BLASTX nr result
ID: Rehmannia28_contig00022203
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00022203
(573 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011096672.1| PREDICTED: 30-kDa cleavage and polyadenylati... 102 5e-22
ref|XP_011085214.1| PREDICTED: 30-kDa cleavage and polyadenylati... 100 2e-21
ref|XP_008225626.1| PREDICTED: cleavage and polyadenylation spec... 96 1e-19
emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera] 93 1e-19
ref|XP_012436534.1| PREDICTED: 30-kDa cleavage and polyadenylati... 95 2e-19
gb|KJB47903.1| hypothetical protein B456_008G046800 [Gossypium r... 95 2e-19
ref|XP_002281594.1| PREDICTED: 30-kDa cleavage and polyadenylati... 93 8e-19
ref|XP_007214175.1| hypothetical protein PRUPE_ppa019072mg [Prun... 93 8e-19
ref|XP_015865601.1| PREDICTED: 30-kDa cleavage and polyadenylati... 92 3e-18
ref|XP_015882698.1| PREDICTED: 30-kDa cleavage and polyadenylati... 92 3e-18
ref|XP_010092677.1| Cleavage and polyadenylation specificity fac... 92 3e-18
ref|XP_009789024.1| PREDICTED: cleavage and polyadenylation spec... 91 5e-18
ref|XP_007041140.1| Cleavage and polyadenylation specificity fac... 91 5e-18
ref|XP_009628296.1| PREDICTED: cleavage and polyadenylation spec... 88 4e-17
ref|XP_012075636.1| PREDICTED: 30-kDa cleavage and polyadenylati... 87 1e-16
ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citr... 86 3e-16
ref|XP_015382577.1| PREDICTED: 30-kDa cleavage and polyadenylati... 86 3e-16
ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citr... 86 3e-16
ref|XP_002523201.1| PREDICTED: 30-kDa cleavage and polyadenylati... 86 3e-16
ref|XP_009362243.1| PREDICTED: cleavage and polyadenylation spec... 84 2e-15
>ref|XP_011096672.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Sesamum indicum]
Length = 679
Score = 102 bits (254), Expect = 5e-22
Identities = 56/82 (68%), Positives = 60/82 (73%), Gaps = 7/82 (8%)
Frame = -1
Query: 225 NRPKRDQKAPNGDR-------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRN 67
NR KRDQKAP DR KD EM GSAG DE QYQQR K Q +D YSAG+ +RN
Sbjct: 593 NRAKRDQKAPTSDRNEGSAHAKDQEMAGSAG---DEGQYQQRAKVQ--QDHYSAGSSHRN 647
Query: 66 DESESEDEAPRRSRHGEGKKKR 1
DES+SEDEAPRRSRHGEGKKKR
Sbjct: 648 DESDSEDEAPRRSRHGEGKKKR 669
>ref|XP_011085214.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Sesamum indicum]
Length = 688
Score = 100 bits (249), Expect = 2e-21
Identities = 55/82 (67%), Positives = 59/82 (71%), Gaps = 7/82 (8%)
Frame = -1
Query: 225 NRPKRDQKAPNGDRKDG-------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRN 67
NR KRD KAP D+ DG E+ GS+GG GDE + R KAQ QED YSAGN RN
Sbjct: 597 NRAKRDLKAPFNDKNDGPDQGKGQEISGSSGGHGDEGRNLPRLKAQ-QEDHYSAGNSYRN 655
Query: 66 DESESEDEAPRRSRHGEGKKKR 1
DESESEDEAPRRSRHGEGKKKR
Sbjct: 656 DESESEDEAPRRSRHGEGKKKR 677
>ref|XP_008225626.1| PREDICTED: cleavage and polyadenylation specificity factor CPSF30
[Prunus mume]
Length = 715
Score = 95.5 bits (236), Expect = 1e-19
Identities = 50/82 (60%), Positives = 58/82 (70%), Gaps = 11/82 (13%)
Frame = -1
Query: 216 KRDQKAPNGDR-----------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 70
KRD + P+ DR K E+ GSAGGP DE++YQQ KA R ED+Y AGN +R
Sbjct: 623 KRDPRGPSNDRNERYSAGSGQGKGQEIPGSAGGPDDEARYQQASKAYR-EDQYGAGNNSR 681
Query: 69 NDESESEDEAPRRSRHGEGKKK 4
