BLASTX nr result

ID: Rehmannia28_contig00019770 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00019770
         (388 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080342.1| PREDICTED: epithelial splicing regulatory pr...    63   4e-09
ref|XP_002513501.1| PREDICTED: heterogeneous nuclear ribonucleop...    62   4e-09
ref|XP_009790464.1| PREDICTED: heterogeneous nuclear ribonucleop...    61   1e-08
ref|XP_009619028.1| PREDICTED: heterogeneous nuclear ribonucleop...    61   1e-08
ref|XP_012090009.1| PREDICTED: heterogeneous nuclear ribonucleop...    59   4e-08
ref|XP_012844656.1| PREDICTED: heterogeneous nuclear ribonucleop...    60   5e-08
ref|XP_007015061.1| RNA-binding family protein [Theobroma cacao]...    58   1e-07
ref|NP_001305590.1| heterogeneous nuclear ribonucleoprotein F [S...    58   2e-07
ref|XP_015058700.1| PREDICTED: heterogeneous nuclear ribonucleop...    58   2e-07
ref|XP_004250940.1| PREDICTED: heterogeneous nuclear ribonucleop...    58   2e-07
gb|KVH90793.1| Nucleotide-binding, alpha-beta plait [Cynara card...    57   3e-07
ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   3e-07
ref|XP_015571370.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   4e-07
ref|XP_012485391.1| PREDICTED: heterogeneous nuclear ribonucleop...    56   6e-07
gb|KHG07447.1| Heterogeneous nuclear ribonucleoprotein F [Gossyp...    56   6e-07
ref|XP_012485390.1| PREDICTED: heterogeneous nuclear ribonucleop...    56   6e-07
ref|XP_006446124.1| hypothetical protein CICLE_v10016322mg [Citr...    56   8e-07
ref|XP_012090010.1| PREDICTED: heterogeneous nuclear ribonucleop...    54   4e-06
emb|CDP19319.1| unnamed protein product [Coffea canephora]             54   5e-06
ref|XP_011090021.1| PREDICTED: RNA-binding protein sym-2-like is...    53   9e-06

>ref|XP_011080342.1| PREDICTED: epithelial splicing regulatory protein 1-like [Sesamum
           indicum]
          Length = 364

 Score = 62.8 bits (151), Expect = 4e-09
 Identities = 28/33 (84%), Positives = 28/33 (84%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           MFYRGKYVD GDARE G KRQRLMDQG  YYGT
Sbjct: 1   MFYRGKYVDSGDAREMGLKRQRLMDQGSSYYGT 33


>ref|XP_002513501.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform X1
           [Ricinus communis] gi|223547409|gb|EEF48904.1|
           heterogeneous nuclear ribonucleoprotein, putative
           [Ricinus communis]
          Length = 260

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +3

Query: 195 LETMFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           ++ MFYRG+Y DGGD RE G KRQRL+DQGP YYGT
Sbjct: 1   MDRMFYRGRYPDGGDGREMGAKRQRLVDQGPSYYGT 36


>ref|XP_009790464.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Nicotiana
           sylvestris]
          Length = 364

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           M+YRG YVDGGDARE GFKRQR+MDQG  YY T
Sbjct: 1   MYYRGNYVDGGDAREMGFKRQRIMDQGSSYYAT 33


>ref|XP_009619028.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Nicotiana
           tomentosiformis]
          Length = 365

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           M+YRG YVDGGDARE GFKRQR+MDQG  YY T
Sbjct: 1   MYYRGNYVDGGDAREMGFKRQRIMDQGSSYYAT 33


>ref|XP_012090009.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform X1
           [Jatropha curcas] gi|643705964|gb|KDP22096.1|
           hypothetical protein JCGZ_25927 [Jatropha curcas]
          Length = 258

 Score = 59.3 bits (142), Expect = 4e-08
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           MFYRG+Y DGGD RE G KRQRL+DQGP +YGT
Sbjct: 1   MFYRGRYPDGGDGREMGAKRQRLVDQGPSFYGT 33


>ref|XP_012844656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Erythranthe
           guttata] gi|604320410|gb|EYU31367.1| hypothetical
           protein MIMGU_mgv1a008522mg [Erythranthe guttata]
          Length = 371

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 26/32 (81%), Positives = 26/32 (81%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYG 299
           MFYRGKY DGGDARE G KRQRLMD G  YYG
Sbjct: 1   MFYRGKYADGGDAREMGLKRQRLMDHGSSYYG 32


>ref|XP_007015061.1| RNA-binding family protein [Theobroma cacao]
           gi|508785424|gb|EOY32680.1| RNA-binding family protein
           [Theobroma cacao]
          Length = 260

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           MFYRGKY DG D RE G KRQR++DQGP +YGT
Sbjct: 1   MFYRGKYTDGADGREMGAKRQRIIDQGPSFYGT 33


