BLASTX nr result
ID: Rehmannia28_contig00019182
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00019182
(4213 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isof... 639 0.0
ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648... 617 0.0
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays] 634 0.0
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group] 619 0.0
gb|AAO23078.1| polyprotein [Glycine max] 589 0.0
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri] 544 0.0
ref|XP_013658015.1| PREDICTED: uncharacterized protein LOC106362... 587 0.0
ref|XP_008779305.1| PREDICTED: transposon Ty3-G Gag-Pol polyprot... 585 0.0
gb|ACB28472.1| polyprotein [Ananas comosus] 541 0.0
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 590 0.0
gb|ABA91843.2| retrotransposon protein, putative, unclassified [... 590 0.0
gb|ABF94845.1| retrotransposon protein, putative, unclassified [... 607 0.0
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera] 607 0.0
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja... 585 0.0
gb|ABF93966.1| retrotransposon protein, putative, unclassified, ... 585 0.0
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 542 0.0
ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075, p... 518 0.0
ref|XP_010468466.1| PREDICTED: uncharacterized protein LOC104748... 544 0.0
gb|AAK92545.1|AC051624_3 Putative retroelement [Oryza sativa Jap... 505 0.0
gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Ja... 501 0.0
>ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
gi|670423336|ref|XP_008652482.1| PREDICTED: transposon
Tf2-1 polyprotein isoform X1 [Zea mays]
Length = 1567
Score = 639 bits (1649), Expect(3) = 0.0
Identities = 316/617 (51%), Positives = 430/617 (69%), Gaps = 1/617 (0%)
Frame = -1
Query: 2083 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 1904
K+ +LRGFLGLTGYYRKF++ YG+L+KPLT+LL++ +F W A+TAF LKDAM+T P
Sbjct: 866 KSHTELRGFLGLTGYYRKFVKGYGILAKPLTVLLQQKQFGWPPSAQTAFEALKDAMITTP 925
Query: 1903 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 1724
VL LP+F++ FV+ETDA TG+GAVL Q+G P+A+ SK L N LS ++EFLA+LMA
Sbjct: 926 VLALPNFSETFVIETDACDTGIGAVLSQKGHPVAFYSKALGVKNSQLSTYEKEFLAILMA 985
Query: 1723 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 1544
++KW+ YL F+I+TD ++L +L DQ + T MQ+K +T+L GL + +QYKKG EN+
Sbjct: 986 VEKWRCYLSRGPFVIRTDHRSLCHLQDQTLATDMQKKAMTKLAGLQFSVQYKKGAENKAA 1045
Query: 1543 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1364
D LSR +A++ TP WLQE+ NSY D+ ++A + F ++ G+
Sbjct: 1046 DALSRV-AHNMELSAISATTPVWLQEITNSYELDTHAQSLLAELAVSSPNEQGFELKNGL 1104
