BLASTX nr result
ID: Rehmannia28_contig00022337
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00022337
(658 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011089329.1| PREDICTED: general transcription factor IIH ... 162 2e-44
ref|XP_012827803.1| PREDICTED: general transcription factor IIH ... 161 4e-44
ref|XP_010319752.1| PREDICTED: general transcription factor IIH ... 157 5e-43
ref|XP_006363939.1| PREDICTED: general transcription factor IIH ... 157 6e-43
ref|XP_015074195.1| PREDICTED: general transcription factor IIH ... 157 7e-43
ref|XP_004237420.1| PREDICTED: general transcription factor IIH ... 157 7e-43
ref|XP_006363938.1| PREDICTED: general transcription factor IIH ... 157 1e-42
ref|XP_015159178.1| PREDICTED: general transcription factor IIH ... 157 2e-42
emb|CDP13112.1| unnamed protein product [Coffea canephora] 157 2e-42
ref|XP_009777720.1| PREDICTED: general transcription factor IIH ... 156 3e-42
ref|XP_009630848.1| PREDICTED: general transcription factor IIH ... 156 3e-42
ref|XP_006366483.1| PREDICTED: general transcription factor IIH ... 154 2e-41
ref|XP_010104122.1| General transcription factor IIH subunit 2 [... 151 3e-40
gb|AIU50497.1| GTF2H2, partial [Vitis vinifera] 150 4e-40
ref|XP_015579163.1| PREDICTED: general transcription factor IIH ... 149 9e-40
gb|EEF36037.1| btf, putative [Ricinus communis] 149 2e-39
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ... 148 5e-39
ref|XP_012064858.1| PREDICTED: general transcription factor IIH ... 147 7e-39
gb|AIU50489.1| GTF2H2, partial [Ricinus communis] 146 8e-39
emb|CBI16283.3| unnamed protein product [Vitis vinifera] 148 1e-38
>ref|XP_011089329.1| PREDICTED: general transcription factor IIH subunit 2 [Sesamum
indicum] gi|747083888|ref|XP_011089330.1| PREDICTED:
general transcription factor IIH subunit 2 [Sesamum
indicum]
Length = 422
Score = 162 bits (409), Expect = 2e-44
Identities = 79/85 (92%), Positives = 83/85 (97%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G DAWERTYADERSWESLQEDESGLLRPIDNK+LYHAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 29 GRDAWERTYADERSWESLQEDESGLLRPIDNKSLYHAQYRRRLRTTTAARIQKGLIRYLY 88
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
I+IDLSRAAGE DYKPSRMVVVARQ
Sbjct: 89 IMIDLSRAAGETDYKPSRMVVVARQ 113
>ref|XP_012827803.1| PREDICTED: general transcription factor IIH subunit 2 [Erythranthe
guttata] gi|848928415|ref|XP_012827804.1| PREDICTED:
general transcription factor IIH subunit 2 [Erythranthe
guttata] gi|604298891|gb|EYU18861.1| hypothetical
protein MIMGU_mgv1a007041mg [Erythranthe guttata]
Length = 422
Score = 161 bits (407), Expect = 4e-44
Identities = 79/85 (92%), Positives = 81/85 (95%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G +AWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTS+ RIQKGLIRYLY
Sbjct: 29 GREAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSTTTRIQKGLIRYLY 88
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
IVIDLSRAAGE DYKPSRMVVVARQ
Sbjct: 89 IVIDLSRAAGETDYKPSRMVVVARQ 113
>ref|XP_010319752.1| PREDICTED: general transcription factor IIH subunit 2 isoform X2
[Solanum lycopersicum]
Length = 392
