sbjct: 637  ELLREMGLKSDSCLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKLSRVLYTAKFVEA 696

Query: 539  ESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQRLGSLKFFAH 360
            ESGGILVSI+KLKEGHAIIVYRGKNYKRPK A++NLLNKREALS+S+EIQRLGSLKFFA 
Sbjct: 697  ESGGILVSILKLKEGHAIIVYRGKNYKRPKLASINLLNKREALSKSVEIQRLGSLKFFAS 756

Query: 359  QREQAIYDLKCKLADLSTK 303
             R+QAI DL+ KLA+L  K
Sbjct: 757  LRQQAIGDLRRKLAELLEK 775


>gb|EYU44617.1| hypothetical protein MIMGU_mgv1a026522mg, partial [Erythranthe
            guttata]
          Length = 702

 Score =  907 bits (2343), Expect = 0.0
 Identities = 477/673 (70%), Positives = 540/673 (80%), Gaps = 1/673 (0%)
 Frame = -2

Query: 2336 LTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAE 2157
            LTGKVGGARGKVAMKKI+KGIEKLQ+T ++EE  +  ENLKFKFAPG LWG+       E
Sbjct: 77   LTGKVGGARGKVAMKKIYKGIEKLQDTQNVEEPGKNLENLKFKFAPGALWGD-----KGE 131

Query: 2156 VQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVTAAESILD 1977
            V+E ++E + +L+  +FD+P            +PWE DE +VIRRV+KEKVVT+AES LD
Sbjct: 132  VEENTKEARWNLKIDDFDLPFGEAENEAKSKKMPWESDETVVIRRVQKEKVVTSAESSLD 191

Query: 1976 GILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQE 1797
             +LLERL+ EAA+IRKWVKVKKAGVTQ+VVDQV   WRNNELAL+ FD+PLC+NMDRA+E
Sbjct: 192  PVLLERLKEEAALIRKWVKVKKAGVTQSVVDQVSLFWRNNELALVNFDLPLCRNMDRARE 251

Query: 1796 IVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNYQNTTTFA 1617
            I+EMKTGG+VVW NK+FLAVYRG  Y+SG K  RNI                Y+NTT  A
Sbjct: 252  IIEMKTGGLVVWSNKEFLAVYRGCNYKSGPKQFRNI----------------YRNTTAIA 295

Query: 1616 RVSSDGSSLDDTIHGKDKWES-LQMASLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLL 1440
            + S DG           +WES + M SLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLL
Sbjct: 296  QESCDGRD--------SEWESSIHMTSLYEREADRLLDGLGPRFVDWWMQKPLPVDGDLL 347

Query: 1439 PELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLW 1260
            PE++PGFKTPFRL PP TR+K+TD ELTYLRKLARPLPTHFVLGRNRKLQGLA AILKLW
Sbjct: 348  PEVIPGFKTPFRLSPPSTRAKITDNELTYLRKLARPLPTHFVLGRNRKLQGLAVAILKLW 407

Query: 1259 EKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVAKVVT 1080
            EKCHIAKIA+KWGV NTDNEQMANELK+        RN          DFLP EVAK+V 
Sbjct: 408  EKCHIAKIAVKWGVQNTDNEQMANELKA--------RN----------DFLPPEVAKLVA 449

Query: 1079 EREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIGNLKKDKTEV 900
            EREM LT+CQL+EEAARLKAS+ FSITDE+  +SG  GTLSEFHSIHS+I   KK +TE 
Sbjct: 450  EREMELTKCQLEEEAARLKASKNFSITDENLNNSGFLGTLSEFHSIHSEISKEKKGETEF 509

Query: 899  DVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIISEEER 720
             VQ+EAE  RLEKELK+QERKL ILKKKIEKSAKVL+KLKN S FS+QDPD+E ISEEER
Sbjct: 510  QVQVEAEKERLEKELKNQERKLSILKKKIEKSAKVLDKLKNESSFSKQDPDVETISEEER 569

Query: 719  RCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVMYTAKRVEA 540
              LRE+GLKSDS L LGRRGVYDGVIEGMHQHWKHREIVKVITMQKK S+V+YTAK VEA
Sbjct: 570  ELLREMGLKSDSCLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKLSRVLYTAKFVEA 629

Query: 539  ESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQRLGSLKFFAH 360
            ESGGILVSI+KLKEGHAIIVYRGKNYKRPK A++NLLNKREALS+S+EIQRLGSLKFFA 
Sbjct: 630  ESGGILVSILKLKEGHAIIVYRGKNYKRPKLASINLLNKREALSKSVEIQRLGSLKFFAS 689

Query: 359  QREQAIYDLKCKL 321
             R+QAI DL+ KL
Sbjct: 690  LRQQAIGDLRRKL 702


>ref|XP_010316321.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Solanum lycopersicum]
            gi|723671956|ref|XP_010316322.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Solanum lycopersicum] gi|723671959|ref|XP_010316323.1|
            PREDICTED: chloroplastic group IIA intron splicing
            facilitator CRS1, chloroplastic [Solanum lycopersicum]
          Length = 802

 Score =  803 bits (2074), Expect = 0.0
 Identities = 429/689 (62%), Positives = 524/689 (76%), Gaps = 10/689 (1%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLK--FKFAPGDL--WGNGVY 2172
            AL+GKV G RGK AMK I++GI+KLQET  + E +Q   ++K  F+F PG L  WG+  Y
Sbjct: 116  ALSGKVSGGRGKKAMKMIYQGIDKLQETQ-IGECTQVETDVKVEFQFPPGSLSGWGDVSY 174

Query: 2171 ESDAEVQEYSEEVQL-SLESTEFDIPLAXXXXXXXXXXL---PWERDERMVIRRVKKEKV 2004
            E + E   Y EE  + SLE  EF +                 PWE +ER+V RR+KKEKV
Sbjct: 175  EIE-EKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKSGARMPWESEERIVYRRMKKEKV 233

Query: 2003 VTAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPL 1824
            V  AES LD +LLERLR EAA I+KWVKVKKAGVT+ VVDQ+ FIW+NNELA+LKFD+PL
Sbjct: 234  VRTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKFDLPL 293

Query: 1823 CQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTM 1644
            C+NMDRA++IVEMKTGG VVW  ++ L VYRG  Y   +  ++ ++ + +   +N S T 
Sbjct: 294  CRNMDRARDIVEMKTGGFVVWMKQNALVVYRGCSY---TLQLKELQHDFLRSHQNPSFTE 350

Query: 1643 NYQNTTTFARVSSDGSSLDDTIH-GKDKWESLQM-ASLYEREADRLLDGLGPRFVDWWMQ 1470
            N + T+ F+ ++  GSS D+ I  G  + +SL M  SLYEREA+RLLD LGPR+VDWW  
Sbjct: 351  NIEETSIFSPLNLSGSSEDEMISVGNSEEDSLVMNESLYEREANRLLDDLGPRYVDWWWP 410

Query: 1469 KPLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQ 1290
            KPLPVD DLLPE+VPGFK PFRLCPP +RSKLTD ELT LRKLAR LPTHFVLGRNRKLQ
Sbjct: 411  KPLPVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQ 470

Query: 1289 GLAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDF 1110
            GLAAA++KLWEKCHIAKIALKWG+PN  NE MANELK LTGGVLLLRNKF IILYRGKDF
Sbjct: 471  GLAAALVKLWEKCHIAKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRGKDF 530

Query: 1109 LPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDI 930
            LPS+VAK+V ERE+ LTRCQL+EE AR KA ET  IT E  + S + GTLSEF +    I
Sbjct: 531  LPSQVAKLVAEREVELTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEFQT----I 586

Query: 929  GNLKKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDP 750
                K+K+EV+VQL +E  RLEKE+++Q+  L+ILKKKIEKS+  L KL  A R +++D 
Sbjct: 587  AEPGKEKSEVEVQLMSEKERLEKEVRNQQDSLYILKKKIEKSSIALGKLNAAWRPAKEDD 646

Query: 749  DMEIISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQ 570
            D EI+++EERR LR+IGLK D SL LGRRGV+DGV+ G+HQHWKHRE++KVITMQK FSQ
Sbjct: 647  DKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQ 706

Query: 569  VMYTAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQ 390
            V++TAK +E ESGGIL+S+ K+KEGHAII+YRGKNY+RP+    NLLNKR+AL RSLE+Q
Sbjct: 707  VIHTAKLLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQ 766