Query: 1363 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1184
+ RL +G + L++ +++A H S GGHSG+ TY R+K +F W +K DV Q V+
Sbjct: 1105 IYKNNRLVVGQNVGLQTKLISAFHASPLGGHSGIQATYQRVKKLFLWNGLKADVEQFVRQ 1164
Query: 1183 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1004
C C+ K ++ YPGLLQPL +P +W+ ++MDFIEGLPKS G +VILVVVDR TKYAH
Sbjct: 1165 CHVCQQAKHEHCKYPGLLQPLPIPQSSWQDLSMDFIEGLPKSNGYSVILVVVDRLTKYAH 1224
Query: 1003 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 824
F+A+ HPF+AS++A LF + +LHG P +IVSDRDK+FTS FW+ELFKL G L +SSA
Sbjct: 1225 FLAVKHPFTASHIAHLFFSQVVKLHGFPHTIVSDRDKVFTSTFWQELFKLSGTQLHLSSA 1284
Query: 823 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 644
YHPQSDGQTER+N CLE +LRC VH +P W +WL AE WYNT+YHTS+K + F+ALYG
Sbjct: 1285 YHPQSDGQTERVNQCLEMFLRCAVHNSPSQWAKWLDSAELWYNTSYHTSIKCSPFKALYG 1344
Query: 643 YPPPLLSIGPYLDS-SINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEV 467
P L I P DS + +EA + QRQ ++V++ NL A +R+K YAD +RS + F++
Sbjct: 1345 VEPNLGCI-PVTDSLNPSEAQLTLQQRQEFLEVIKTNLASAQSRMKHYADLNRSFRQFQI 1403
Query: 466 GDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVP 287
GD V+LKLQPF Q SV+ R KLS +Y+GP+ +++K+G AY+L L E + IHPVFHV
Sbjct: 1404 GDLVYLKLQPFAQVSVAYRPCAKLSFKYFGPFKIVDKVGSAAYKLLLPESANIHPVFHVS 1463
Query: 286 LLKKRVSDGTQPSPELP 236
LK V D T ELP
Sbjct: 1464 QLKTHVPDYTPVFTELP 1480
Score = 352 bits (903), Expect(3) = 0.0
Identities = 194/451 (43%), Positives = 274/451 (60%), Gaps = 15/451 (3%)
Frame = -2
Query: 3387 MS*NALVGEDGVTTMRLYGESSDHILHILIDSGSTLSFIQESTTKKLGCELKSIKLLLVK 3208
+S NA+ G + +R+ D ++ L+DSGS+ +FI E ++GCE ++I+ + VK
Sbjct: 423 VSLNAMSGTNNPRCVRIQALIKDQLILQLLDSGSSNTFISELACSRIGCETQNIEPVAVK 482
Query: 3207 VANGQKMVSSHVVDGFQWKMQGHTFTYPLRLLQNEGCDMILGGDWLKSCTPIELDYDKMT 3028
VAN Q + V +W G TFT +L DM+LG DWL+ +P+ D+D+
Sbjct: 483 VANEQIIYCQKKVVQLKWWCGGKTFTVDAFVLPATAYDMVLGMDWLEKFSPMLCDWDRKW 542
Query: 3027 FTVNLLGRRVKIQELTSLAEC-----------KFISGPSLYKLMHMSCPTEIEEMYWVTV 2881
+ G R+++Q + + + ++ G ++ + + T E+ VT
Sbjct: 543 VEFSYEGVRIRLQGVGNKSAALLPEASHEQIQRWHKGNEIWAVALLQQVTP--ELKVVTG 600
Query: 2880 DGPSFEDNPDMQILLTKFQDVIAEPKGLPPSRGVEHQILIKQGSEPKHQFPYRTSHA*KN 2701
P +Q +L +F++V P LPPSR +H I + G+ P + PYR S K+
Sbjct: 601 QVPEC-----VQEVLDQFKEVFKTPDSLPPSREYDHTISLLPGTTPVNVRPYRYSPLQKD 655
Query: 2700 EIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYLNGLTIKYDYPIPVID 2521
EIER ++EML+A I S SPFASPV+LVKKKD +WR CVDYR LN +T+K +P+P+ID
Sbjct: 656 EIERQVQEMLQAGTITRSVSPFASPVLLVKKKDGSWRFCVDYRKLNDITVKNKFPMPIID 715
Query: 2520 E----LFGAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFLVMPFGLCNAPATFQ 2353
E L GAK FSK+D+ +G+ QI M + T F TH+GH++F VMPFGL NAPATFQ