Score = 157 bits (398), Expect = 5e-43
Identities = 77/85 (90%), Positives = 81/85 (95%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G +AWERTYADERSWESLQEDESGLLRPIDNKTL HAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 21 GREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYRRRLRTATAARIQKGLIRYLY 80
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
I+ID SRAA EMDYKPSRMVVVARQ
Sbjct: 81 IIIDFSRAAAEMDYKPSRMVVVARQ 105
>ref|XP_006363939.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
X3 [Solanum tuberosum]
Length = 369
Score = 157 bits (396), Expect = 6e-43
Identities = 77/85 (90%), Positives = 81/85 (95%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G +AWERTYADERSWESLQEDESGLLRPIDN TL HAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 21 GREAWERTYADERSWESLQEDESGLLRPIDNTTLSHAQYRRRLRTATAARIQKGLIRYLY 80
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
I+IDLSRAA EMDYKPSRMVVVARQ
Sbjct: 81 IIIDLSRAAAEMDYKPSRMVVVARQ 105
>ref|XP_015074195.1| PREDICTED: general transcription factor IIH subunit 2 [Solanum
pennellii]
Length = 414
Score = 157 bits (398), Expect = 7e-43
Identities = 77/85 (90%), Positives = 81/85 (95%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G +AWERTYADERSWESLQEDESGLLRPIDNKTL HAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 21 GREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYRRRLRTATAARIQKGLIRYLY 80
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
I+ID SRAA EMDYKPSRMVVVARQ
Sbjct: 81 IIIDFSRAAAEMDYKPSRMVVVARQ 105
>ref|XP_004237420.1| PREDICTED: general transcription factor IIH subunit 2 isoform X1
[Solanum lycopersicum]
Length = 414
Score = 157 bits (398), Expect = 7e-43
Identities = 77/85 (90%), Positives = 81/85 (95%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G +AWERTYADERSWESLQEDESGLLRPIDNKTL HAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 21 GREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYRRRLRTATAARIQKGLIRYLY 80
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
I+ID SRAA EMDYKPSRMVVVARQ
Sbjct: 81 IIIDFSRAAAEMDYKPSRMVVVARQ 105
>ref|XP_006363938.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
X2 [Solanum tuberosum]
Length = 414
Score = 157 bits (396), Expect = 1e-42
Identities = 77/85 (90%), Positives = 81/85 (95%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G +AWERTYADERSWESLQEDESGLLRPIDN TL HAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 21 GREAWERTYADERSWESLQEDESGLLRPIDNTTLSHAQYRRRLRTATAARIQKGLIRYLY 80
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
I+IDLSRAA EMDYKPSRMVVVARQ
Sbjct: 81 IIIDLSRAAAEMDYKPSRMVVVARQ 105
>ref|XP_015159178.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
X1 [Solanum tuberosum]
Length = 417
Score = 157 bits (396), Expect = 2e-42
Identities = 77/85 (90%), Positives = 81/85 (95%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G +AWERTYADERSWESLQEDESGLLRPIDN TL HAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 21 GREAWERTYADERSWESLQEDESGLLRPIDNTTLSHAQYRRRLRTATAARIQKGLIRYLY 80
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
I+IDLSRAA EMDYKPSRMVVVARQ
Sbjct: 81 IIIDLSRAAAEMDYKPSRMVVVARQ 105