Query: 389  RLGSLKFFAHQREQAIYDLKCKLADLSTK 303
            RLGSLKF+A+Q EQAI DLK KL + + K
Sbjct: 767  RLGSLKFYANQTEQAISDLKLKLVEYTVK 795


>ref|XP_009598916.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Nicotiana tomentosiformis]
            gi|697179889|ref|XP_009598917.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Nicotiana tomentosiformis]
          Length = 815

 Score =  802 bits (2072), Expect = 0.0
 Identities = 426/686 (62%), Positives = 516/686 (75%), Gaps = 7/686 (1%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEIS-QTPENLKFKFAPGDL--WGNGVYE 2169
            AL+GKV G RGK AMKKI++ I+KLQET +LE    +T    +F+F PG L  W +  ++
Sbjct: 124  ALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPGSLTHWKDVNFD 183

Query: 2168 SDAEVQEYSEEVQLSLESTEFDI---PLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVT 1998
             + +     ++    +E  EFDI                +PWE +ER V RR+KKEKV+T
Sbjct: 184  FNEQTPYVKKD---KVERVEFDILSRENEGRGNRRSGEKMPWESEERFVYRRMKKEKVLT 240

Query: 1997 AAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQ 1818
            AAE  LD +LLERLR EA  I+KWVKVKKAGVT+AVVDQ+H +W+NNELA+LKFD+PLC+
Sbjct: 241  AAELKLDAMLLERLRGEAVKIQKWVKVKKAGVTRAVVDQIHLLWKNNELAMLKFDLPLCR 300

Query: 1817 NMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNY 1638
            NMDRAQEI+EMKTGG VVWR K+ L VYRG  Y    K       + +  ++N+SST  +
Sbjct: 301  NMDRAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRHHDFLRSQQNNSSTYTF 360

Query: 1637 QNTTTFARVSSDGSSLDDTIHGKDKWESLQM-ASLYEREADRLLDGLGPRFVDWWMQKPL 1461
            + T+ F+  +S  SS+D       + +SL +  SLYEREA+RLLD LGPR+VDWW  KPL
Sbjct: 361  KKTSAFSSSNSSRSSVDVISGESSEEDSLTINESLYEREANRLLDDLGPRYVDWWWPKPL 420

Query: 1460 PVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLA 1281
            PVD DLLPE+VPGFK PFRLCPP +RSKLTD ELT+LRKLAR LPTHFVLGRNRKLQGLA
Sbjct: 421  PVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLA 480

Query: 1280 AAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPS 1101
            AAI+KLWEKCHIAKIALKWG+PNT+NE MANELK LTGGVLLLRNKF IILYRGKDFLPS
Sbjct: 481  AAIIKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPS 540

Query: 1100 EVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIGNL 921
            +VA +V ERE+ L RCQL+EEAAR KA ET  IT    +     GTLSEF +    I   
Sbjct: 541  QVASLVAEREVELRRCQLEEEAARFKAIETLPITTGESMSISNVGTLSEFQT----IAEP 596

Query: 920  KKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDME 741
             ++K+E +VQL AE  RLEKEL+D++  L+ILKKKIEKS+  L KL  A R ++ D D E
Sbjct: 597  GREKSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKE 656

Query: 740  IISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVMY 561
            I+++EERR LR+IGLK D SL LGRRGV+DGV+ G+HQHWKHRE+VKVITMQK FSQV++
Sbjct: 657  ILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIH 716

Query: 560  TAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQRLG 381
            TA  +EAESGGILVS+ KLKEGHAII+YRGKNY+RP+    NLLNKR ALSRSLE+QRLG
Sbjct: 717  TANLLEAESGGILVSVDKLKEGHAIIIYRGKNYRRPELVPQNLLNKRLALSRSLEMQRLG 776

Query: 380  SLKFFAHQREQAIYDLKCKLADLSTK 303
            SLKF+A+Q EQAI DLKCKL + + K
Sbjct: 777  SLKFYANQTEQAISDLKCKLVEYTVK 802


>ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Solanum tuberosum]
            gi|971569265|ref|XP_015169107.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Solanum tuberosum]
            gi|971569267|ref|XP_015169108.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Solanum tuberosum]
          Length = 802

 Score =  801 bits (2070), Expect = 0.0
 Identities = 431/688 (62%), Positives = 520/688 (75%), Gaps = 9/688 (1%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEIS-QTPENLKFKFAPGDL--WGNGVYE 2169
            AL+GKV G RGK AMK I++GI+KLQET   E    +T   ++F+F PG L  WG+  YE
Sbjct: 116  ALSGKVSGGRGKKAMKMIYQGIDKLQETQIGEGTQVETDAKVEFQFPPGSLSEWGDVSYE 175

Query: 2168 SDAEVQEYSEEVQL-SLESTEFDIPLAXXXXXXXXXXL---PWERDERMVIRRVKKEKVV 2001
             + E   Y EE  + SLE  EF +                 PWE + R+V RR+KKEKVV
Sbjct: 176  IE-EKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKIGVKMPWESEVRIVYRRMKKEKVV 234

Query: 2000 TAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLC 1821
              AES LD +LLERLR EAA I+KWVKVKKAGVT+ VVDQ+HFIW+NNELA+LKFD+PLC
Sbjct: 235  MTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIHFIWKNNELAMLKFDLPLC 294

Query: 1820 QNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMN 1641
            +NMDRA+EIVEMKTGG VVW  ++ L VYRG  Y    K +++   + +   +NSS T N
Sbjct: 295  RNMDRAREIVEMKTGGFVVWMKQNALVVYRGCSYTLQQKELQH---DFLCSHQNSSFTEN 351

Query: 1640 YQNTTTFARVSSDGSSLDDTIH-GKDKWESLQM-ASLYEREADRLLDGLGPRFVDWWMQK 1467
             + T+ F+ ++S GSS D+ I  G  + +SL M  SLY REA+RLLD LGPR+VDWW  K
Sbjct: 352  IKQTSIFSPLNSSGSSEDEMISVGNSEEDSLAMNESLYVREANRLLDDLGPRYVDWWWPK 411

Query: 1466 PLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQG 1287
            PLPV+ DLLPE+VPGFK PFRLCPP +RSKLTD ELT LRKLAR LPTHFVLGRNRKLQG
Sbjct: 412  PLPVNADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQG 471

Query: 1286 LAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFL 1107
            LAAA++KLWEKCHIAKIALKWG+PNT NE MANELK LTGGVLLLRNKF IILYRGKDFL
Sbjct: 472  LAAAVVKLWEKCHIAKIALKWGIPNTSNELMANELKYLTGGVLLLRNKFFIILYRGKDFL 531

Query: 1106 PSEVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIG 927
            PS+VA +V ERE+ LTRCQL+EE AR KA ET  IT E  + S   GTLSEF +    I 
Sbjct: 532  PSQVANLVAEREVELTRCQLEEEVARFKAIETLPITMEVSMSSSSVGTLSEFQT----IA 587

Query: 926  NLKKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPD 747
               K+K+EV+VQL +E  RLEKEL++Q+  L ILKKKIEKS+  L KL  A R +++D D
Sbjct: 588  EPGKEKSEVEVQLMSEKERLEKELRNQQNNLHILKKKIEKSSIALGKLNAAWRPAKEDDD 647

Query: 746  MEIISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQV 567
             EI+++EERR LR+IGLK D SL LGRRGV+DGV+ G+HQHWKHRE++KVITMQK FSQV
Sbjct: 648  KEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQV 707

Query: 566  MYTAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQR 387
            ++TAK +E ESGGIL+S+ K+KEGHAII+YRGKNY+RP+    NLLNKR+AL RSLE+QR
Sbjct: 708  IHTAKLLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQR 767

Query: 386  LGSLKFFAHQREQAIYDLKCKLADLSTK 303
            LGSLKF+A+Q EQAI DLK KL + + K
Sbjct: 768  LGSLKFYANQTEQAISDLKLKLVEYTVK 795


>ref|XP_009787271.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Nicotiana sylvestris]
          Length = 796

