BLASTX nr result

ID: Rehmannia28_contig00023403 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00023403
         (697 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097607.1| PREDICTED: regulation of nuclear pre-mRNA do...    94   8e-19
emb|CDP20800.1| unnamed protein product [Coffea canephora]             73   2e-11
emb|CBI21475.3| unnamed protein product [Vitis vinifera]               71   1e-10

>ref|XP_011097607.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
           1B-like [Sesamum indicum]
          Length = 525

 Score = 94.4 bits (233), Expect = 8e-19
 Identities = 73/216 (33%), Positives = 83/216 (38%), Gaps = 37/216 (17%)
 Frame = +2

Query: 2   DQTSKKSXXXXXXXXXXXXXXSTSSQYIMTSVLST------------------------F 109
           +QTSKKS              S+SSQYIMTSVLST                        F
Sbjct: 310 EQTSKKSAAAIAAEVADKLAASSSSQYIMTSVLSTFAAEEAKNAGLTTSSTSTTSFSLSF 369

Query: 110 AAEEAKNAGXXXXXXXXXXXPAXXXXXXXXXXXXXXXXX----GQISNSQSHYLSNPNPP 277
            +  +K+             P                      GQIS+SQ+HY S PNP 
Sbjct: 370 NSPMSKSENLRPISDPNVFMPPQLTPPQNNPYQSIVVPQPSIPGQISSSQAHYHSIPNPT 429

Query: 278 SLQYMQPPGGITGPYDXXXXXXXXXXXXXXXXXXXXXXXXIQQPQQMLTMGH-------- 433
           SLQYMQP GGI G YD                        +   QQ LTMGH        
Sbjct: 430 SLQYMQPSGGIAGSYDYGSLPPLPPGPPPPAPPSFMVSPMVPLMQQPLTMGHQQSTLAQQ 489

Query: 434 -XXXXXXXXXXXXXFRPLVPVQAPGMVYYTHPYRSQ 538
                         FRPL P+QAPGMVYYTHPY+SQ
Sbjct: 490 QSIPISQPPPGPAGFRPLAPMQAPGMVYYTHPYQSQ 525


>emb|CDP20800.1| unnamed protein product [Coffea canephora]
          Length = 494

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 57/181 (31%), Positives = 70/181 (38%), Gaps = 3/181 (1%)
 Frame = +2

Query: 5   QTSKKSXXXXXXXXXXXXXXSTSSQYIMTSVLSTFAAEEAKNAGXXXXXXXXXXXPAXXX 184
           QT+KK+              S+SSQYIM+SVLSTFAAE+ KNAG           PA   
Sbjct: 315 QTTKKTTAAIAAEVADMLAASSSSQYIMSSVLSTFAAEQEKNAGLTKSSTASTPYPALPN 374

Query: 185 XXXXXXXXXXXXXXGQ--ISNSQSHYLSNPNPPSLQYMQPPGGITGPYDXXXXXXXXXXX 358
                             I+NSQ+ Y     PPS QY+QP GG    Y            
Sbjct: 375 NATKNSEIKAEGTMLDPIITNSQAQYHLLSTPPSQQYIQPSGGTLSSYAYGSFPPLPPGP 434

Query: 359 XXXXXXXXXXXXXIQQPQQMLTMGHXXXXXXXXXXXXXFRPLVPVQAP-GMVYYTHPYRS 535
                        +    Q     H             FRP+ P+Q P GMVYY HP+ +
Sbjct: 435 PPPPPPPAYMMSPMTPLTQQQLQQH-TVPLPPPPPGPSFRPVAPMQQPTGMVYYAHPHHT 493

Query: 536 Q 538
           Q
Sbjct: 494 Q 494


>emb|CBI21475.3| unnamed protein product [Vitis vinifera]
          Length = 473

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 59/178 (33%), Positives = 65/178 (36%)
 Frame = +2

Query: 5   QTSKKSXXXXXXXXXXXXXXSTSSQYIMTSVLSTFAAEEAKNAGXXXXXXXXXXXPAXXX 184
           Q SK++              S+SSQ IMTSVLSTFAAEEAKNAG                
Sbjct: 313 QASKRTAADIAAEVADKLTASSSSQLIMTSVLSTFAAEEAKNAGLTKTSTVSNSFTPMPS 372

Query: 185 XXXXXXXXXXXXXXGQISNSQSHYLSNPNPPSLQYMQPPGGITGPYDXXXXXXXXXXXXX 364
                              SQ+ Y   PNPPS QY+QP GGI  PY              
Sbjct: 373 NSKPENSM-------PTPTSQTQYHMLPNPPSQQYLQPSGGIMNPYGYGSIPPLPPGPPP 425

Query: 365 XXXXXXXXXXXIQQPQQMLTMGHXXXXXXXXXXXXXFRPLVPVQAPGMVYYTHPYRSQ 538
                         PQQ                   FRPL   Q PGMVYY  P+ SQ
Sbjct: 426 PPSTLHMVNPMAPLPQQQ-------SIPLQPPAPPSFRPL---QLPGMVYYGLPHHSQ 473


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