Sbjct: 716 EFIDELAGAKVFSKLDMAAGFHQIRMADQDEMKTAFKTHHGHFQFRVMPFGLTNAPATFQ 775
Query: 2352 SLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNNQLYVKRSKCNFGQL 2173
LMN +F++ +RK VL+F DDIL+YS S E H++HLQQVF L +QLY KRSKC F
Sbjct: 776 CLMNAVFQQLMRKCVLIFMDDILVYSPSLETHVVHLQQVFQVLETHQLYAKRSKCAFALT 835
Query: 2172 EIEYIGHIISHYGVAIDPQKISSMVQWPTPK 2080
+IEY+GHIIS GV+ DP K SM +WPTPK
Sbjct: 836 QIEYLGHIISDKGVSTDPSKTESMRRWPTPK 866
Score = 53.5 bits (127), Expect(3) = 0.0
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = -3
Query: 203 PFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSFNPWGQGLSPPRGI 24
P R+LD R+VK+ V Q+LI+W + V+ A+WED ++ +FP+ + WG + G
Sbjct: 1492 PERILDRRLVKKGSAAVTQILIKWEGIPVEMASWEDYTVLQSRFPNSSIWGPAGASGGGT 1551
Query: 23 VMNM 12
V ++
Sbjct: 1552 VTSV 1555
>ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648418 [Zea mays]
Length = 1853
Score = 617 bits (1591), Expect(3) = 0.0
Identities = 309/620 (49%), Positives = 424/620 (68%)
Frame = -1
Query: 2068 LRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPVLTLP 1889
LRGFLGLTGYYR+F++ YG +++PLT LL+K F WT EAE AF LK AMV+ PVL LP
Sbjct: 935 LRGFLGLTGYYRRFVQGYGAIARPLTRLLQKGAFQWTSEAEMAFQRLKQAMVSTPVLALP 994
Query: 1888 DFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAIQKWK 1709
DF PFV+ETDA GVGAVLMQ GRPIA++SK L +Q LSI ++EF+A++MA+ W+
Sbjct: 995 DFNIPFVVETDACDDGVGAVLMQRGRPIAFLSKALGIKSQKLSIYEKEFIALIMAVDHWR 1054
Query: 1708 HYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVDTLSR 1529
HYL +F I+TD +AL +L Q + + +Q+K + +L+GL +++ YK+G +N+V D LSR
Sbjct: 1055 HYLQRSEFEIRTDHKALSFLGSQDLHSELQRKAMAKLMGLQFKVVYKQGKDNKVADALSR 1114
Query: 1528 RDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIVRYKG 1349
A++ + P W+QEV NSY D ++A + + + G++R G
Sbjct: 1115 VGAVMA-LTAVSEVQPLWIQEVTNSYVTDPAAQSLLARLCVHNPDEHGYSLSQGVIRKGG 1173
Query: 1348 RLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSCDTCK 1169
+ +G + LR+ ++AA+H+SA GGHSG++ TY RLK +F W MK DV V+ C C+
Sbjct: 1174 LIWVGQNSALRTKLVAAVHDSAAGGHSGMHATYHRLKKLFVWKGMKSDVADFVQQCQICQ 1233
Query: 1168 LNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHFMALS 989
K + GLL PL +P AW+ ITMDFIE LP+S G + ILVVVDRFTKYAHF+AL
Sbjct: 1234 QAKGERVHPAGLLHPLPIPQGAWQDITMDFIEKLPQSGGCDTILVVVDRFTKYAHFIALK 1293
Query: 988 HPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAYHPQS 809
HPF+AS VA++ LD + RLHGLP SIVSDRDKIFTS FW +LFK++G L++S+AYHPQ+
Sbjct: 1294 HPFTASQVAQVILDQVVRLHGLPKSIVSDRDKIFTSAFWTQLFKILGTKLNLSTAYHPQT 1353
Query: 808 DGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGYPPPL 629
DGQ+ER+N C+E YLRC VH P W WLSLAEFWYNT+YHTSL + F+ LYGY PP