 Score =  799 bits (2063), Expect = 0.0
 Identities = 422/683 (61%), Positives = 515/683 (75%), Gaps = 4/683 (0%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEIS-QTPENLKFKFAPGDL--WGNGVYE 2169
            AL+GKV G RGK AMKKI++ I+KLQET +LE    +T    +F+F P  L  W +  ++
Sbjct: 109  ALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPASLSNWKDVNFQ 168

Query: 2168 SDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVTAAE 1989
             + +     ++    +E  EFDI L+          +PWE +ER+V RR+KKEKV+TAAE
Sbjct: 169  FNEQTPYVKKD---KVERVEFDI-LSGESEGRSGEKMPWESEERIVYRRMKKEKVLTAAE 224

Query: 1988 SILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMD 1809
              LD +LLERLR EA  I+KWVKVKKAGVTQ VV Q+H +W+NNELA+LKFD+PLC+NMD
Sbjct: 225  LKLDSVLLERLRGEAGQIQKWVKVKKAGVTQVVVHQIHLLWKNNELAMLKFDLPLCRNMD 284

Query: 1808 RAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNYQNT 1629
            RAQEI+EMKTGG VVWR K+ L VYRG  Y    K       + +  ++NSSST  ++ T
Sbjct: 285  RAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRLHDFLRSQQNSSSTDTFKKT 344

Query: 1628 TTFARVSSDGSSLDDTIHGKDKWESLQM-ASLYEREADRLLDGLGPRFVDWWMQKPLPVD 1452
            + F   +S  SS+D       + +SL +  SL+EREA+RLLD LGPR+VDWW  KPLPVD
Sbjct: 345  SAFLSSNSSRSSVDVISGESSEDDSLTINESLFEREANRLLDDLGPRYVDWWWPKPLPVD 404

Query: 1451 GDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAI 1272
             DLLPE+VPGFK PFRLCPP +RSKLTD ELT+LRKLAR LPTHFVLGRNRKLQGLAAA+
Sbjct: 405  ADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAV 464

Query: 1271 LKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVA 1092
            +KLWEKCHIAKIALKWG+PNT+NE MANELK LTGGVLLLRNKF IILYRGKDFLPS+VA
Sbjct: 465  IKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVA 524

Query: 1091 KVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIGNLKKD 912
             +V ERE+ L  CQL+EEAAR KA ET  IT    + S   GTLSEF +    I    ++
Sbjct: 525  SLVAEREVELRICQLEEEAARFKAIETLPITTGESMSSSNVGTLSEFQT----IAEPGRE 580

Query: 911  KTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIIS 732
            K+E +VQL AE  RLEKEL+D++  L+ILKKKIEKS+  L KL  A R ++ D D EI++
Sbjct: 581  KSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILT 640

Query: 731  EEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVMYTAK 552
            +EERR LR+IGLK D SL LGRRGV+DGV+ G+HQHWKHRE+VKVITMQK FS V++TA 
Sbjct: 641  QEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSHVIHTAN 700

Query: 551  RVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQRLGSLK 372
             +EAESGGILVS+ KLKEGHAI++YRGKNY+RP+    NLLNKR+ALSRSLE+QRLGSLK
Sbjct: 701  LLEAESGGILVSVDKLKEGHAIVIYRGKNYRRPELVPQNLLNKRQALSRSLEMQRLGSLK 760

Query: 371  FFAHQREQAIYDLKCKLADLSTK 303
            F+A+Q EQAI DLKCKL + + K
Sbjct: 761  FYANQTEQAISDLKCKLVEYTVK 783


>ref|XP_015065411.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Solanum pennellii]
          Length = 789

 Score =  798 bits (2062), Expect = 0.0
 Identities = 429/683 (62%), Positives = 519/683 (75%), Gaps = 10/683 (1%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLK--FKFAPGDL--WGNGVY 2172
            AL+GKV G RGK AMK I++GI+KLQET  + E +Q   ++K  F+F PG L  WG+  Y
Sbjct: 116  ALSGKVSGGRGKKAMKMIYQGIDKLQETQ-IGECTQVETDVKVEFQFPPGSLSEWGDVSY 174

Query: 2171 ESDAEVQEYSEEVQL-SLESTEFDIPLAXXXXXXXXXXL---PWERDERMVIRRVKKEKV 2004
            E + E   Y EE  + SLE  EF +                 PWE +ER+V RR+KKEKV
Sbjct: 175  EIE-EKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKSGARMPWESEERIVYRRMKKEKV 233

Query: 2003 VTAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPL 1824
            V  AES LD +LLERL+ EAA I+KWVKVKKAGVT+ VVDQ+ FIW+NNELA+LKFD+PL
Sbjct: 234  VMTAESNLDAMLLERLKGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKFDLPL 293

Query: 1823 CQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTM 1644
            C+NMDRA+EIVEMKTGG VVW  ++ L VYRG  Y    K +++   + +   +N S T 
Sbjct: 294  CRNMDRAREIVEMKTGGFVVWMKQNALVVYRGCSYTIQQKELQH---DFLCSHQNPSFTE 350

Query: 1643 NYQNTTTFARVSSDGSSLDDTIH-GKDKWESLQM-ASLYEREADRLLDGLGPRFVDWWMQ 1470
            N + T+ F+ ++  GSS D+ I  G  + +SL M  SLYEREA+RLLD LGPR+VDWW  
Sbjct: 351  NIEETSIFSPLNLSGSSEDEMISVGNSEEDSLVMNESLYEREANRLLDDLGPRYVDWWWP 410

Query: 1469 KPLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQ 1290
            KPLPVD DLLPE+VPGFK PFRLCPP +RSKLTD ELT LRKLAR LPTHFVLGRNRKLQ
Sbjct: 411  KPLPVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQ 470

Query: 1289 GLAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDF 1110
            GLAAA++KLWEKCHIAKIALKWG+PN  NE MANELK LTGGVLLLRNKF IILYRGKDF
Sbjct: 471  GLAAALVKLWEKCHIAKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRGKDF 530

Query: 1109 LPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDI 930
            LPS+VAK+V ERE+ LTRCQL+EE AR KA ET  IT E  + S + GTLSEF +    I
Sbjct: 531  LPSQVAKLVAEREVELTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEFQT----I 586

Query: 929  GNLKKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDP 750
                K+K+EV VQL +E  RLEKE+++Q+  L+ILKKKIEKS+  L KL  A R +++D 
Sbjct: 587  AEPGKEKSEVAVQLMSEKERLEKEVRNQQHSLYILKKKIEKSSIALGKLNAAWRPAKEDD 646

Query: 749  DMEIISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQ 570
            D EI+++EERR LR+IGLK D SL LGRRGV+DGV+ G+HQHWKHRE++KVITMQK FSQ
Sbjct: 647  DKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQ 706

Query: 569  VMYTAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQ 390
            V++TAK +E ESGGIL+S+ K+KEGHAII+YRGKNY+RP+    NLLNKR+AL RSLE+Q
Sbjct: 707  VIHTAKLLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQ 766

Query: 389  RLGSLKFFAHQREQAIYDLKCKL 321
            RLGSLKF+A+Q EQAI DLK KL
Sbjct: 767  RLGSLKFYANQTEQAISDLKLKL 789


>ref|XP_015065406.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Solanum pennellii]
            gi|970009085|ref|XP_015065407.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Solanum pennellii]
            gi|970009087|ref|XP_015065408.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Solanum pennellii]
            gi|970009089|ref|XP_015065409.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Solanum pennellii]
            gi|970009091|ref|XP_015065410.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Solanum pennellii]
          Length = 792

 Score =  798 bits (2062), Expect = 0.0
 Identities = 429/683 (62%), Positives = 519/683 (75%), Gaps = 10/683 (1%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLK--FKFAPGDL--WGNGVY 2172
            AL+GKV G RGK AMK I++GI+KLQET  + E +Q   ++K  F+F PG L  WG+  Y
Sbjct: 116  ALSGKVSGGRGKKAMKMIYQGIDKLQETQ-IGECTQVETDVKVEFQFPPGSLSEWGDVSY 174

Query: 2171 ESDAEVQEYSEEVQL-SLESTEFDIPLAXXXXXXXXXXL---PWERDERMVIRRVKKEKV 2004
            E + E   Y EE  + SLE  EF +                 PWE +ER+V RR+KKEKV
Sbjct: 175  EIE-EKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKSGARMPWESEERIVYRRMKKEKV 233