ND+SESEDEAPRRSRHGEGKKK
Sbjct: 682 NDDSESEDEAPRRSRHGEGKKK 703
>emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera]
Length = 299
Score = 93.2 bits (230), Expect = 1e-19
Identities = 50/82 (60%), Positives = 56/82 (68%), Gaps = 7/82 (8%)
Frame = -1
Query: 225 NRPKRDQKAPNGDRKDGEMGGS-------AGGPGDESQYQQRGKAQRQEDRYSAGNGNRN 67
NR KRDQ+ P DR D GGS GP DE+QY Q K+Q Q+D++ GN RN
Sbjct: 219 NRTKRDQRTPVNDRNDRYSGGSDQGRGQDMAGPDDETQYLQGLKSQ-QDDQFGGGNSFRN 277
Query: 66 DESESEDEAPRRSRHGEGKKKR 1
DESESEDEAPRRSRHGEGKKKR
Sbjct: 278 DESESEDEAPRRSRHGEGKKKR 299
>ref|XP_012436534.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Gossypium raimondii] gi|763780831|gb|KJB47902.1|
hypothetical protein B456_008G046800 [Gossypium
raimondii]
Length = 700
Score = 94.7 bits (234), Expect = 2e-19
Identities = 47/80 (58%), Positives = 54/80 (67%), Gaps = 8/80 (10%)
Frame = -1
Query: 216 KRDQKAPNGDRKDG--------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDE 61
KRDQ+ P DR EMGG GG D +QYQQ G+ ED+++AGN RND+
Sbjct: 608 KRDQRTPTNDRSSAGSEQGRGQEMGGPGGGLEDGTQYQQEGQKAHHEDQFAAGNSFRNDD 667
Query: 60 SESEDEAPRRSRHGEGKKKR 1
SESEDEAPRRSRHGEGKKKR
Sbjct: 668 SESEDEAPRRSRHGEGKKKR 687
>gb|KJB47903.1| hypothetical protein B456_008G046800 [Gossypium raimondii]
Length = 701
Score = 94.7 bits (234), Expect = 2e-19
Identities = 47/80 (58%), Positives = 54/80 (67%), Gaps = 8/80 (10%)
Frame = -1
Query: 216 KRDQKAPNGDRKDG--------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDE 61
KRDQ+ P DR EMGG GG D +QYQQ G+ ED+++AGN RND+
Sbjct: 609 KRDQRTPTNDRSSAGSEQGRGQEMGGPGGGLEDGTQYQQEGQKAHHEDQFAAGNSFRNDD 668
Query: 60 SESEDEAPRRSRHGEGKKKR 1
SESEDEAPRRSRHGEGKKKR
Sbjct: 669 SESEDEAPRRSRHGEGKKKR 688
>ref|XP_002281594.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Vitis vinifera]
Length = 673
Score = 93.2 bits (230), Expect = 8e-19
Identities = 50/82 (60%), Positives = 56/82 (68%), Gaps = 7/82 (8%)
Frame = -1
Query: 225 NRPKRDQKAPNGDRKDGEMGGS-------AGGPGDESQYQQRGKAQRQEDRYSAGNGNRN 67
NR KRDQ+ P DR D GGS GP DE+QY Q K+Q Q+D++ GN RN
Sbjct: 593 NRTKRDQRTPVNDRNDRYSGGSDQGRGQDMAGPDDETQYLQGLKSQ-QDDQFGGGNSFRN 651
Query: 66 DESESEDEAPRRSRHGEGKKKR 1
DESESEDEAPRRSRHGEGKKKR
Sbjct: 652 DESESEDEAPRRSRHGEGKKKR 673
>ref|XP_007214175.1| hypothetical protein PRUPE_ppa019072mg [Prunus persica]
gi|462410040|gb|EMJ15374.1| hypothetical protein
PRUPE_ppa019072mg [Prunus persica]
Length = 695
Score = 93.2 bits (230), Expect = 8e-19
Identities = 49/82 (59%), Positives = 57/82 (69%), Gaps = 11/82 (13%)
Frame = -1
Query: 216 KRDQKAPNGDR-----------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 70
KRD + P+ DR K E+ G AGGP DE++YQQ KA R ED+Y AGN +R
Sbjct: 603 KRDPRGPSNDRNERYSAGSGQGKGQEIPGLAGGPDDEARYQQASKAYR-EDQYGAGNNSR 661
Query: 69 NDESESEDEAPRRSRHGEGKKK 4
ND+SESEDEAPRRSRHGEGKKK
Sbjct: 662 NDDSESEDEAPRRSRHGEGKKK 683
>ref|XP_015865601.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Ziziphus jujuba]
Length = 696
Score = 91.7 bits (226), Expect = 3e-18
Identities = 50/81 (61%), Positives = 54/81 (66%), Gaps = 9/81 (11%)
Frame = -1
Query: 216 KRDQKAPNGDRKDGEMGGS---------AGGPGDESQYQQRGKAQRQEDRYSAGNGNRND 64
KRDQ+ P DR + GS AGGP DE+ YQQ G QED+Y AGN RND
Sbjct: 604 KRDQRGPANDRNERFSVGSDQLKGQEGQAGGPDDEAHYQQ-GLKPHQEDQYGAGNSFRND 662
Query: 63 ESESEDEAPRRSRHGEGKKKR 1
