BLASTX nr result

ID: Rehmannia28_contig00021859 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00021859
         (367 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011091368.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   139   7e-36
ref|XP_012829062.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   133   7e-34
ref|XP_015887722.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   125   5e-31
ref|XP_010103466.1| DEAD-box ATP-dependent RNA helicase 13 [Moru...   125   5e-31
ref|XP_009784475.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   124   1e-30
ref|XP_004247775.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   123   2e-30
gb|EEF44337.1| dead box ATP-dependent RNA helicase, putative [Ri...   121   3e-30
ref|XP_006340873.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   122   3e-30
ref|XP_002518203.2| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   121   8e-30
ref|XP_015088155.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   121   8e-30
ref|XP_012077644.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   120   2e-29
ref|XP_009613685.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   120   2e-29
gb|EPS61372.1| hypothetical protein M569_13422, partial [Genlise...   119   3e-29
ref|XP_010650181.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   119   7e-29
ref|XP_010650180.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   119   7e-29
ref|XP_009613693.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   117   2e-28
ref|XP_002314517.1| DEAD/DEAH box helicase family protein [Popul...   117   3e-28
ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   115   9e-28
ref|XP_011041475.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   115   1e-27
emb|CAN65340.1| hypothetical protein VITISV_038405 [Vitis vinifera]   114   2e-27

>ref|XP_011091368.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Sesamum indicum]
          Length = 815

 Score =  139 bits (349), Expect = 7e-36
 Identities = 66/88 (75%), Positives = 74/88 (84%)
 Frame = +3

Query: 36  DHQQNNETIKAEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNF 215
           D ++NNE  K EE A   A  DG DN + ++DSVDEEEYYAWNELRLHP+IMKSIYRL F
Sbjct: 145 DQRKNNEANKVEENAA-TADGDGNDNDNVDEDSVDEEEYYAWNELRLHPIIMKSIYRLKF 203

Query: 216 KEPTPIQKACIPAAAHQGKDVIGAAETG 299
           KEPTPIQ+AC+PAAAHQGKDVIGAAETG
Sbjct: 204 KEPTPIQRACVPAAAHQGKDVIGAAETG 231


>ref|XP_012829062.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Erythranthe
           guttata] gi|604345171|gb|EYU43782.1| hypothetical
           protein MIMGU_mgv1a001380mg [Erythranthe guttata]
          Length = 829

 Score =  133 bits (334), Expect = 7e-34
 Identities = 68/97 (70%), Positives = 75/97 (77%), Gaps = 11/97 (11%)
 Frame = +3

Query: 42  QQNNETIKAEETAEPAA-----------ASDGRDNGDAEDDSVDEEEYYAWNELRLHPMI 188
           ++N+ET K EE AE AA           A D  +N + E++SVDEEEYYAWNELRLHP I
Sbjct: 153 KKNDETNKTEENAESAAVCSPQHESLIPAGDEGENTNVEEESVDEEEYYAWNELRLHPTI 212

Query: 189 MKSIYRLNFKEPTPIQKACIPAAAHQGKDVIGAAETG 299
           MKSIYRL FKEPTPIQKACIPAAAHQGKDVIGAAETG
Sbjct: 213 MKSIYRLKFKEPTPIQKACIPAAAHQGKDVIGAAETG 249


>ref|XP_015887722.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Ziziphus jujuba]
          Length = 843

 Score =  125 bits (313), Expect = 5e-31
 Identities = 58/79 (73%), Positives = 69/79 (87%)
 Frame = +3

Query: 63  KAEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPIQKA 242
           ++++  EP A S+ +D  D E+++VDE EYYAWNELRLHP+IMKSIYRL FKEPTPIQKA
Sbjct: 180 ESQKKEEPPAVSNSKD--DVEEEAVDETEYYAWNELRLHPLIMKSIYRLGFKEPTPIQKA 237

Query: 243 CIPAAAHQGKDVIGAAETG 299
           C+PAAAHQGKDVIGAAETG
Sbjct: 238 CVPAAAHQGKDVIGAAETG 256


>ref|XP_010103466.1| DEAD-box ATP-dependent RNA helicase 13 [Morus notabilis]
           gi|587907983|gb|EXB95959.1| DEAD-box ATP-dependent RNA
           helicase 13 [Morus notabilis]
          Length = 848

 Score =  125 bits (313), Expect = 5e-31
 Identities = 62/93 (66%), Positives = 70/93 (75%), Gaps = 7/93 (7%)
 Frame = +3