Query: 2003 VTAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPL 1824
            V  AES LD +LLERL+ EAA I+KWVKVKKAGVT+ VVDQ+ FIW+NNELA+LKFD+PL
Sbjct: 234  VMTAESNLDAMLLERLKGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKFDLPL 293

Query: 1823 CQNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTM 1644
            C+NMDRA+EIVEMKTGG VVW  ++ L VYRG  Y    K +++   + +   +N S T 
Sbjct: 294  CRNMDRAREIVEMKTGGFVVWMKQNALVVYRGCSYTIQQKELQH---DFLCSHQNPSFTE 350

Query: 1643 NYQNTTTFARVSSDGSSLDDTIH-GKDKWESLQM-ASLYEREADRLLDGLGPRFVDWWMQ 1470
            N + T+ F+ ++  GSS D+ I  G  + +SL M  SLYEREA+RLLD LGPR+VDWW  
Sbjct: 351  NIEETSIFSPLNLSGSSEDEMISVGNSEEDSLVMNESLYEREANRLLDDLGPRYVDWWWP 410

Query: 1469 KPLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQ 1290
            KPLPVD DLLPE+VPGFK PFRLCPP +RSKLTD ELT LRKLAR LPTHFVLGRNRKLQ
Sbjct: 411  KPLPVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQ 470

Query: 1289 GLAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDF 1110
            GLAAA++KLWEKCHIAKIALKWG+PN  NE MANELK LTGGVLLLRNKF IILYRGKDF
Sbjct: 471  GLAAALVKLWEKCHIAKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRGKDF 530

Query: 1109 LPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDI 930
            LPS+VAK+V ERE+ LTRCQL+EE AR KA ET  IT E  + S + GTLSEF +    I
Sbjct: 531  LPSQVAKLVAEREVELTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEFQT----I 586

Query: 929  GNLKKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDP 750
                K+K+EV VQL +E  RLEKE+++Q+  L+ILKKKIEKS+  L KL  A R +++D 
Sbjct: 587  AEPGKEKSEVAVQLMSEKERLEKEVRNQQHSLYILKKKIEKSSIALGKLNAAWRPAKEDD 646

Query: 749  DMEIISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQ 570
            D EI+++EERR LR+IGLK D SL LGRRGV+DGV+ G+HQHWKHRE++KVITMQK FSQ
Sbjct: 647  DKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQ 706

Query: 569  VMYTAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQ 390
            V++TAK +E ESGGIL+S+ K+KEGHAII+YRGKNY+RP+    NLLNKR+AL RSLE+Q
Sbjct: 707  VIHTAKLLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQ 766

Query: 389  RLGSLKFFAHQREQAIYDLKCKL 321
            RLGSLKF+A+Q EQAI DLK KL
Sbjct: 767  RLGSLKFYANQTEQAISDLKLKL 789


>ref|XP_009598920.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Nicotiana tomentosiformis]
          Length = 795

 Score =  798 bits (2061), Expect = 0.0
 Identities = 424/679 (62%), Positives = 512/679 (75%), Gaps = 7/679 (1%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEIS-QTPENLKFKFAPGDL--WGNGVYE 2169
            AL+GKV G RGK AMKKI++ I+KLQET +LE    +T    +F+F PG L  W +  ++
Sbjct: 124  ALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPGSLTHWKDVNFD 183

Query: 2168 SDAEVQEYSEEVQLSLESTEFDI---PLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVT 1998
             + +     ++    +E  EFDI                +PWE +ER V RR+KKEKV+T
Sbjct: 184  FNEQTPYVKKD---KVERVEFDILSRENEGRGNRRSGEKMPWESEERFVYRRMKKEKVLT 240

Query: 1997 AAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQ 1818
            AAE  LD +LLERLR EA  I+KWVKVKKAGVT+AVVDQ+H +W+NNELA+LKFD+PLC+
Sbjct: 241  AAELKLDAMLLERLRGEAVKIQKWVKVKKAGVTRAVVDQIHLLWKNNELAMLKFDLPLCR 300

Query: 1817 NMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNY 1638
            NMDRAQEI+EMKTGG VVWR K+ L VYRG  Y    K       + +  ++N+SST  +
Sbjct: 301  NMDRAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRHHDFLRSQQNNSSTYTF 360

Query: 1637 QNTTTFARVSSDGSSLDDTIHGKDKWESLQM-ASLYEREADRLLDGLGPRFVDWWMQKPL 1461
            + T+ F+  +S  SS+D       + +SL +  SLYEREA+RLLD LGPR+VDWW  KPL
Sbjct: 361  KKTSAFSSSNSSRSSVDVISGESSEEDSLTINESLYEREANRLLDDLGPRYVDWWWPKPL 420

Query: 1460 PVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLA 1281
            PVD DLLPE+VPGFK PFRLCPP +RSKLTD ELT+LRKLAR LPTHFVLGRNRKLQGLA
Sbjct: 421  PVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLA 480

Query: 1280 AAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPS 1101
            AAI+KLWEKCHIAKIALKWG+PNT+NE MANELK LTGGVLLLRNKF IILYRGKDFLPS
Sbjct: 481  AAIIKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPS 540

Query: 1100 EVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIGNL 921
            +VA +V ERE+ L RCQL+EEAAR KA ET  IT    +     GTLSEF +    I   
Sbjct: 541  QVASLVAEREVELRRCQLEEEAARFKAIETLPITTGESMSISNVGTLSEFQT----IAEP 596

Query: 920  KKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDME 741
             ++K+E +VQL AE  RLEKEL+D++  L+ILKKKIEKS+  L KL  A R ++ D D E
Sbjct: 597  GREKSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKE 656

Query: 740  IISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVMY 561
            I+++EERR LR+IGLK D SL LGRRGV+DGV+ G+HQHWKHRE+VKVITMQK FSQV++
Sbjct: 657  ILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIH 716

Query: 560  TAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQRLG 381
            TA  +EAESGGILVS+ KLKEGHAII+YRGKNY+RP+    NLLNKR ALSRSLE+QRLG
Sbjct: 717  TANLLEAESGGILVSVDKLKEGHAIIIYRGKNYRRPELVPQNLLNKRLALSRSLEMQRLG 776

Query: 380  SLKFFAHQREQAIYDLKCK 324
            SLKF+A+Q EQAI DLKCK
Sbjct: 777  SLKFYANQTEQAISDLKCK 795


>ref|XP_015169109.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Solanum tuberosum]
          Length = 788

 Score =  797 bits (2059), Expect = 0.0
 Identities = 429/681 (62%), Positives = 516/681 (75%), Gaps = 9/681 (1%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEIS-QTPENLKFKFAPGDL--WGNGVYE 2169
            AL+GKV G RGK AMK I++GI+KLQET   E    +T   ++F+F PG L  WG+  YE
Sbjct: 116  ALSGKVSGGRGKKAMKMIYQGIDKLQETQIGEGTQVETDAKVEFQFPPGSLSEWGDVSYE 175

Query: 2168 SDAEVQEYSEEVQL-SLESTEFDIPLAXXXXXXXXXXL---PWERDERMVIRRVKKEKVV 2001
             + E   Y EE  + SLE  EF +                 PWE + R+V RR+KKEKVV
Sbjct: 176  IE-EKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKIGVKMPWESEVRIVYRRMKKEKVV 234

Query: 2000 TAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLC 1821
              AES LD +LLERLR EAA I+KWVKVKKAGVT+ VVDQ+HFIW+NNELA+LKFD+PLC
Sbjct: 235  MTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIHFIWKNNELAMLKFDLPLC 294

Query: 1820 QNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMN 1641
            +NMDRA+EIVEMKTGG VVW  ++ L VYRG  Y    K +++   + +   +NSS T N
Sbjct: 295  RNMDRAREIVEMKTGGFVVWMKQNALVVYRGCSYTLQQKELQH---DFLCSHQNSSFTEN 351

Query: 1640 YQNTTTFARVSSDGSSLDDTIH-GKDKWESLQM-ASLYEREADRLLDGLGPRFVDWWMQK 1467
             + T+ F+ ++S GSS D+ I  G  + +SL M  SLY REA+RLLD LGPR+VDWW  K
Sbjct: 352  IKQTSIFSPLNSSGSSEDEMISVGNSEEDSLAMNESLYVREANRLLDDLGPRYVDWWWPK 411