ESESEDEAPRRSRHGEGKKKR
Sbjct: 663 ESESEDEAPRRSRHGEGKKKR 683
>ref|XP_015882698.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Ziziphus jujuba]
Length = 702
Score = 91.7 bits (226), Expect = 3e-18
Identities = 50/81 (61%), Positives = 54/81 (66%), Gaps = 9/81 (11%)
Frame = -1
Query: 216 KRDQKAPNGDRKDGEMGGS---------AGGPGDESQYQQRGKAQRQEDRYSAGNGNRND 64
KRDQ+ P DR + GS AGGP DE+ YQQ G QED+Y AGN RND
Sbjct: 610 KRDQRGPANDRNERFSVGSDQLKGQEGQAGGPDDEAHYQQ-GLKPHQEDQYGAGNSFRND 668
Query: 63 ESESEDEAPRRSRHGEGKKKR 1
ESESEDEAPRRSRHGEGKKKR
Sbjct: 669 ESESEDEAPRRSRHGEGKKKR 689
>ref|XP_010092677.1| Cleavage and polyadenylation specificity factor CPSF30 [Morus
notabilis] gi|587862159|gb|EXB51974.1| Cleavage and
polyadenylation specificity factor CPSF30 [Morus
notabilis]
Length = 710
Score = 91.7 bits (226), Expect = 3e-18
Identities = 49/84 (58%), Positives = 56/84 (66%), Gaps = 11/84 (13%)
Frame = -1
Query: 219 PKRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGN 73
P+RDQ+ DR + EM G AGGP D++ YQ KA RQED+Y AGN
Sbjct: 615 PRRDQRGLANDRNERYGAGSDQVRGQEMSGPAGGPEDDAHYQLGAKA-RQEDQYGAGNSF 673
Query: 72 RNDESESEDEAPRRSRHGEGKKKR 1
RNDESESEDEAPRRSRHG+GKKKR
Sbjct: 674 RNDESESEDEAPRRSRHGDGKKKR 697
>ref|XP_009789024.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Nicotiana sylvestris]
gi|698484435|ref|XP_009789025.1| PREDICTED: cleavage and
polyadenylation specificity factor CPSF30-like
[Nicotiana sylvestris]
Length = 690
Score = 90.9 bits (224), Expect = 5e-18
Identities = 50/85 (58%), Positives = 58/85 (68%), Gaps = 11/85 (12%)
Frame = -1
Query: 222 RPKRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNG 76
RPKR+Q+AP DR D EM GS GGP D Y QRGK + Q+ ++ AGNG
Sbjct: 595 RPKREQRAPVHDRNDRFSSGSDQGKGQEMAGSVGGP-DGVNYPQRGKTE-QDAQFGAGNG 652
Query: 75 NRNDESESEDEAPRRSRHGEGKKKR 1
+NDESESEDEAPRRSRHG+GKKKR
Sbjct: 653 FKNDESESEDEAPRRSRHGDGKKKR 677
>ref|XP_007041140.1| Cleavage and polyadenylation specificity factor 30 [Theobroma
cacao] gi|508705075|gb|EOX96971.1| Cleavage and
polyadenylation specificity factor 30 [Theobroma cacao]
Length = 698
Score = 90.9 bits (224), Expect = 5e-18
Identities = 46/80 (57%), Positives = 54/80 (67%), Gaps = 8/80 (10%)
Frame = -1
Query: 216 KRDQKAPNGDR--------KDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDE 61
KRDQ+ P DR + EM G G DE+QYQQ G+ ED+++AGN RNDE
Sbjct: 606 KRDQRTPTNDRYGAGSEQGRGQEMAGPGGRLDDETQYQQEGQKAHHEDQFAAGNSFRNDE 665
Query: 60 SESEDEAPRRSRHGEGKKKR 1
SESEDEAPRRSR+GEGKKKR
Sbjct: 666 SESEDEAPRRSRYGEGKKKR 685
>ref|XP_009628296.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Nicotiana tomentosiformis]
Length = 691
Score = 88.2 bits (217), Expect = 4e-17
Identities = 49/85 (57%), Positives = 57/85 (67%), Gaps = 11/85 (12%)
Frame = -1
Query: 222 RPKRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNG 76
RPKR+Q+AP DR D EM GS GGP D Y QRGK + Q+ ++ AGN
Sbjct: 596 RPKREQRAPVHDRNDRFSSGSDQGKGQEMAGSVGGP-DGVNYPQRGKPE-QDAQFGAGNS 653
Query: 75 NRNDESESEDEAPRRSRHGEGKKKR 1
+NDESESEDEAPRRSRHG+GKKKR
Sbjct: 654 FKNDESESEDEAPRRSRHGDGKKKR 678
>ref|XP_012075636.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 isoform X1 [Jatropha curcas]
gi|643726134|gb|KDP34942.1| hypothetical protein
JCGZ_09230 [Jatropha curcas]
Length = 722
Score = 87.0 bits (214), Expect = 1e-16