Query: 42  QQNNETIKAE-------ETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSI 200
           +Q N+  K E       E  E  A S+G D  D E+  +DE+EYYAWNELRLHP+IMKSI
Sbjct: 163 EQENKKTKGEKKVKETRENEESTAVSNGND--DVEEQPIDEDEYYAWNELRLHPLIMKSI 220

Query: 201 YRLNFKEPTPIQKACIPAAAHQGKDVIGAAETG 299
           YRL FKEPTPIQKACIPAAAHQGKDV+GAAETG
Sbjct: 221 YRLGFKEPTPIQKACIPAAAHQGKDVVGAAETG 253


>ref|XP_009784475.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X1
           [Nicotiana sylvestris]
          Length = 802

 Score =  124 bits (310), Expect = 1e-30
 Identities = 60/79 (75%), Positives = 65/79 (82%)
 Frame = +3

Query: 63  KAEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPIQKA 242
           KAE   E AA +D  +N D E DSVDE EYYAWNELRLHP++MKSIY L FKEPTPIQK 
Sbjct: 143 KAEGNEESAAVTD--ENDDREQDSVDETEYYAWNELRLHPLLMKSIYALKFKEPTPIQKM 200

Query: 243 CIPAAAHQGKDVIGAAETG 299
           CIPAAAHQGKDV+GAAETG
Sbjct: 201 CIPAAAHQGKDVVGAAETG 219


>ref|XP_004247775.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Solanum
           lycopersicum]
          Length = 799

 Score =  123 bits (308), Expect = 2e-30
 Identities = 58/79 (73%), Positives = 65/79 (82%)
 Frame = +3

Query: 63  KAEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPIQKA 242
           +AE   EP A +DG D  D E DSVDE EYYAWNELRLHP++MKSIY L FKEPTPIQ+A
Sbjct: 141 EAEGNEEPPAVTDGND--DQEQDSVDETEYYAWNELRLHPLLMKSIYALKFKEPTPIQQA 198

Query: 243 CIPAAAHQGKDVIGAAETG 299
           CIPA +HQGKDV+GAAETG
Sbjct: 199 CIPAGSHQGKDVVGAAETG 217


>gb|EEF44337.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
          Length = 496

 Score =  121 bits (304), Expect = 3e-30
 Identities = 61/82 (74%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
 Frame = +3

Query: 63  KAEETA---EPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPI 233
           KA+ET    +PAA S+G D+ D E  SVDE E++AWNELRLHP++MKSIYRL FKEPTPI
Sbjct: 128 KAKETQKNEQPAAVSNGEDDTDGE--SVDEAEFHAWNELRLHPLLMKSIYRLGFKEPTPI 185

Query: 234 QKACIPAAAHQGKDVIGAAETG 299
           QKACIP AAHQGKDVIGAAETG
Sbjct: 186 QKACIPPAAHQGKDVIGAAETG 207


>ref|XP_006340873.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Solanum
           tuberosum]
          Length = 797

 Score =  122 bits (307), Expect = 3e-30
 Identities = 59/79 (74%), Positives = 64/79 (81%)
 Frame = +3

Query: 63  KAEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPIQKA 242
           +AE   E  A +DG D  D E DSVDE EYYAWNELRLHP++MKSIY L FKEPTPIQKA
Sbjct: 140 EAEGNEESPAVTDGND--DQEQDSVDETEYYAWNELRLHPLLMKSIYALKFKEPTPIQKA 197

Query: 243 CIPAAAHQGKDVIGAAETG 299
           CIPA AHQGKDV+GAAETG
Sbjct: 198 CIPAGAHQGKDVVGAAETG 216


>ref|XP_002518203.2| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           13 [Ricinus communis]
          Length = 794

 Score =  121 bits (304), Expect = 8e-30
 Identities = 61/82 (74%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
 Frame = +3

Query: 63  KAEETA---EPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPI 233
           KA+ET    +PAA S+G D+ D E  SVDE E++AWNELRLHP++MKSIYRL FKEPTPI
Sbjct: 128 KAKETQKNEQPAAVSNGEDDTDGE--SVDEAEFHAWNELRLHPLLMKSIYRLGFKEPTPI 185

Query: 234 QKACIPAAAHQGKDVIGAAETG 299
           QKACIP AAHQGKDVIGAAETG
Sbjct: 186 QKACIPPAAHQGKDVIGAAETG 207


>ref|XP_015088155.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Solanum
           pennellii]
          Length = 795