>emb|CDP13112.1| unnamed protein product [Coffea canephora]
Length = 424
Score = 157 bits (396), Expect = 2e-42
Identities = 77/85 (90%), Positives = 80/85 (94%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G DAWER YADERSWESLQEDESGLLRPIDNK L+HAQYRRRLRT++ A IQKGLIRYLY
Sbjct: 31 GRDAWERAYADERSWESLQEDESGLLRPIDNKALHHAQYRRRLRTATTAGIQKGLIRYLY 90
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
IVIDLSRAAGEMDYKPSRMVVVARQ
Sbjct: 91 IVIDLSRAAGEMDYKPSRMVVVARQ 115
>ref|XP_009777720.1| PREDICTED: general transcription factor IIH subunit 2 [Nicotiana
sylvestris] gi|698582064|ref|XP_009777721.1| PREDICTED:
general transcription factor IIH subunit 2 [Nicotiana
sylvestris] gi|698582068|ref|XP_009777723.1| PREDICTED:
general transcription factor IIH subunit 2 [Nicotiana
sylvestris]
Length = 413
Score = 156 bits (394), Expect = 3e-42
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G +AWERTYADERSWESLQEDESGLLRPIDNKTL HAQYRRRLRT++AAR+QKGLIRYLY
Sbjct: 22 GREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYRRRLRTATAARVQKGLIRYLY 81
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
I+ID SRAA EMDYKPSRMVVVA+Q
Sbjct: 82 IIIDFSRAAAEMDYKPSRMVVVAKQ 106
>ref|XP_009630848.1| PREDICTED: general transcription factor IIH subunit 2 [Nicotiana
tomentosiformis]
Length = 415
Score = 156 bits (394), Expect = 3e-42
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G +AWERTYADERSWESLQEDESGLLRPIDNKTL HAQYRRRLRT++AAR+QKGLIRYLY
Sbjct: 22 GREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYRRRLRTATAARVQKGLIRYLY 81
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
I+ID SRAA EMDYKPSRMVVVA+Q
Sbjct: 82 IIIDFSRAAAEMDYKPSRMVVVAKQ 106
>ref|XP_006366483.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
tuberosum]
Length = 418
Score = 154 bits (388), Expect = 2e-41
Identities = 76/85 (89%), Positives = 80/85 (94%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
G +AWERTYADERSWESLQEDESGLLR IDNKTL HAQYRRRLRT++AARIQKGLIRYLY
Sbjct: 21 GREAWERTYADERSWESLQEDESGLLRLIDNKTLSHAQYRRRLRTATAARIQKGLIRYLY 80
Query: 579 IVIDLSRAAGEMDYKPSRMVVVARQ 653
I+ID SRAA EMDYKPSRMVVVARQ
Sbjct: 81 IIIDFSRAAAEMDYKPSRMVVVARQ 105
>ref|XP_010104122.1| General transcription factor IIH subunit 2 [Morus notabilis]
gi|587910692|gb|EXB98563.1| General transcription factor
IIH subunit 2 [Morus notabilis]
Length = 423
Score = 151 bits (381), Expect = 3e-40
Identities = 71/84 (84%), Positives = 80/84 (95%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
GL+AWERTYADERSWESLQEDESGLLRPIDNKT YHAQYRRRLR++SA RIQKGLIRYL+
Sbjct: 29 GLEAWERTYADERSWESLQEDESGLLRPIDNKTFYHAQYRRRLRSASAVRIQKGLIRYLF 88
Query: 579 IVIDLSRAAGEMDYKPSRMVVVAR 650
+VIDLS+AA EMD++PSRM VVA+
Sbjct: 89 LVIDLSKAAAEMDFRPSRMAVVAK 112
>gb|AIU50497.1| GTF2H2, partial [Vitis vinifera]
Length = 389
Score = 150 bits (378), Expect = 4e-40
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
GLDAWER YADERSWESLQEDESGLLRPIDNKT+YHAQYRRR+RT+ ARIQKGLIRYLY
Sbjct: 8 GLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRTT--ARIQKGLIRYLY 65
Query: 579 IVIDLSRAAGEMDYKPSRMVVVAR 650
IV+DLSRAA EMD+KPSRM VVA+
Sbjct: 66 IVVDLSRAASEMDFKPSRMAVVAK 89
>ref|XP_015579163.1| PREDICTED: general transcription factor IIH subunit 2 [Ricinus