Identities = 45/78 (57%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Frame = -1
Query: 216 KRDQKAPNGDRKD-----GEMG-GSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDESE 55
KRDQ+ DR D E G G+AGG D+ Q+Q G ED++ AGN RND+SE
Sbjct: 632 KRDQRTTTNDRNDRYSAGSEQGRGTAGGQEDDGQFQHEGIKASHEDQFGAGNSFRNDDSE 691
Query: 54 SEDEAPRRSRHGEGKKKR 1
SEDEAPRRSRHGEGKKKR
Sbjct: 692 SEDEAPRRSRHGEGKKKR 709
>ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
gi|557551536|gb|ESR62165.1| hypothetical protein
CICLE_v10014454mg [Citrus clementina]
Length = 672
Score = 85.9 bits (211), Expect = 3e-16
Identities = 48/83 (57%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Frame = -1
Query: 216 KRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 70
KRD + DR D EMGG GP DE QYQQ G QED+Y + N R
Sbjct: 578 KRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRNF-R 636
Query: 69 NDESESEDEAPRRSRHGEGKKKR 1
NDESESEDEAPRRSRHGEGKKKR
Sbjct: 637 NDESESEDEAPRRSRHGEGKKKR 659
>ref|XP_015382577.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Citrus sinensis] gi|641856531|gb|KDO75297.1|
hypothetical protein CISIN_1g005338mg [Citrus sinensis]
Length = 701
Score = 85.9 bits (211), Expect = 3e-16
Identities = 48/83 (57%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Frame = -1
Query: 216 KRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 70
KRD + DR D EMGG GP DE QYQQ G QED+Y + N R
Sbjct: 607 KRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRNF-R 665
Query: 69 NDESESEDEAPRRSRHGEGKKKR 1
NDESESEDEAPRRSRHGEGKKKR
Sbjct: 666 NDESESEDEAPRRSRHGEGKKKR 688
>ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
gi|557551535|gb|ESR62164.1| hypothetical protein
CICLE_v10014454mg [Citrus clementina]
Length = 701
Score = 85.9 bits (211), Expect = 3e-16
Identities = 48/83 (57%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Frame = -1
Query: 216 KRDQKAPNGDRKDG-----------EMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNR 70
KRD + DR D EMGG GP DE QYQQ G QED+Y + N R
Sbjct: 607 KRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRNF-R 665
Query: 69 NDESESEDEAPRRSRHGEGKKKR 1
NDESESEDEAPRRSRHGEGKKKR
Sbjct: 666 NDESESEDEAPRRSRHGEGKKKR 688
>ref|XP_002523201.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Ricinus communis] gi|223537608|gb|EEF39232.1|
conserved hypothetical protein [Ricinus communis]
Length = 702
Score = 85.9 bits (211), Expect = 3e-16
Identities = 45/75 (60%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Frame = -1
Query: 216 KRDQKAPNGDRKD--GEMG-GSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDESESED 46
KRDQ+ DR + G +AG P DE++YQQ G ED++ AGN RNDESESED
Sbjct: 615 KRDQRMTANDRYSTGSDQGRNTAGEPDDEARYQQEGLKASHEDQFGAGNSFRNDESESED 674
Query: 45 EAPRRSRHGEGKKKR 1
EAPRRSRHGEGKKKR
Sbjct: 675 EAPRRSRHGEGKKKR 689
>ref|XP_009362243.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Pyrus x bretschneideri]
Length = 671
Score = 83.6 bits (205), Expect = 2e-15
Identities = 42/72 (58%), Positives = 49/72 (68%)
Frame = -1
Query: 216 KRDQKAPNGDRKDGEMGGSAGGPGDESQYQQRGKAQRQEDRYSAGNGNRNDESESEDEAP 37
KRD + +GDR+ +M GSAGGP DE+ Y AGN +RND+SESEDEAP
Sbjct: 602 KRDPRGASGDRRGQDMTGSAGGPDDEAHY-------------GAGNNSRNDDSESEDEAP 648
Query: 36 RRSRHGEGKKKR 1
RRSRHGEGKKKR
Sbjct: 649 RRSRHGEGKKKR 660