BLASTX nr result
ID: Rehmannia28_contig00023403
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia28_contig00023403 (697 letters) Database: ./nr 84,704,028 sequences; 31,038,470,784 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_011097607.1| PREDICTED: regulation of nuclear pre-mRNA do... 94 8e-19 emb|CDP20800.1| unnamed protein product [Coffea canephora] 73 2e-11 emb|CBI21475.3| unnamed protein product [Vitis vinifera] 71 1e-10 >ref|XP_011097607.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1B-like [Sesamum indicum] Length = 525 Score = 94.4 bits (233), Expect = 8e-19 Identities = 73/216 (33%), Positives = 83/216 (38%), Gaps = 37/216 (17%) Frame = +2 Query: 2 DQTSKKSXXXXXXXXXXXXXXSTSSQYIMTSVLST------------------------F 109 +QTSKKS S+SSQYIMTSVLST F Sbjct: 310 EQTSKKSAAAIAAEVADKLAASSSSQYIMTSVLSTFAAEEAKNAGLTTSSTSTTSFSLSF 369 Query: 110 AAEEAKNAGXXXXXXXXXXXPAXXXXXXXXXXXXXXXXX----GQISNSQSHYLSNPNPP 277 + +K+ P GQIS+SQ+HY S PNP Sbjct: 370 NSPMSKSENLRPISDPNVFMPPQLTPPQNNPYQSIVVPQPSIPGQISSSQAHYHSIPNPT 429 Query: 278 SLQYMQPPGGITGPYDXXXXXXXXXXXXXXXXXXXXXXXXIQQPQQMLTMGH-------- 433 SLQYMQP GGI G YD + QQ LTMGH Sbjct: 430 SLQYMQPSGGIAGSYDYGSLPPLPPGPPPPAPPSFMVSPMVPLMQQPLTMGHQQSTLAQQ 489 Query: 434 -XXXXXXXXXXXXXFRPLVPVQAPGMVYYTHPYRSQ 538 FRPL P+QAPGMVYYTHPY+SQ Sbjct: 490 QSIPISQPPPGPAGFRPLAPMQAPGMVYYTHPYQSQ 525 >emb|CDP20800.1| unnamed protein product [Coffea canephora] Length = 494 Score = 72.8 bits (177), Expect = 2e-11 Identities = 57/181 (31%), Positives = 70/181 (38%), Gaps = 3/181 (1%) Frame = +2 Query: 5 QTSKKSXXXXXXXXXXXXXXSTSSQYIMTSVLSTFAAEEAKNAGXXXXXXXXXXXPAXXX 184 QT+KK+ S+SSQYIM+SVLSTFAAE+ KNAG PA Sbjct: 315 QTTKKTTAAIAAEVADMLAASSSSQYIMSSVLSTFAAEQEKNAGLTKSSTASTPYPALPN 374 Query: 185 XXXXXXXXXXXXXXGQ--ISNSQSHYLSNPNPPSLQYMQPPGGITGPYDXXXXXXXXXXX 358 I+NSQ+ Y PPS QY+QP GG Y Sbjct: 375 NATKNSEIKAEGTMLDPIITNSQAQYHLLSTPPSQQYIQPSGGTLSSYAYGSFPPLPPGP 434 Query: 359 XXXXXXXXXXXXXIQQPQQMLTMGHXXXXXXXXXXXXXFRPLVPVQAP-GMVYYTHPYRS 535 + Q H FRP+ P+Q P GMVYY HP+ + Sbjct: 435 PPPPPPPAYMMSPMTPLTQQQLQQH-TVPLPPPPPGPSFRPVAPMQQPTGMVYYAHPHHT 493 Query: 536 Q 538 Q Sbjct: 494 Q 494 >emb|CBI21475.3| unnamed protein product [Vitis vinifera] Length = 473 Score = 70.9 bits (172), Expect = 1e-10 Identities = 59/178 (33%), Positives = 65/178 (36%) Frame = +2 Query: 5 QTSKKSXXXXXXXXXXXXXXSTSSQYIMTSVLSTFAAEEAKNAGXXXXXXXXXXXPAXXX 184 Q SK++ S+SSQ IMTSVLSTFAAEEAKNAG Sbjct: 313 QASKRTAADIAAEVADKLTASSSSQLIMTSVLSTFAAEEAKNAGLTKTSTVSNSFTPMPS 372 Query: 185 XXXXXXXXXXXXXXGQISNSQSHYLSNPNPPSLQYMQPPGGITGPYDXXXXXXXXXXXXX 364 SQ+ Y PNPPS QY+QP GGI PY Sbjct: 373 NSKPENSM-------PTPTSQTQYHMLPNPPSQQYLQPSGGIMNPYGYGSIPPLPPGPPP 425 Query: 365 XXXXXXXXXXXIQQPQQMLTMGHXXXXXXXXXXXXXFRPLVPVQAPGMVYYTHPYRSQ 538 PQQ FRPL Q PGMVYY P+ SQ Sbjct: 426 PPSTLHMVNPMAPLPQQQ-------SIPLQPPAPPSFRPL---QLPGMVYYGLPHHSQ 473