Query: 1466 PLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQG 1287
            PLPV+ DLLPE+VPGFK PFRLCPP +RSKLTD ELT LRKLAR LPTHFVLGRNRKLQG
Sbjct: 412  PLPVNADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQG 471

Query: 1286 LAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFL 1107
            LAAA++KLWEKCHIAKIALKWG+PNT NE MANELK LTGGVLLLRNKF IILYRGKDFL
Sbjct: 472  LAAAVVKLWEKCHIAKIALKWGIPNTSNELMANELKYLTGGVLLLRNKFFIILYRGKDFL 531

Query: 1106 PSEVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIG 927
            PS+VA +V ERE+ LTRCQL+EE AR KA ET  IT E  + S   GTLSEF +    I 
Sbjct: 532  PSQVANLVAEREVELTRCQLEEEVARFKAIETLPITMEVSMSSSSVGTLSEFQT----IA 587

Query: 926  NLKKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPD 747
               K+K+EV+VQL +E  RLEKEL++Q+  L ILKKKIEKS+  L KL  A R +++D D
Sbjct: 588  EPGKEKSEVEVQLMSEKERLEKELRNQQNNLHILKKKIEKSSIALGKLNAAWRPAKEDDD 647

Query: 746  MEIISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQV 567
             EI+++EERR LR+IGLK D SL LGRRGV+DGV+ G+HQHWKHRE++KVITMQK FSQV
Sbjct: 648  KEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQV 707

Query: 566  MYTAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQR 387
            ++TAK +E ESGGIL+S+ K+KEGHAII+YRGKNY+RP+    NLLNKR+AL RSLE+QR
Sbjct: 708  IHTAKLLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQR 767

Query: 386  LGSLKFFAHQREQAIYDLKCK 324
            LGSLKF+A+Q EQAI DLK K
Sbjct: 768  LGSLKFYANQTEQAISDLKLK 788


>ref|XP_009787273.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Nicotiana sylvestris]
          Length = 776

 Score =  795 bits (2052), Expect = 0.0
 Identities = 420/676 (62%), Positives = 511/676 (75%), Gaps = 4/676 (0%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEIS-QTPENLKFKFAPGDL--WGNGVYE 2169
            AL+GKV G RGK AMKKI++ I+KLQET +LE    +T    +F+F P  L  W +  ++
Sbjct: 109  ALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPASLSNWKDVNFQ 168

Query: 2168 SDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVTAAE 1989
             + +     ++    +E  EFDI L+          +PWE +ER+V RR+KKEKV+TAAE
Sbjct: 169  FNEQTPYVKKD---KVERVEFDI-LSGESEGRSGEKMPWESEERIVYRRMKKEKVLTAAE 224

Query: 1988 SILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMD 1809
              LD +LLERLR EA  I+KWVKVKKAGVTQ VV Q+H +W+NNELA+LKFD+PLC+NMD
Sbjct: 225  LKLDSVLLERLRGEAGQIQKWVKVKKAGVTQVVVHQIHLLWKNNELAMLKFDLPLCRNMD 284

Query: 1808 RAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNYQNT 1629
            RAQEI+EMKTGG VVWR K+ L VYRG  Y    K       + +  ++NSSST  ++ T
Sbjct: 285  RAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRLHDFLRSQQNSSSTDTFKKT 344

Query: 1628 TTFARVSSDGSSLDDTIHGKDKWESLQM-ASLYEREADRLLDGLGPRFVDWWMQKPLPVD 1452
            + F   +S  SS+D       + +SL +  SL+EREA+RLLD LGPR+VDWW  KPLPVD
Sbjct: 345  SAFLSSNSSRSSVDVISGESSEDDSLTINESLFEREANRLLDDLGPRYVDWWWPKPLPVD 404

Query: 1451 GDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAI 1272
             DLLPE+VPGFK PFRLCPP +RSKLTD ELT+LRKLAR LPTHFVLGRNRKLQGLAAA+
Sbjct: 405  ADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAV 464

Query: 1271 LKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVA 1092
            +KLWEKCHIAKIALKWG+PNT+NE MANELK LTGGVLLLRNKF IILYRGKDFLPS+VA
Sbjct: 465  IKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVA 524

Query: 1091 KVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIGNLKKD 912
             +V ERE+ L  CQL+EEAAR KA ET  IT    + S   GTLSEF +    I    ++
Sbjct: 525  SLVAEREVELRICQLEEEAARFKAIETLPITTGESMSSSNVGTLSEFQT----IAEPGRE 580

Query: 911  KTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIIS 732
            K+E +VQL AE  RLEKEL+D++  L+ILKKKIEKS+  L KL  A R ++ D D EI++
Sbjct: 581  KSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILT 640

Query: 731  EEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVMYTAK 552
            +EERR LR+IGLK D SL LGRRGV+DGV+ G+HQHWKHRE+VKVITMQK FS V++TA 
Sbjct: 641  QEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSHVIHTAN 700

Query: 551  RVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQRLGSLK 372
             +EAESGGILVS+ KLKEGHAI++YRGKNY+RP+    NLLNKR+ALSRSLE+QRLGSLK
Sbjct: 701  LLEAESGGILVSVDKLKEGHAIVIYRGKNYRRPELVPQNLLNKRQALSRSLEMQRLGSLK 760

Query: 371  FFAHQREQAIYDLKCK 324
            F+A+Q EQAI DLKCK
Sbjct: 761  FYANQTEQAISDLKCK 776


>emb|CDP02762.1| unnamed protein product [Coffea canephora]
          Length = 826

 Score =  779 bits (2011), Expect = 0.0
 Identities = 424/682 (62%), Positives = 506/682 (74%), Gaps = 9/682 (1%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNG----VY 2172
            ALTGK+G  RGK  MKKIFKGI+KLQ++  LE+  + PE +KF F+PG+L G G    V 
Sbjct: 127  ALTGKMGAGRGKKEMKKIFKGIKKLQDSKSLEKTHKKPEMVKFIFSPGELPGGGDSAYVE 186

Query: 2171 ESDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXL---PWERDERMVIRRVKKEKVV 2001
               +E ++   + Q  +E +E    L               PW+R E++V  +VKKEKVV
Sbjct: 187  GLISEREDEKMDAQKIVEESEVGFQLGKVEGEGKAKFGGKMPWDRGEKLVTWKVKKEKVV 246

Query: 2000 TAAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLC 1821
            TAAE  LD  LL+RLR+EA+ +RKWVKV KAGVTQ VV +VH IW+NNELA+LKFD+PLC
Sbjct: 247  TAAELSLDEELLDRLRDEASRMRKWVKVMKAGVTQEVVHRVHAIWKNNELAMLKFDLPLC 306

Query: 1820 QNMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMN 1641
            +NMDRAQEI+EMKTGGVVVWR +  L +YRG  Y S  K               +S    
Sbjct: 307  RNMDRAQEILEMKTGGVVVWRKQHALVIYRGGNYLSALK---------------TSFDNC 351

Query: 1640 YQNTTTFARVSSDGSSLDDTIHGKDKWES--LQMASLYEREADRLLDGLGPRFVDWWMQK 1467
             ++T     V+S    L   +   DK E   L   SLYE+EADRLLDGLGPRF DWW +K
Sbjct: 352  CRDTIITFEVNSSEHGLVGMMSKMDKKEENVLMNGSLYEKEADRLLDGLGPRFYDWWWRK 411

Query: 1466 PLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQG 1287
            PLPVDGDLL E+VPGF  PFRLCPP  RS+LTD ELTYLRKLARPLPTHFVLGRNRKLQG
Sbjct: 412  PLPVDGDLLREVVPGFMPPFRLCPPHARSQLTDDELTYLRKLARPLPTHFVLGRNRKLQG 471

Query: 1286 LAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFL 1107
            LAAAILKLWEKCHIAKIA+KWGVPNTDN+QMA ELK LTGG+LLLRNKFLIILYRGKDFL
Sbjct: 472  LAAAILKLWEKCHIAKIAIKWGVPNTDNKQMAYELKCLTGGILLLRNKFLIILYRGKDFL 531

Query: 1106 PSEVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIG 927
            PS VA++VT REM LT CQL EE+ARL+ASET   T      S  +GTLSEF  I S   
Sbjct: 532  PSRVAELVTIREMELTECQLMEESARLRASET--ATQIPSSKSANSGTLSEFLRIQSKHL 589

