BLASTX nr result
ID: Rehmannia28_contig00023470
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00023470
(1069 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009144507.1| RNA polymerase beta subunit (chloroplast) [R... 68 1e-19
gb|AHE41632.1| RNA polymerase beta subunit protein, partial (chl... 67 1e-19
ref|YP_009232034.1| RNA polymerase beta subunit (chloroplast) [L... 68 3e-19
gb|AKZ23853.1| RNA polymerase beta subunit (plastid) [Salvia nem... 68 3e-19
gb|ADK89855.1| RNA polymerase beta subunit (chloroplast) [Crithm... 68 3e-19
ref|YP_009114227.1| RNA polymerase beta subunit (chloroplast) [S... 66 3e-19
ref|YP_009191932.1| RNA polymerase beta subunit (chloroplast) [P... 68 4e-19
ref|YP_086958.1| RNA polymerase beta subunit [Panax ginseng] gi|... 68 4e-19
ref|YP_009121165.1| RNA polymerase beta subunit (chloroplast) [P... 68 4e-19
gb|ALI91102.1| RpoB, partial (chloroplast) [Rhaphiostylis ferrug... 68 4e-19
gb|AKJ77736.1| RNA polymerase beta subunit (chloroplast) [Perill... 68 4e-19
gb|AKZ23857.1| RNA polymerase beta subunit (plastid) [Verbascum ... 68 4e-19
gb|AKZ23854.1| RNA polymerase beta subunit (plastid) [Nepeta cat... 68 4e-19
gb|ADD31187.1| RNA polymerase beta subunit protein (chloroplast)... 68 4e-19
ref|YP_008964026.1| RNA polymerase beta subunit [Ajuga reptans] ... 68 4e-19
ref|YP_004935658.1| RNA polymerase beta subunit (chloroplast) [S... 68 4e-19
ref|YP_009232906.1| RpoB (chloroplast) [Angelica gigas] gi|98274... 68 5e-19
ref|YP_009155286.1| RNA polymerase beta subunit (plastid) [Sesel... 68 5e-19
ref|YP_398851.1| RNA polymerase beta subunit [Nicotiana tomentos... 69 5e-19
gb|AKS03608.1| RNA polymerase beta subunit (chloroplast) [Corian... 68 5e-19
>ref|YP_009144507.1| RNA polymerase beta subunit (chloroplast) [Rosmarinus officinalis]
gi|827345134|gb|AKJ76718.1| RNA polymerase beta subunit
(chloroplast) [Rosmarinus officinalis]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 1e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 57.8 bits (138), Expect(2) = 1e-19
Identities = 35/61 (57%), Positives = 39/61 (63%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ F KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLE-AHFLRNLNKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>gb|AHE41632.1| RNA polymerase beta subunit protein, partial (chloroplast)
[Myriophyllum verticillatum]
Length = 960
Score = 66.6 bits (161), Expect(2) = 1e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLRTI IQ+STSK+T LKL +G R
Sbjct: 628 VGKLTPQMVKESSYAPEDRLLRTILGIQVSTSKETCLKLPIGRR 671
Score = 58.5 bits (140), Expect(2) = 1e-19
Identities = 34/61 (55%), Positives = 40/61 (65%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SFDI KYEI+T +TSQGP R EIPHL+ + KN IVMLG
Sbjct: 560 VLISERLVYEDIYTSFDIRKYEIQTHMTSQGPERITNEIPHLE-VYLLRNLDKNGIVMLG 618
Query: 669 S 671
S
Sbjct: 619 S 619
>ref|YP_009232034.1| RNA polymerase beta subunit (chloroplast) [Lavandula angustifolia]
gi|977902043|gb|AMA20325.1| RNA polymerase beta subunit
(chloroplast) [Lavandula angustifolia]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 3e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 56.2 bits (134), Expect(2) = 3e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRN-LNKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>gb|AKZ23853.1| RNA polymerase beta subunit (plastid) [Salvia nemorosa]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 3e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 56.2 bits (134), Expect(2) = 3e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRN-LNKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>gb|ADK89855.1| RNA polymerase beta subunit (chloroplast) [Crithmum maritimum]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 3e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 56.2 bits (134), Expect(2) = 3e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T +TSQGP R EIPHLK KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIKTHLTSQGPERVTKEIPHLKAHLLRN-LDKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>ref|YP_009114227.1| RNA polymerase beta subunit (chloroplast) [Sedum takesimense]