communis]
Length = 413
Score = 149 bits (377), Expect = 9e-40
Identities = 72/85 (84%), Positives = 81/85 (95%), Gaps = 1/85 (1%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRT-SSAARIQKGLIRYL 575
GLDAWERTY DERSWE+LQEDESGLLRPIDNK +YHAQYRRR+R+ S++ARIQKGLIR+L
Sbjct: 27 GLDAWERTYTDERSWEALQEDESGLLRPIDNKAIYHAQYRRRIRSLSTSARIQKGLIRFL 86
Query: 576 YIVIDLSRAAGEMDYKPSRMVVVAR 650
YIV+DLSRAAGEMD KPSRMVV+AR
Sbjct: 87 YIVVDLSRAAGEMDIKPSRMVVIAR 111
>gb|EEF36037.1| btf, putative [Ricinus communis]
Length = 465
Score = 149 bits (377), Expect = 2e-39
Identities = 72/85 (84%), Positives = 81/85 (95%), Gaps = 1/85 (1%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRT-SSAARIQKGLIRYL 575
GLDAWERTY DERSWE+LQEDESGLLRPIDNK +YHAQYRRR+R+ S++ARIQKGLIR+L
Sbjct: 27 GLDAWERTYTDERSWEALQEDESGLLRPIDNKAIYHAQYRRRIRSLSTSARIQKGLIRFL 86
Query: 576 YIVIDLSRAAGEMDYKPSRMVVVAR 650
YIV+DLSRAAGEMD KPSRMVV+AR
Sbjct: 87 YIVVDLSRAAGEMDIKPSRMVVIAR 111
>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
vinifera] gi|731392554|ref|XP_010651135.1| PREDICTED:
general transcription factor IIH subunit 2 [Vitis
vinifera] gi|731392556|ref|XP_010651136.1| PREDICTED:
general transcription factor IIH subunit 2 [Vitis
vinifera]
Length = 433
Score = 148 bits (373), Expect = 5e-39
Identities = 72/88 (81%), Positives = 80/88 (90%), Gaps = 4/88 (4%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLR----TSSAARIQKGLI 566
GLDAWER YADERSWESLQEDESGLLRPIDNKT+YHAQYRRR+R +++ ARIQKGLI
Sbjct: 35 GLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLI 94
Query: 567 RYLYIVIDLSRAAGEMDYKPSRMVVVAR 650
RYLYIV+DLSRAA EMD+KPSRM VVA+
Sbjct: 95 RYLYIVVDLSRAASEMDFKPSRMAVVAK 122
>ref|XP_012064858.1| PREDICTED: general transcription factor IIH subunit 2 [Jatropha
curcas]
Length = 415
Score = 147 bits (371), Expect = 7e-39
Identities = 71/87 (81%), Positives = 80/87 (91%), Gaps = 4/87 (4%)
Frame = +3
Query: 402 LDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLR----TSSAARIQKGLIR 569
LDAWERTY DERSWE+LQEDESGLLRPIDNK +YHAQYRRRLR T++ ARIQKGLIR
Sbjct: 27 LDAWERTYTDERSWEALQEDESGLLRPIDNKAIYHAQYRRRLRALSATATTARIQKGLIR 86
Query: 570 YLYIVIDLSRAAGEMDYKPSRMVVVAR 650
+LYIV+DLSRAAGEMD+KPSRMVV+A+
Sbjct: 87 FLYIVVDLSRAAGEMDFKPSRMVVIAK 113
>gb|AIU50489.1| GTF2H2, partial [Ricinus communis]
Length = 386
Score = 146 bits (369), Expect = 8e-39
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLRTSSAARIQKGLIRYLY 578
GLDAWERTY DERSWE+LQEDESGLLRPIDNK +YHAQYRRR+R +ARIQKGLIR+LY
Sbjct: 8 GLDAWERTYTDERSWEALQEDESGLLRPIDNKAIYHAQYRRRIR---SARIQKGLIRFLY 64
Query: 579 IVIDLSRAAGEMDYKPSRMVVVAR 650
IV+DLSRAAGEMD KPSRMVV+AR
Sbjct: 65 IVVDLSRAAGEMDIKPSRMVVIAR 88
>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 148 bits (373), Expect = 1e-38
Identities = 72/88 (81%), Positives = 80/88 (90%), Gaps = 4/88 (4%)
Frame = +3
Query: 399 GLDAWERTYADERSWESLQEDESGLLRPIDNKTLYHAQYRRRLR----TSSAARIQKGLI 566
GLDAWER YADERSWESLQEDESGLLRPIDNKT+YHAQYRRR+R +++ ARIQKGLI
Sbjct: 96 GLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLI 155
Query: 567 RYLYIVIDLSRAAGEMDYKPSRMVVVAR 650
RYLYIV+DLSRAA EMD+KPSRM VVA+
Sbjct: 156 RYLYIVVDLSRAASEMDFKPSRMAVVAK 183