Sbjct: 1354 DGQSERVNQCVEMYLRCAVHAQPTKWKTWLSLAEFWYNTSYHTSLACSPFKVLYGYDPPF 1413
Query: 628 LSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVGDQVFL 449
+ + + ++ +R + +LR+ L A NR+K AD+ R+++ F+VGD V L
Sbjct: 1414 AAAPSVPSDTAADVAQVLVERAQFTAMLREQLAAAQNRMKLRADRLRTDRQFQVGDMVLL 1473
Query: 448 KLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPLLKKRV 269
KLQP+ Q+SV R KL+ +++GPY ++E++G VAYRL+L +++HPVFHV LK +
Sbjct: 1474 KLQPYAQHSVVSRPCPKLAFKFFGPYKIVERVGAVAYRLELPASAQVHPVFHVSQLKPFI 1533
Query: 268 SDGTQPSPELPLADSEGNSR 209
D T LP A S+ +SR
Sbjct: 1534 PDYTPVFSNLP-AYSDLSSR 1552
Score = 350 bits (899), Expect(3) = 0.0
Identities = 192/453 (42%), Positives = 269/453 (59%), Gaps = 14/453 (3%)
Frame = -2
Query: 3399 EEVQMS*NALVGEDGVTTMRLYGESSDHILHILIDSGSTLSFIQESTTKKLGCELKSIKL 3220
E ++S NAL G M + + ++ +L+DSGS+ SFI + ++G +
Sbjct: 487 ENFRLSLNALSGTTNEECMAVCALLQNQVMLVLVDSGSSTSFINKQLVDRIGLTVHPCAS 546
Query: 3219 LLVKVANGQKMVSSHVVDGFQWKMQGHTFTYPLRLLQNEGCDMILGGDWLKSCTPIELDY 3040
V+VANG+ M S +V +W GHT+ +R+L D ILG DWL+ +P+ D+
Sbjct: 547 CKVRVANGEIMYSDTMVRSLEWWANGHTYQNDMRVLGLGAYDAILGYDWLRRHSPMHCDW 606
Query: 3039 DKMTFT-------VNLLGRRVK---IQELTSLAECKFISGPSLYKLMHMSCPTEIEEMYW 2890
D + V L+G K +QE++SL +++ G ++ +EE+
Sbjct: 607 DAQVISFVDKGIEVQLVGNHPKQQVVQEVSSLQVERWLRGNDIWVF------ALLEEV-- 658
Query: 2889 VTVDGPSFEDNPDMQILLTKFQDVIAEPKGLPPSRGVEHQILIKQGSEPKHQFPYRTSHA 2710
S E + D+Q LL +F D+ P LPPSR +H I + GS P + PY+ S
Sbjct: 659 --TAASSNEIHTDLQGLLGEFMDIFEAPTVLPPSRPFDHHIPLLPGSIPVNARPYKYSPH 716
Query: 2709 *KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYLNGLTIKYDYPIP 2530
K EIER + ++L++ +I S SPFASPV+LV+KKD TWR CVDYR LN +TIK +P+P
Sbjct: 717 HKTEIERQVADLLKSGLITPSVSPFASPVLLVQKKDGTWRFCVDYRKLNDMTIKNRFPMP 776
Query: 2529 VI----DELFGAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFLVMPFGLCNAPA 2362
V+ DEL G + FS +D+ SGY QI M F T F TH GHY+F VMPFGL NAPA
Sbjct: 777 VVEEILDELAGTEIFSSLDMTSGYHQIRMGVSEEFKTAFKTHQGHYQFRVMPFGLTNAPA 836
Query: 2361 TFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNNQLYVKRSKCNF 2182
TFQ MN + +LRKFV+VF DDIL+YS +W+ HL HL+ VF LR+++ Y+K KC F
Sbjct: 837 TFQCAMNLVLAPFLRKFVMVFIDDILVYSPNWQSHLEHLRLVFTALRHHKFYLKERKCVF 896
Query: 2181 GQLEIEYIGHIISHYGVAIDPQKISSMVQWPTP 2083
GQ E+ Y+GHIIS GVA DP+K +M++WP P
Sbjct: 897 GQKELSYLGHIISGNGVATDPKKTDAMLKWPKP 929
Score = 57.8 bits (138), Expect(3) = 0.0
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = -3
Query: 209 IEPFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSFNPWGQ 48
++P +LD R+VK+ VPQVLI+W+ L D TWED + +++P+ WGQ
Sbjct: 1554 VQPLEILDRRLVKKGNRAVPQVLIRWSLLPDDATTWEDYNVLRQRYPNAIAWGQ 1607
>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 634 bits (1634), Expect(3) = 0.0