 Score =  121 bits (304), Expect = 8e-30
 Identities = 58/79 (73%), Positives = 64/79 (81%)
 Frame = +3

Query: 63  KAEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPIQKA 242
           +AE   E  A +DG D  D E DSVDE EYYAWNELRLHP++MKSIY L FKEPTPIQKA
Sbjct: 137 EAEGNEESPAVTDGND--DQEQDSVDETEYYAWNELRLHPLLMKSIYALKFKEPTPIQKA 194

Query: 243 CIPAAAHQGKDVIGAAETG 299
           CIPA +HQGKDV+GAAETG
Sbjct: 195 CIPAGSHQGKDVVGAAETG 213


>ref|XP_012077644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Jatropha curcas]
           gi|643724050|gb|KDP33350.1| hypothetical protein
           JCGZ_12899 [Jatropha curcas]
          Length = 801

 Score =  120 bits (302), Expect = 2e-29
 Identities = 58/86 (67%), Positives = 68/86 (79%)
 Frame = +3

Query: 42  QQNNETIKAEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKE 221
           +Q  +  + E+  EP A S+G D  D E  S DE E++AWNELRLHP++M+SIYRL FKE
Sbjct: 133 EQKKKLREIEKNEEPEAVSNGTDKVDGE--SADESEFHAWNELRLHPLLMRSIYRLGFKE 190

Query: 222 PTPIQKACIPAAAHQGKDVIGAAETG 299
           PTPIQKACIPAAAHQGKDVIGAAETG
Sbjct: 191 PTPIQKACIPAAAHQGKDVIGAAETG 216


>ref|XP_009613685.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X1
           [Nicotiana tomentosiformis]
          Length = 802

 Score =  120 bits (302), Expect = 2e-29
 Identities = 58/78 (74%), Positives = 64/78 (82%)
 Frame = +3

Query: 66  AEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPIQKAC 245
           AE   E +A +D  +N D E DSVDE EYYAWNELRLHP++MKSIY L FKEPTPIQK C
Sbjct: 144 AEGNEESSAVTD--ENDDREQDSVDETEYYAWNELRLHPLLMKSIYALKFKEPTPIQKMC 201

Query: 246 IPAAAHQGKDVIGAAETG 299
           IPAAAHQGKDV+GAAETG
Sbjct: 202 IPAAAHQGKDVVGAAETG 219


>gb|EPS61372.1| hypothetical protein M569_13422, partial [Genlisea aurea]
          Length = 633

 Score =  119 bits (299), Expect = 3e-29
 Identities = 56/68 (82%), Positives = 61/68 (89%)
 Frame = +3

Query: 96  SDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPIQKACIPAAAHQGKD 275
           +DG  +GDAE  S DEE+YYAWNELRLHP+IMKSI+RLNFK PT IQKACIPAAAHQGKD
Sbjct: 3   NDGISDGDAEKGSFDEEQYYAWNELRLHPLIMKSIFRLNFKGPTAIQKACIPAAAHQGKD 62

Query: 276 VIGAAETG 299
           VIGAAETG
Sbjct: 63  VIGAAETG 70


>ref|XP_010650181.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X3 [Vitis
           vinifera]
          Length = 727

 Score =  119 bits (297), Expect = 7e-29
 Identities = 54/86 (62%), Positives = 66/86 (76%)
 Frame = +3

Query: 42  QQNNETIKAEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKE 221
           ++  +  K  +T E +A     D  D E DSVDE E+Y WNELRLHP++MKSI+RL FK+
Sbjct: 119 KKKKKVTKKNQTNEESATVVSNDKDDVEGDSVDEAEFYEWNELRLHPLLMKSIHRLGFKQ 178

Query: 222 PTPIQKACIPAAAHQGKDVIGAAETG 299
           PTPIQKACIPAAAHQGKDV+GA+ETG
Sbjct: 179 PTPIQKACIPAAAHQGKDVVGASETG 204


>ref|XP_010650180.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X1 [Vitis
           vinifera]
          Length = 789

 Score =  119 bits (297), Expect = 7e-29
 Identities = 54/86 (62%), Positives = 66/86 (76%)
 Frame = +3

Query: 42  QQNNETIKAEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKE 221
           ++  +  K  +T E +A     D  D E DSVDE E+Y WNELRLHP++MKSI+RL FK+
Sbjct: 119 KKKKKVTKKNQTNEESATVVSNDKDDVEGDSVDEAEFYEWNELRLHPLLMKSIHRLGFKQ 178