Query: 926  NLKKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPD 747
             L    ++ +V+LEAE  +LE+EL+DQ+RKLF+LKKKIEKSAK L  L +  R +E+D D
Sbjct: 590  GLGHGNSKAEVELEAEKEQLERELRDQQRKLFLLKKKIEKSAKRLADLNSLWRPAERDTD 649

Query: 746  MEIISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQV 567
             E++++EER CLR++GLK  SSL LGRRGV++GVIE +HQ+WKHREIVKVITMQK FSQV
Sbjct: 650  QEMLTQEERECLRKMGLKMVSSLVLGRRGVFNGVIESLHQYWKHREIVKVITMQKMFSQV 709

Query: 566  MYTAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQR 387
            +YTAK +EAESGGILVS+ K KEGH+II+YRGKNY+RPK A LNL ++REALSRSLE+QR
Sbjct: 710  VYTAKFLEAESGGILVSVDKHKEGHSIILYRGKNYRRPKLAPLNLPSRREALSRSLEMQR 769

Query: 386  LGSLKFFAHQREQAIYDLKCKL 321
            +GSLKFFA QREQ + DL+ KL
Sbjct: 770  IGSLKFFARQREQMVSDLQFKL 791


>ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Vitis vinifera]
            gi|731417745|ref|XP_010660412.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Vitis vinifera]
          Length = 828

 Score =  779 bits (2011), Expect = 0.0
 Identities = 415/695 (59%), Positives = 499/695 (71%), Gaps = 19/695 (2%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDA 2160
            +LT KV G RG  AMKKI + I KLQETH  +E  +  E  +F                 
Sbjct: 115  SLTEKVSGGRGAKAMKKIMQSIVKLQETHTSDETQENTEEFEFG---------------- 158

Query: 2159 EVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVTAAESIL 1980
                      +SLE    D              +PW + E++V RR KKEKVVTAAE  L
Sbjct: 159  ----------VSLEGIGGD------ENSRIGGKMPWLKTEKVVFRRTKKEKVVTAAELTL 202

Query: 1979 DGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQ 1800
            D +LLERLR EA  +RKWVKVKKAGVT++VVDQ+H +W+++ELA++KFD+PLC+NMDRA+
Sbjct: 203  DPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAR 262

Query: 1799 EIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMN---YQNT 1629
            EI+E+KT G+V+W  KD L VYRG  Y+S SKH + +R   V   + S+S +N   +++ 
Sbjct: 263  EILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDD 322

Query: 1628 TTFARVSSDGSSLDDTIHGKDKWESLQMA---------------SLYEREADRLLDGLGP 1494
             T + +    S+  + +  KD  E                    SLYEREADRLLDGLGP
Sbjct: 323  LTISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGP 382

Query: 1493 RFVDWWMQKPLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFV 1314
            RF+DWW  KPLPVD DLLPE++PGF+ PFRL PP TRSKLTD ELTYLRKLA  LPTHFV
Sbjct: 383  RFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFV 442

Query: 1313 LGRNRKLQGLAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLI 1134
            LGRNRKLQGLAAAILKLWEK  I KIA+KWG+PNT NEQMANELK LTGGVLLLRNKF I
Sbjct: 443  LGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFI 502

Query: 1133 ILYRGKDFLPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSE 954
            ILYRGKDFLP  VA ++ EREM    CQ++EE ARLKA ET  +TD+   ++   GTLSE
Sbjct: 503  ILYRGKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIETSFVTDKPLANTSTTGTLSE 562

Query: 953  FHSIHSDIGNLKKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNA 774
            F +I ++   LK   TE++V+LEAE  RLEKELK QER LFILK+KIE+SAKVL KL +A
Sbjct: 563  FQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKRKIERSAKVLAKLNSA 622

Query: 773  SRFSEQDPDMEIISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVI 594
             R ++ D D E+I+EEER C R+IG K DSSL LGRRGV+DGVIEG+HQHWKHREIVKVI
Sbjct: 623  WRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVI 682

Query: 593  TMQKKFSQVMYTAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRP-KSATLNLLNKRE 417
            TMQ+ FSQV+YTAK +E+ESGG+LVSI KLKEGHAII+YRGKNY+RP K    NLL KRE
Sbjct: 683  TMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKRE 742

Query: 416  ALSRSLEIQRLGSLKFFAHQREQAIYDLKCKLADL 312
            AL+RSLE+QR+GSLKFFA+QR+QAI DLK KLADL
Sbjct: 743  ALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLADL 777


>ref|XP_009598918.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Nicotiana tomentosiformis]
          Length = 804

 Score =  776 bits (2004), Expect = 0.0
 Identities = 418/686 (60%), Positives = 506/686 (73%), Gaps = 7/686 (1%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEIS-QTPENLKFKFAPGDL--WGNGVYE 2169
            AL+GKV G RGK AMKKI++ I+KLQET +LE    +T    +F+F PG L  W +  ++
Sbjct: 124  ALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPGSLTHWKDVNFD 183

Query: 2168 SDAEVQEYSEEVQLSLESTEFDI---PLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVT 1998
             + +     ++    +E  EFDI                +PWE +ER V RR+KKEKV+T
Sbjct: 184  FNEQTPYVKKD---KVERVEFDILSRENEGRGNRRSGEKMPWESEERFVYRRMKKEKVLT 240

Query: 1997 AAESILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQ 1818
            AAE  LD +LLERLR EA  I+KWVKVKKAGVT+AVVDQ+H +W+NNELA+LKFD+PLC+
Sbjct: 241  AAELKLDAMLLERLRGEAVKIQKWVKVKKAGVTRAVVDQIHLLWKNNELAMLKFDLPLCR 300

Query: 1817 NMDRAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNY 1638
            NMDRAQEI+EMKTGG VVWR K+ L VYRG  Y    K       + +  ++N+SST  +
Sbjct: 301  NMDRAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRHHDFLRSQQNNSSTYTF 360

Query: 1637 QNTTTFARVSSDGSSLDDTIHGKDKWESLQM-ASLYEREADRLLDGLGPRFVDWWMQKPL 1461
            + T+ F+  +S  SS+D       + +SL +  SLYEREA+RLLD LGPR+VDWW  KPL
Sbjct: 361  KKTSAFSSSNSSRSSVDVISGESSEEDSLTINESLYEREANRLLDDLGPRYVDWWWPKPL 420

Query: 1460 PVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLA 1281
            PVD DLLPE+VPGFK PFRLCPP +RSKLTD ELT+LRKLAR LPTHFVLGRNRKLQGLA
Sbjct: 421  PVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLA 480

Query: 1280 AAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPS 1101
            AAI+KLWEKCHIAKIALKWG+PNT+NE MANELK LTGGVLLLRNKF IILYRGKDFLPS
Sbjct: 481  AAIIKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPS 540

Query: 1100 EVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIGNL 921
            +VA +V ERE+ L RCQL+EEAAR KA ET  IT    +     GTLSEF +    I   
Sbjct: 541  QVASLVAEREVELRRCQLEEEAARFKAIETLPITTGESMSISNVGTLSEFQT----IAEP 596

Query: 920  KKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDME 741
             ++K+E +VQL AE  RLEKEL+D++  L+ILKKKIEKS+  L KL  A R ++ D D E
Sbjct: 597  GREKSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKE 656

Query: 740  IISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVMY 561
            I+++EERR LR+IGLK D SL L           G+HQHWKHRE+VKVITMQK FSQV++
Sbjct: 657  ILTQEERRSLRQIGLKMDRSLVL-----------GLHQHWKHREVVKVITMQKIFSQVIH 705

Query: 560  TAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQRLG 381
            TA  +EAESGGILVS+ KLKEGHAII+YRGKNY+RP+    NLLNKR ALSRSLE+QRLG
Sbjct: 706  TANLLEAESGGILVSVDKLKEGHAIIIYRGKNYRRPELVPQNLLNKRLALSRSLEMQRLG 765

Query: 380  SLKFFAHQREQAIYDLKCKLADLSTK 303
            SLKF+A+Q EQAI DLKCKL + + K
Sbjct: 766  SLKFYANQTEQAISDLKCKLVEYTVK 791


>ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Vitis vinifera]
          Length = 789