>ref|NP_001305590.1| heterogeneous nuclear ribonucleoprotein F [Solanum tuberosum]
           gi|82621148|gb|ABB86262.1| unknown [Solanum tuberosum]
          Length = 364

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           M+YRG Y+D GDARE GFKRQR+MDQG  YY T
Sbjct: 1   MYYRGNYMDSGDAREMGFKRQRIMDQGSSYYAT 33


>ref|XP_015058700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Solanum
           pennellii]
          Length = 364

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           M+YRG Y+D GDARE GFKRQR+MDQG  YY T
Sbjct: 1   MYYRGNYMDSGDAREMGFKRQRIMDQGSSYYAT 33


>ref|XP_004250940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Solanum
           lycopersicum]
          Length = 364

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           M+YRG Y+D GDARE GFKRQR+MDQG  YY T
Sbjct: 1   MYYRGNYMDSGDAREMGFKRQRIMDQGSSYYAT 33


>gb|KVH90793.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 356

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           MFYRGKYVD GD RE G KRQR++DQG  YYGT
Sbjct: 1   MFYRGKYVDVGDGREMGLKRQRVIDQGSSYYGT 33


>ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F [Cucumis
           sativus] gi|659097601|ref|XP_008449713.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein F [Cucumis melo]
           gi|700199023|gb|KGN54181.1| hypothetical protein
           Csa_4G291930 [Cucumis sativus]
          Length = 260

 Score = 57.0 bits (136), Expect = 3e-07
 Identities = 24/33 (72%), Positives = 26/33 (78%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           MFYRG Y DGGD RE G KRQR++DQG  YYGT
Sbjct: 3   MFYRGSYADGGDGREMGAKRQRIVDQGSSYYGT 35


>ref|XP_015571370.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X2
           [Ricinus communis]
          Length = 259

 Score = 56.6 bits (135), Expect = 4e-07
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +3

Query: 195 LETMFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           ++ MFYRG Y DGGD RE G KRQRL+DQGP YYGT
Sbjct: 1   MDRMFYRG-YPDGGDGREMGAKRQRLVDQGPSYYGT 35


>ref|XP_012485391.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform X2
           [Gossypium raimondii] gi|763768571|gb|KJB35786.1|
           hypothetical protein B456_006G128500 [Gossypium
           raimondii]
          Length = 260

 Score = 56.2 bits (134), Expect = 6e-07
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYG 299
           MFYRGKY DG D RE G KRQR++DQGP +YG
Sbjct: 1   MFYRGKYTDGADGREMGAKRQRIIDQGPSFYG 32


>gb|KHG07447.1| Heterogeneous nuclear ribonucleoprotein F [Gossypium arboreum]
          Length = 260

 Score = 56.2 bits (134), Expect = 6e-07
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYG 299
           MFYRGKY DG D RE G KRQR++DQGP +YG
Sbjct: 1   MFYRGKYTDGADGREMGAKRQRIIDQGPSFYG 32


>ref|XP_012485390.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F isoform X1
           [Gossypium raimondii]
          Length = 265

 Score = 56.2 bits (134), Expect = 6e-07
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYG 299
           MFYRGKY DG D RE G KRQR++DQGP +YG
Sbjct: 1   MFYRGKYTDGADGREMGAKRQRIIDQGPSFYG 32


>ref|XP_006446124.1| hypothetical protein CICLE_v10016322mg [Citrus clementina]
           gi|568832806|ref|XP_006470617.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein F [Citrus
           sinensis] gi|557548735|gb|ESR59364.1| hypothetical
           protein CICLE_v10016322mg [Citrus clementina]
           gi|641842342|gb|KDO61248.1| hypothetical protein
           CISIN_1g025001mg [Citrus sinensis]
          Length = 259

 Score = 55.8 bits (133), Expect = 8e-07
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           MFYRGK+ +G D RE G KRQRL+DQGP +YGT
Sbjct: 1   MFYRGKFAEGADGREMGAKRQRLIDQGPSFYGT 33


>ref|XP_012090010.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X2
           [Jatropha curcas]
          Length = 257

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           MFYRG Y DGGD RE G KRQRL+DQGP +YGT
Sbjct: 1   MFYRG-YPDGGDGREMGAKRQRLVDQGPSFYGT 32


>emb|CDP19319.1| unnamed protein product [Coffea canephora]
          Length = 368

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYG 299
           MFYRGKYVD  DARE G KRQR+MD G  Y+G
Sbjct: 1   MFYRGKYVDSSDAREMGLKRQRVMDHGSSYFG 32


>ref|XP_011090021.1| PREDICTED: RNA-binding protein sym-2-like isoform X1 [Sesamum
           indicum]
          Length = 362

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 26/33 (78%), Positives = 26/33 (78%)
 Frame = +3

Query: 204 MFYRGKYVDGGDARETGFKRQRLMDQGPPYYGT 302
           MFYRGKY D  DARE GFKRQRL DQG  YYGT
Sbjct: 1   MFYRGKYRDSDDAREMGFKRQRL-DQGSSYYGT 32


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