gi|586598441|gb|AHJ61223.1| RNA polymerase beta subunit
(chloroplast) [Sedum takesimense]
Length = 1070
Score = 66.2 bits (160), Expect(2) = 3e-19
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQM K+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 57.8 bits (138), Expect(2) = 3e-19
Identities = 35/61 (57%), Positives = 39/61 (63%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+TQVTSQGP R EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIQTQVTSQGPERITNEIPHLEAHLLRN-LDKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>ref|YP_009191932.1| RNA polymerase beta subunit (chloroplast) [Panax vietnamensis]
gi|806639828|gb|AKB99238.1| RNA polymerase beta subunit
(chloroplast) [Panax vietnamensis]
gi|806639916|gb|AKB99325.1| RNA polymerase beta subunit
(chloroplast) [Panax vietnamensis]
Length = 1071
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 740 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 783
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 672 VLISERLVYEDIYTSFHIRKYEIKTHVTSQGPERVTNEIPHLEAHLLRN-LDKNGIVMLG 730
Query: 669 S 671
S
Sbjct: 731 S 731
>ref|YP_086958.1| RNA polymerase beta subunit [Panax ginseng]
gi|68053101|sp|Q68S14.1|RPOB_PANGI RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|51235305|gb|AAT98501.1| RNA polymerase beta subunit
(chloroplast) [Panax ginseng]
Length = 1071
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 740 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 783
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 672 VLISERLVYEDIYTSFHIRKYEIKTHVTSQGPERVTNEIPHLEAHLLRN-LDKNGIVMLG 730
Query: 669 S 671
S
Sbjct: 731 S 731
>ref|YP_009121165.1| RNA polymerase beta subunit (chloroplast) [Panax notoginseng]
gi|884997637|ref|YP_009155420.1| RpoB (chloroplast)
[Panax quinquefolius] gi|966201660|ref|YP_009191845.1|
RNA polymerase beta subunit (chloroplast) [Panax
japonicus] gi|506444453|gb|AGM15015.1| RNA polymerase
beta subunit (chloroplast) [Panax ginseng]
gi|506444541|gb|AGM15101.1| RNA polymerase beta subunit
(chloroplast) [Panax ginseng]
gi|506444657|gb|AGM15187.1| RNA polymerase beta subunit
(chloroplast) [Panax ginseng]
gi|545484755|gb|AGW31947.1| RNA polymerase beta subunit
(chloroplast) [Panax ginseng]
gi|638920724|gb|AIA24319.1| RNA polymerase beta subunit
(chloroplast) [Panax notoginseng]
gi|723604094|gb|AIX97881.1| RpoB (chloroplast) [Panax
ginseng] gi|723604182|gb|AIX97968.1| RpoB (chloroplast)
[Panax ginseng] gi|723604266|gb|AIX98051.1| RpoB
(chloroplast) [Panax ginseng]
gi|723604352|gb|AIX98136.1| RpoB (chloroplast) [Panax
ginseng] gi|723604438|gb|AIX98221.1| RpoB (chloroplast)
[Panax ginseng] gi|723604524|gb|AIX98306.1| RpoB
(chloroplast) [Panax ginseng]
gi|723604610|gb|AIX98391.1| RpoB (chloroplast) [Panax
ginseng] gi|723604696|gb|AIX98476.1| RpoB (chloroplast)
[Panax ginseng] gi|723604782|gb|AIX98561.1| RpoB
(chloroplast) [Panax ginseng]
gi|744671688|gb|AJC99480.1| RpoB (chloroplast) [Panax
quinquefolius] gi|744671799|gb|AJC99565.1| RpoB
(chloroplast) [Panax ginseng]
gi|744671907|gb|AJC99650.1| RpoB (chloroplast) [Panax
ginseng] gi|806639652|gb|AKB99064.1| RNA polymerase beta
subunit (chloroplast) [Panax notoginseng]
gi|806639740|gb|AKB99151.1| RNA polymerase beta subunit
(chloroplast) [Panax japonicus]
gi|818214033|gb|AKG26592.1| RNA polymerase beta subunit
(chloroplast) [Panax notoginseng]
gi|913021604|gb|AKU70767.1| RNA polymerase beta subunit
(chloroplast) [Panax notoginseng]
gi|917544156|gb|AKZ29738.1| RNA polymerase beta subunit
(chloroplast) [Panax quinquefolius]
Length = 1071
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 740 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 783
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 672 VLISERLVYEDIYTSFHIRKYEIKTHVTSQGPERVTNEIPHLEAHLLRN-LDKNGIVMLG 730
Query: 669 S 671
S
Sbjct: 731 S 731