 Score =  773 bits (1997), Expect = 0.0
 Identities = 412/692 (59%), Positives = 496/692 (71%), Gaps = 19/692 (2%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDA 2160
            +LT KV G RG  AMKKI + I KLQETH  +E  +  E  +F                 
Sbjct: 115  SLTEKVSGGRGAKAMKKIMQSIVKLQETHTSDETQENTEEFEFG---------------- 158

Query: 2159 EVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVTAAESIL 1980
                      +SLE    D              +PW + E++V RR KKEKVVTAAE  L
Sbjct: 159  ----------VSLEGIGGD------ENSRIGGKMPWLKTEKVVFRRTKKEKVVTAAELTL 202

Query: 1979 DGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQ 1800
            D +LLERLR EA  +RKWVKVKKAGVT++VVDQ+H +W+++ELA++KFD+PLC+NMDRA+
Sbjct: 203  DPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAR 262

Query: 1799 EIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMN---YQNT 1629
            EI+E+KT G+V+W  KD L VYRG  Y+S SKH + +R   V   + S+S +N   +++ 
Sbjct: 263  EILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDD 322

Query: 1628 TTFARVSSDGSSLDDTIHGKDKWESLQMA---------------SLYEREADRLLDGLGP 1494
             T + +    S+  + +  KD  E                    SLYEREADRLLDGLGP
Sbjct: 323  LTISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGP 382

Query: 1493 RFVDWWMQKPLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFV 1314
            RF+DWW  KPLPVD DLLPE++PGF+ PFRL PP TRSKLTD ELTYLRKLA  LPTHFV
Sbjct: 383  RFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFV 442

Query: 1313 LGRNRKLQGLAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLI 1134
            LGRNRKLQGLAAAILKLWEK  I KIA+KWG+PNT NEQMANELK LTGGVLLLRNKF I
Sbjct: 443  LGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFI 502

Query: 1133 ILYRGKDFLPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSE 954
            ILYRGKDFLP  VA ++ EREM    CQ++EE ARLKA ET  +TD+   ++   GTLSE
Sbjct: 503  ILYRGKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIETSFVTDKPLANTSTTGTLSE 562

Query: 953  FHSIHSDIGNLKKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNA 774
            F +I ++   LK   TE++V+LEAE  RLEKELK QER LFILK+KIE+SAKVL KL +A
Sbjct: 563  FQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKRKIERSAKVLAKLNSA 622

Query: 773  SRFSEQDPDMEIISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVI 594
             R ++ D D E+I+EEER C R+IG K DSSL LGRRGV+DGVIEG+HQHWKHREIVKVI
Sbjct: 623  WRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVI 682

Query: 593  TMQKKFSQVMYTAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRP-KSATLNLLNKRE 417
            TMQ+ FSQV+YTAK +E+ESGG+LVSI KLKEGHAII+YRGKNY+RP K    NLL KRE
Sbjct: 683  TMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKRE 742

Query: 416  ALSRSLEIQRLGSLKFFAHQREQAIYDLKCKL 321
            AL+RSLE+QR+GSLKFFA+QR+QAI DLK KL
Sbjct: 743  ALNRSLEMQRIGSLKFFAYQRQQAISDLKLKL 774


>ref|XP_009787272.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Nicotiana sylvestris]
          Length = 785

 Score =  773 bits (1995), Expect = 0.0
 Identities = 414/683 (60%), Positives = 505/683 (73%), Gaps = 4/683 (0%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEIS-QTPENLKFKFAPGDL--WGNGVYE 2169
            AL+GKV G RGK AMKKI++ I+KLQET +LE    +T    +F+F P  L  W +  ++
Sbjct: 109  ALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPASLSNWKDVNFQ 168

Query: 2168 SDAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVTAAE 1989
             + +     ++    +E  EFDI L+          +PWE +ER+V RR+KKEKV+TAAE
Sbjct: 169  FNEQTPYVKKD---KVERVEFDI-LSGESEGRSGEKMPWESEERIVYRRMKKEKVLTAAE 224

Query: 1988 SILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMD 1809
              LD +LLERLR EA  I+KWVKVKKAGVTQ VV Q+H +W+NNELA+LKFD+PLC+NMD
Sbjct: 225  LKLDSVLLERLRGEAGQIQKWVKVKKAGVTQVVVHQIHLLWKNNELAMLKFDLPLCRNMD 284

Query: 1808 RAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNYQNT 1629
            RAQEI+EMKTGG VVWR K+ L VYRG  Y    K       + +  ++NSSST  ++ T
Sbjct: 285  RAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRLHDFLRSQQNSSSTDTFKKT 344

Query: 1628 TTFARVSSDGSSLDDTIHGKDKWESLQM-ASLYEREADRLLDGLGPRFVDWWMQKPLPVD 1452
            + F   +S  SS+D       + +SL +  SL+EREA+RLLD LGPR+VDWW  KPLPVD
Sbjct: 345  SAFLSSNSSRSSVDVISGESSEDDSLTINESLFEREANRLLDDLGPRYVDWWWPKPLPVD 404

Query: 1451 GDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAI 1272
             DLLPE+VPGFK PFRLCPP +RSKLTD ELT+LRKLAR LPTHFVLGRNRKLQGLAAA+
Sbjct: 405  ADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAV 464

Query: 1271 LKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEVA 1092
            +KLWEKCHIAKIALKWG+PNT+NE MANELK LTGGVLLLRNKF IILYRGKDFLPS+VA
Sbjct: 465  IKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVA 524

Query: 1091 KVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIGNLKKD 912
             +V ERE+ L  CQL+EEAAR KA ET  IT    + S   GTLSEF +    I    ++
Sbjct: 525  SLVAEREVELRICQLEEEAARFKAIETLPITTGESMSSSNVGTLSEFQT----IAEPGRE 580

Query: 911  KTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEIIS 732
            K+E +VQL AE  RLEKEL+D++  L+ILKKKIEKS+  L KL  A R ++ D D EI++
Sbjct: 581  KSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILT 640

Query: 731  EEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVMYTAK 552
            +EERR LR+IGLK D SL L           G+HQHWKHRE+VKVITMQK FS V++TA 
Sbjct: 641  QEERRSLRQIGLKMDRSLVL-----------GLHQHWKHREVVKVITMQKIFSHVIHTAN 689

Query: 551  RVEAESGGILVSIVKLKEGHAIIVYRGKNYKRPKSATLNLLNKREALSRSLEIQRLGSLK 372
             +EAESGGILVS+ KLKEGHAI++YRGKNY+RP+    NLLNKR+ALSRSLE+QRLGSLK
Sbjct: 690  LLEAESGGILVSVDKLKEGHAIVIYRGKNYRRPELVPQNLLNKRQALSRSLEMQRLGSLK 749

Query: 371  FFAHQREQAIYDLKCKLADLSTK 303
            F+A+Q EQAI DLKCKL + + K
Sbjct: 750  FYANQTEQAISDLKCKLVEYTVK 772


>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Citrus sinensis]
            gi|985454472|ref|XP_015387056.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Citrus sinensis] gi|985454474|ref|XP_015387057.1|
            PREDICTED: chloroplastic group IIA intron splicing
            facilitator CRS1, chloroplastic [Citrus sinensis]
          Length = 771

 Score =  736 bits (1900), Expect = 0.0
 Identities = 402/691 (58%), Positives = 492/691 (71%), Gaps = 16/691 (2%)
 Frame = -2

Query: 2336 LTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYESDAE 2157
            LT K  G RGK AMKKI + IEKLQ+   L+E +Q     KF+F        G +E +  
Sbjct: 91   LTAKESGVRGKQAMKKIIENIEKLQKDQILDE-TQKKVMEKFEF-------KGCFEENVS 142

Query: 2156 VQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXLPWERDERMVIRRVKKEKVVTAAESILD 1977
             +E                             +PW R++R V RR+KKE++VT AE++LD
Sbjct: 143  HEE--------------------DLRGGFGGKVPWLREDRFVFRRMKKERMVTKAETMLD 182

Query: 1976 GILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMDRAQE 1797
            G LLERL++EA  +RKWVKVKKAGVT++VV ++   WR NELA++KFD+PLC+NMDRA+E
Sbjct: 183  GELLERLKDEARKMRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFDVPLCRNMDRARE 242

