BLASTX nr result

ID: Rehmannia28_contig00023400 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00023400
         (462 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011094927.1| PREDICTED: putative DEAD-box ATP-dependent R...    96   9e-21

>ref|XP_011094927.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33 [Sesamum
           indicum]
          Length = 337

 Score = 95.5 bits (236), Expect = 9e-21
 Identities = 62/138 (44%), Positives = 78/138 (56%), Gaps = 39/138 (28%)
 Frame = -2

Query: 458 EEDSGPAPISGNVPQTGLRRKKGEYKNSISS-----KGGNVNRFEPRSLEGVAKEGENWN 294
           EEDSGP PI  +V + G RRK G  KNS+SS     KGGNV+ F+ RSL GVA++ E+ +
Sbjct: 200 EEDSGPNPIRESVGKIGARRK-GYSKNSMSSSGGSDKGGNVSDFKSRSLVGVAEDRESGD 258

Query: 293 YNGNLRKKGSKKTYLS----------------------------------SHKKGENVNS 216
           + G +RKKGS +TYLS                                  S  + EN+NS
Sbjct: 259 FKGKVRKKGSTRTYLSDSEGMNSGDVGFGSRNAGRNSRLAGTAREFWRSKSDAEEENMNS 318

Query: 215 EVFDMNLQNDGTYGFELE 162
           EVF M+LQNDG+YGFELE
Sbjct: 319 EVFYMSLQNDGSYGFELE 336


Top