BLASTX nr result

ID: Rehmannia28_contig00022458 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00022458
         (919 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP17911.1| unnamed protein product [Coffea canephora]             72   9e-11
ref|XP_015064433.1| PREDICTED: F-box/kelch-repeat protein At3g23...    61   4e-07
ref|XP_009762231.1| PREDICTED: F-box protein At3g08750-like [Nic...    60   8e-07
ref|XP_004233113.2| PREDICTED: F-box/kelch-repeat protein At3g23...    60   8e-07
ref|XP_009799847.1| PREDICTED: F-box/kelch-repeat protein At3g23...    59   2e-06
ref|XP_009627941.1| PREDICTED: F-box/kelch-repeat protein At3g23...    59   3e-06

>emb|CDP17911.1| unnamed protein product [Coffea canephora]
          Length = 419

 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 39/107 (36%), Positives = 59/107 (55%)
 Frame = -3

Query: 908 LVCTKDNERVKSLDGWVFDDGEQIWRKDYTFGPIEVNMDRLLWCSKNGKILGERADGKLF 729
           LV +   ER   +D  V+D+G+  W      GPI + M+R + CSK+G IL E  +G LF
Sbjct: 302 LVYSPTRERDDFVDVVVYDEGKGRWDTKSCHGPIGLKMERHMQCSKDGVILAETPEGTLF 361

Query: 728 VFDPKTGCVKFLFYAARPPQSFQIYRYAESLSYIEGMRQVNARRKRK 588
           ++DP T  +K    A     S++ + Y ESL  ++GM +V  + K K
Sbjct: 362 LYDPVTNAIKEFRIAEAMKTSYEAFSYTESLVSLKGMEKVKEQDKDK 408


>ref|XP_015064433.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           pennellii]
          Length = 426

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
 Frame = -3

Query: 917 LGGLVCTKDNERVKS--LDGWVFDDGEQIWRKDYTFGPIEVNMDRLLWCSKNGKILGERA 744
           L G +C  D +      +D WV DD +  W K Y+ GP+ V  DR+L C +NG I+ +  
Sbjct: 291 LEGSLCMLDWDHKDDCHMDVWVMDDVDG-WSKKYSVGPL-VGFDRILGCLRNGDIVAKNE 348

Query: 743 DGKLFVFDPKTGCVKFLFYAAR-PPQSFQIYRYAESLSYIEGM---RQVNARRKRKRKMV 576
           +G +F+ DP T  VK  F       +S+ I  Y+ESL  I GM   ++ +A+ K  RK V
Sbjct: 349 NGVIFLCDPITNSVKENFSIDNSKDESYVIVDYSESLFLIGGMLPVKKQDAQDKLARKKV 408


>ref|XP_009762231.1| PREDICTED: F-box protein At3g08750-like [Nicotiana sylvestris]
          Length = 418

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
 Frame = -3

Query: 899 TKDNERVKSLDGWVFDDGEQIWRKDYTFGPIEVNMDRLLWCSKNGKILGERADGKLFVFD 720
           T D       D WV DD E  W K Y  GPI   ++R + C +NG I+ +  + ++F+FD
Sbjct: 300 TFDERDESHFDVWVMDD-EDGWTKKYNVGPIH-GLERTMGCLRNGDIVAKNKEEEVFLFD 357

Query: 719 PKTGCVKF-LFYAARPPQSFQIYRYAESLSYIEGM---RQVNARRKRKRKMVDDA 567
           P T  VK  L   +    ++ I+ Y+ESL    GM   ++ NAR K  RK +  A
Sbjct: 358 PVTCSVKANLSIDSSKNGAYMIFDYSESLMLTGGMLPVKKQNARDKLARKKLTRA 412


>ref|XP_004233113.2| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           lycopersicum]
          Length = 426

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
 Frame = -3

Query: 917 LGGLVCTKDNERVKS--LDGWVFDDGEQIWRKDYTFGPIEVNMDRLLWCSKNGKILGERA 744
           L G +C  D +      +D WV DD +  W K Y+ GP+ V  DR+L C +NG I+ +  
Sbjct: 291 LEGSLCMLDWDHKDDCHMDVWVMDDVDG-WSKKYSVGPL-VGFDRILGCLRNGDIVVKNE 348

Query: 743 DGKLFVFDPKTGCVKFLFYAAR-PPQSFQIYRYAESLSYIEGM---RQVNARRKRKRKMV 576
           +G +F+ DP T  VK  F       +S+ +  Y+ESL  I GM   ++ +A+ K  RK V
Sbjct: 349 NGVIFICDPITNSVKENFSIDNSKDESYVVVDYSESLFLIGGMLPVKKQDAQDKLARKKV 408


>ref|XP_009799847.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana
           sylvestris]
          Length = 411

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
 Frame = -3

Query: 875 SLDGWVFDDGEQIWRKDYTFGPIEVNMDRLLWCSKNGKILGERADGKLFVFDPKTGCVKF 696
           ++D WV DD E  W K      +    DR++ C +NG I+ E  +G LF+FDP T  VK 
Sbjct: 303 NVDIWVMDD-EDGWSKKCNVEML-FGFDRIIGCLRNGNIVAEDENGVLFLFDPVTNSVKA 360

Query: 695 -LFYAARPPQSFQIYRYAESLSYIEGMRQVNARRKRKR 585
            L        SF I  Y+ESL  IEGMR V  +  R +
Sbjct: 361 KLCIDNANSGSFMISNYSESLVLIEGMRPVKKQAARDK 398


>ref|XP_009627941.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana
           tomentosiformis]
          Length = 418

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
 Frame = -3

Query: 899 TKDNERVKSLDGWVFDDGEQIWRKDYTFGPIEVNMDRLLWCSKNGKILGERADGKLFVFD 720
           T D       D WV DD E  W K Y  GP+ + ++R + C +NG I+ +  +  +F+FD
Sbjct: 300 TFDERDESHFDVWVMDD-EDGWTKKYKVGPL-LGLERTMGCLRNGDIVAKNKEEVVFLFD 357

Query: 719 PKTGCVKF-LFYAARPPQSFQIYRYAESLSYIEGMRQVNARRKRKRKMVDDATR 561
           P T  VK  L   +    ++ I+ Y+ESL  I GM  V  +  R +      TR
Sbjct: 358 PVTCSVKANLSIDSSKNGAYMIFDYSESLMLIGGMLPVKKQNARDKLACKKLTR 411


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