Query: 1796 IVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRE---NSSSTMNYQNTT 1626
            I+E+KTGG+V+W  KD   VYRG      SK    +   S  D+E   + S+ ++ +   
Sbjct: 243  ILELKTGGLVIWTKKDAHVVYRG----DSSKSSVKMCPRSADDQEAPLSKSTHLHLEKKV 298

Query: 1625 TFARVSSDGSSLDDTIHGKDKWE-----SLQM-------ASLYEREADRLLDGLGPRFVD 1482
              + + S+ ++LD     KD  E     S+ M        SLYERE DRLLDGLGPRFVD
Sbjct: 299  NVSWIKSNTATLDQNRSLKDGEENSLPTSIFMDKNLRIDKSLYEREGDRLLDGLGPRFVD 358

Query: 1481 WWMQKPLPVDGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRN 1302
            WWM KPLPVDGDLLPE+VPGFK PFRL PP  RSKLTD ELTYLRKLA PLPTHFVLGRN
Sbjct: 359  WWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDARSKLTDDELTYLRKLAHPLPTHFVLGRN 418

Query: 1301 RKLQGLAAAILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYR 1122
            R LQGLA AILKLWEK  +AKI +KWG+PNTDNEQMANELK LTGGVLLLRNKFLIILYR
Sbjct: 419  RGLQGLATAILKLWEKSLVAKITVKWGIPNTDNEQMANELKHLTGGVLLLRNKFLIILYR 478

Query: 1121 GKDFLPSEVAKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSI 942
            G DFLP  V  ++ ERE  L  CQ  EE ARLKA ETF +  E    +  AGTLSEF +I
Sbjct: 479  GNDFLPCGVENLIVERERELQICQNHEEGARLKAIETFHLPHEPLEKTSKAGTLSEFQNI 538

Query: 941  HSDIGNLKKDKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFS 762
             SD G+LK    E ++QLEAE   LE+EL+ QERKLFIL  KIEKSAK L +L +A +  
Sbjct: 539  QSDFGDLKMGNREFELQLEAEIEDLERELRKQERKLFILNIKIEKSAKELSRLNSAWKPR 598

Query: 761  EQDPDMEIISEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQK 582
            EQDPD+E+I+EEER+CL +IG+K +S+L LGRRGV+DGVIEG+HQHWK+RE+ +VIT QK
Sbjct: 599  EQDPDLEMITEEERQCLHKIGMKMNSNLLLGRRGVFDGVIEGLHQHWKYREVARVITKQK 658

Query: 581  KFSQVMYTAKRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRP-KSATLNLLNKREALSR 405
             F+QV+YTAK + AESGGIL+S+ KLKEGHAII+YRGKNY+RP K  T NLL+KR+AL R
Sbjct: 659  LFAQVIYTAKSLVAESGGILISVDKLKEGHAIIIYRGKNYRRPLKLMTQNLLSKRQALRR 718

Query: 404  SLEIQRLGSLKFFAHQREQAIYDLKCKLADL 312
            SLE+QRLGSLKFFA+QR++ I +LK KLA+L
Sbjct: 719  SLEMQRLGSLKFFAYQRQRVISNLKIKLAEL 749


>ref|XP_012491296.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Gossypium raimondii]
            gi|763775949|gb|KJB43072.1| hypothetical protein
            B456_007G182400 [Gossypium raimondii]
          Length = 734

 Score =  733 bits (1891), Expect = 0.0
 Identities = 401/682 (58%), Positives = 486/682 (71%), Gaps = 6/682 (0%)
 Frame = -2

Query: 2339 ALTGKVGGARGKVAMKKIFKGIEKLQETHDLEEISQTPENLKFKFAPGDLWGNGVYE--S 2166
            AL GK  G RGK  MKKI + +EKLQ    L++      N   KF   ++ GN + E  S
Sbjct: 87   ALFGKESGVRGKKVMKKIIRDVEKLQGNGVLDD------NQIGKFEEFEI-GNWLEEIGS 139

Query: 2165 DAEVQEYSEEVQLSLESTEFDIPLAXXXXXXXXXXLPWERDE-RMVIRRVKKEKVVTAAE 1989
            D EV+++  ++                         PW R+E ++V RR+KKEKV+T AE
Sbjct: 140  DGEVKKFDRKM-------------------------PWVREEEKVVFRRMKKEKVLTQAE 174

Query: 1988 SILDGILLERLRNEAAMIRKWVKVKKAGVTQAVVDQVHFIWRNNELALLKFDIPLCQNMD 1809
             ILD  LLERLR +A  +RKWVKV KAGVTQAVVD++  +WRNNEL +LKF +PLC+NMD
Sbjct: 175  IILDNDLLERLRKKAMRMRKWVKVMKAGVTQAVVDEIRLVWRNNELVMLKFGVPLCRNMD 234

Query: 1808 RAQEIVEMKTGGVVVWRNKDFLAVYRGRIYESGSKHIRNIRRNSVGDRENSSSTMNYQNT 1629
            RA EIVEMKTGG+VVW  KD L VYRG+ +   S   R +  N   D           N 
Sbjct: 235  RASEIVEMKTGGLVVWCKKDVLVVYRGQNHWLTSNG-RRVFNNLASD-----------NN 282

Query: 1628 TTFARVSSDGSSLDDTIHGKDKWESLQ--MASLYEREADRLLDGLGPRFVDWWMQKPLPV 1455
            TT ++  S+ S+   +++G+D+ E+ Q  + SLYERE DRLLDGLGPRF+DWWM+KPLPV
Sbjct: 283  TTMSQEKSNASTWGRSLNGEDRDENNQPVVGSLYERETDRLLDGLGPRFIDWWMRKPLPV 342

Query: 1454 DGDLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAA 1275
            D DLLPE+VPGF+ P RL PP TR KLTD ELT LRKLA PLP HF LGRNR LQGLA A
Sbjct: 343  DADLLPEVVPGFRPPTRLSPPKTRPKLTDEELTNLRKLAHPLPFHFALGRNRNLQGLANA 402

Query: 1274 ILKLWEKCHIAKIALKWGVPNTDNEQMANELKSLTGGVLLLRNKFLIILYRGKDFLPSEV 1095
            ILKLWEK  IAKIA+KWG  NTDNEQMANELK LTGGVLLLRNKFLII YRGKDFLP  V
Sbjct: 403  ILKLWEKSLIAKIAIKWGAQNTDNEQMANELKDLTGGVLLLRNKFLIIFYRGKDFLPQGV 462

Query: 1094 AKVVTEREMILTRCQLQEEAARLKASETFSITDEHFLDSGVAGTLSEFHSIHSDIGNLKK 915
            A  V EREM L RCQL EE AR+K +ETF + +E    +   GTL+EF  I +  G L+K
Sbjct: 463  ANSVMEREMALRRCQLIEEDARVKVAETFQVANEPLAKTSTVGTLAEFQDIQTKYGVLEK 522

Query: 914  DKTEVDVQLEAENARLEKELKDQERKLFILKKKIEKSAKVLEKLKNASRFSEQDPDMEII 735
            +  E+++Q+EA+   LE+EL++QERKL IL  KIEKSA  L KL ++ + +E D D+E I
Sbjct: 523  ENNELEIQIEAQKENLERELRNQERKLAILNGKIEKSATKLAKLNSSWQTAEPDLDLETI 582

Query: 734  SEEERRCLREIGLKSDSSLELGRRGVYDGVIEGMHQHWKHREIVKVITMQKKFSQVMYTA 555
            +EEER CLR+IGLK  S L LGRRGV++GVIEG+HQHWKHRE+VKVITMQ+ F +V+YTA
Sbjct: 583  TEEERECLRKIGLKLSSCLFLGRRGVFNGVIEGVHQHWKHREVVKVITMQRAFLRVIYTA 642

Query: 554  KRVEAESGGILVSIVKLKEGHAIIVYRGKNYKRP-KSATLNLLNKREALSRSLEIQRLGS 378
            K + AESGGILVS+ KLKEGHAII+YRGKNY+RP K  T +LL KREAL RS+E+QR+GS
Sbjct: 643  KMLVAESGGILVSVEKLKEGHAIIIYRGKNYRRPSKLMTDHLLTKREALQRSIELQRIGS 702

Query: 377  LKFFAHQREQAIYDLKCKLADL 312
            LKFFA+QR QAI DLK KLA L
Sbjct: 703  LKFFAYQRRQAILDLKLKLAKL 724