>gb|ALI91102.1| RpoB, partial (chloroplast) [Rhaphiostylis ferruginea]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIKTHVTSQGPERVTNEIPHLEAHLLRN-LDKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>gb|AKJ77736.1| RNA polymerase beta subunit (chloroplast) [Perilla frutescens]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRN-LDKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>gb|AKZ23857.1| RNA polymerase beta subunit (plastid) [Verbascum thapsus]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRN-LDKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>gb|AKZ23854.1| RNA polymerase beta subunit (plastid) [Nepeta cataria]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRN-LDKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>gb|ADD31187.1| RNA polymerase beta subunit protein (chloroplast) [Aucuba japonica]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIKTHVTSQGPERVTNEIPHLEAHLLRN-LDKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>ref|YP_008964026.1| RNA polymerase beta subunit [Ajuga reptans]
gi|558697183|gb|AHA84938.1| RNA polymerase beta subunit
[Ajuga reptans]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRN-LDKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>ref|YP_004935658.1| RNA polymerase beta subunit (chloroplast) [Sesamum indicum]
gi|347448287|gb|AEO92698.1| RNA polymerase beta subunit
(chloroplast) [Sesamum indicum]
gi|496538593|gb|AGL45328.1| RpoB (chloroplast) [Sesamum
indicum]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRN-LDKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>ref|YP_009232906.1| RpoB (chloroplast) [Angelica gigas] gi|982743886|gb|AMA98019.1|
RpoB (chloroplast) [Angelica gigas]
Length = 1072
Score = 67.8 bits (164), Expect(2) = 5e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 741 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 784
Score = 55.5 bits (132), Expect(2) = 5e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 673 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERVTKEIPHLEAHLLRN-LDKNGIVMLG 731
Query: 669 S 671
S
Sbjct: 732 S 732
>ref|YP_009155286.1| RNA polymerase beta subunit (plastid) [Seseli montanum]
gi|700746336|gb|AIU99094.1| RNA polymerase beta subunit
(plastid) [Seseli montanum]
Length = 1071
Score = 67.8 bits (164), Expect(2) = 5e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 740 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 783
Score = 55.5 bits (132), Expect(2) = 5e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 672 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERVTKEIPHLEAHLLRN-LDKNGIVMLG 730
Query: 669 S 671
S
Sbjct: 731 S 731
>ref|YP_398851.1| RNA polymerase beta subunit [Nicotiana tomentosiformis]
gi|88909146|sp|Q33C46.1|RPOB_NICTO RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|80750913|dbj|BAE47989.1| RNA polymerase beta subunit
[Nicotiana tomentosiformis]
Length = 1070
Score = 68.9 bits (167), Expect(2) = 5e-19
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQ+VK+S YAPEDRLLR I IQ+STSK+T LKLL+GGR
Sbjct: 739 VGKLTPQVVKESSYAPEDRLLRAILGIQVSTSKETCLKLLIGGR 782
Score = 54.3 bits (129), Expect(2) = 5e-19
Identities = 33/61 (54%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP + EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPEKVTNEIPHLEAHLLRN-LDKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730
>gb|AKS03608.1| RNA polymerase beta subunit (chloroplast) [Coriandrum sativum]
Length = 1070
Score = 67.8 bits (164), Expect(2) = 5e-19
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 691 VGKLTPQMVKDSLYAPEDRLLRTIYNIQLSTSKDTRLKLLMGGR 822
VGKLTPQMVK+S YAPEDRLLR I IQ+STSK+T LKL +GGR
Sbjct: 739 VGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGR 782
Score = 55.5 bits (132), Expect(2) = 5e-19
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +3
Query: 489 VQIIEI*VYQDAHASFDILKYEIRTQVTSQGPGRFPYEIPHLKPICFTL*TKKNRIVMLG 668
V I E VY+D + SF I KYEI+T VTSQGP R EIPHL+ KN IVMLG
Sbjct: 671 VLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERVTKEIPHLEAHLLRN-LDKNGIVMLG 729
Query: 669 S 671
S
Sbjct: 730 S 730