Query: 222 PTPIQKACIPAAAHQGKDVIGAAETG 299
           PTPIQKACIPAAAHQGKDV+GA+ETG
Sbjct: 179 PTPIQKACIPAAAHQGKDVVGASETG 204


>ref|XP_009613693.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X2
           [Nicotiana tomentosiformis]
          Length = 659

 Score =  117 bits (293), Expect = 2e-28
 Identities = 53/64 (82%), Positives = 57/64 (89%)
 Frame = +3

Query: 108 DNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPIQKACIPAAAHQGKDVIGA 287
           +N D E DSVDE EYYAWNELRLHP++MKSIY L FKEPTPIQK CIPAAAHQGKDV+GA
Sbjct: 13  ENDDREQDSVDETEYYAWNELRLHPLLMKSIYALKFKEPTPIQKMCIPAAAHQGKDVVGA 72

Query: 288 AETG 299
           AETG
Sbjct: 73  AETG 76


>ref|XP_002314517.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
           gi|222863557|gb|EEF00688.1| DEAD/DEAH box helicase
           family protein [Populus trichocarpa]
          Length = 847

 Score =  117 bits (293), Expect = 3e-28
 Identities = 57/82 (69%), Positives = 68/82 (82%), Gaps = 3/82 (3%)
 Frame = +3

Query: 63  KAEETA---EPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPI 233
           KA+E++   E  + S+ +D  D E +SVDE E+Y WNELRLHP++MKSIYRL FKEPTPI
Sbjct: 131 KAKESSRVDETTSVSNNKD--DVEGESVDETEFYGWNELRLHPLLMKSIYRLGFKEPTPI 188

Query: 234 QKACIPAAAHQGKDVIGAAETG 299
           QKACIPAAAHQGKDV+GAAETG
Sbjct: 189 QKACIPAAAHQGKDVVGAAETG 210


>ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X2 [Vitis
           vinifera] gi|296083755|emb|CBI23744.3| unnamed protein
           product [Vitis vinifera]
          Length = 788

 Score =  115 bits (289), Expect = 9e-28
 Identities = 55/81 (67%), Positives = 65/81 (80%)
 Frame = +3

Query: 57  TIKAEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPIQ 236
           T K +   E A  S+ +D  D E DSVDE E+Y WNELRLHP++MKSI+RL FK+PTPIQ
Sbjct: 125 TKKNQTNEESATVSNDKD--DVEGDSVDEAEFYEWNELRLHPLLMKSIHRLGFKQPTPIQ 182

Query: 237 KACIPAAAHQGKDVIGAAETG 299
           KACIPAAAHQGKDV+GA+ETG
Sbjct: 183 KACIPAAAHQGKDVVGASETG 203


>ref|XP_011041475.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X2
           [Populus euphratica]
          Length = 799

 Score =  115 bits (288), Expect = 1e-27
 Identities = 56/82 (68%), Positives = 68/82 (82%), Gaps = 3/82 (3%)
 Frame = +3

Query: 63  KAEETA---EPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKEPTPI 233
           KA+E++   E  + S+ +D  D E +SVDE E+Y WNELRLHP++MKSI+RL FKEPTPI
Sbjct: 133 KAKESSKVDETTSVSNNKD--DVEGESVDETEFYGWNELRLHPVLMKSIFRLGFKEPTPI 190

Query: 234 QKACIPAAAHQGKDVIGAAETG 299
           QKACIPAAAHQGKDV+GAAETG
Sbjct: 191 QKACIPAAAHQGKDVVGAAETG 212


>emb|CAN65340.1| hypothetical protein VITISV_038405 [Vitis vinifera]
          Length = 458

 Score =  114 bits (284), Expect = 2e-27
 Identities = 53/86 (61%), Positives = 67/86 (77%)
 Frame = +3

Query: 42  QQNNETIKAEETAEPAAASDGRDNGDAEDDSVDEEEYYAWNELRLHPMIMKSIYRLNFKE 221
           ++  +  K  +T E +A    +D  D E DSVDE E+Y WNELR+HP++MKSI+RL FK+
Sbjct: 133 KKKKKVTKKNQTNEESATVVDKD--DVEGDSVDEAEFYEWNELRIHPLLMKSIHRLGFKQ 190

Query: 222 PTPIQKACIPAAAHQGKDVIGAAETG 299
           PTPIQKACIPAAAHQGKDV+GA+ETG
Sbjct: 191 PTPIQKACIPAAAHQGKDVVGASETG 216


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