Identities = 308/616 (50%), Positives = 436/616 (70%), Gaps = 3/616 (0%)
Frame = -1
Query: 2074 KQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDK-FLWTHEAETAFLTLKDAMVTAPVL 1898
K+LR FLGL G+YRKF++++G++S+PL LLKK F+WT + AF LK A+VTAPVL
Sbjct: 869 KELRCFLGLAGFYRKFVKHFGIISRPLFDLLKKHTLFVWTVDHSKAFEVLKQALVTAPVL 928
Query: 1897 TLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAIQ 1718
LPDF++PF + TDAS GVGAVLMQ G P+A++SK L P NQ LS ++E++A+++AI
Sbjct: 929 ALPDFSQPFCIHTDASYYGVGAVLMQSGHPLAFLSKALGPKNQGLSTYEKEYMAIILAIA 988
Query: 1717 KWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVDT 1538
+W+ YL +F+I TD ++L L +QR+ T QQK T+L GL Y+I Y+KG +N D
Sbjct: 989 QWRSYLQLAEFIIYTDHRSLAQLNEQRLHTIWQQKMYTKLAGLQYKIVYRKGVDNGAADA 1048
Query: 1537 LSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIVR 1358
LSR+ ++ +C A++ PTWLQEV+ Y D +++A L+ F + GI+R
Sbjct: 1049 LSRKVQEDSHCCAISHSVPTWLQEVVEGYDKDPTSKQLLAQLILNSADKAPFSLHQGIIR 1108
Query: 1357 YKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSCD 1178
+K R+ +G + +L+ +L AMH++A GGHSG TY ++K +FYWP M+ DV+Q V+SC
Sbjct: 1109 HKNRIWLGGNLQLQQKVLQAMHDTAVGGHSGAPATYHKVKQMFYWPGMRADVLQYVQSCT 1168
Query: 1177 TCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHFM 998
C+ +KPD YPGLLQPL VP QAW I++DFIEGLP+S N ILVVVD+F+KY HF+
Sbjct: 1169 VCQQSKPDRAKYPGLLQPLEVPPQAWHTISLDFIEGLPRSAHYNCILVVVDKFSKYGHFL 1228
Query: 997 ALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAYH 818
L HPF+A+ VA++FLD +Y+LHGLPV+I+SDRD+IFTS+FW++LF++ G +L MSS+YH
Sbjct: 1229 PLLHPFTAAKVARVFLDNVYKLHGLPVNIISDRDRIFTSSFWQQLFQITGTNLSMSSSYH 1288
Query: 817 PQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGYP 638
PQSDGQTERLN CLE +LRC VH P W WLS+AE+WYNT H++L T F+ LYG+
Sbjct: 1289 PQSDGQTERLNQCLETFLRCYVHTCPSRWSAWLSVAEYWYNTTVHSTLGRTPFEVLYGHT 1348
Query: 637 PPLLSIGPYLDSSI--NEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVG 464
P G +D+ + E + +R+ +V++ +L +A +R+K ADK RSE+ F VG
Sbjct: 1349 P--RHFGILVDTVVPQPELETWLKERELMTKVIKLHLHRAQDRMKRQADKQRSERVFSVG 1406
Query: 463 DQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPL 284
D V+LKLQP+ Q+SV+ R + KLS +++GP+ + +++G VAYRL L S IHP+FHV
Sbjct: 1407 DWVYLKLQPYIQSSVATRSNHKLSFKFFGPFQITDRLGSVAYRLALPASSSIHPIFHVSQ 1466
Query: 283 LKKRVSDGTQPSPELP 236
LK+ + + SP+LP
Sbjct: 1467 LKRVIGRDQRASPQLP 1482
Score = 345 bits (886), Expect(3) = 0.0
Identities = 193/441 (43%), Positives = 264/441 (59%), Gaps = 4/441 (0%)
Frame = -2
Query: 3393 VQMS*NALVGEDGVTTMRLYGESSDHILHILIDSGSTLSFIQESTTKKLGCELKSIKLLL 3214
V +S +A G G T++L G +H L ILIDSGS+ +F+ + L L
Sbjct: 439 VTISKSAWTGSTGRQTLKLNGSIQNHPLLILIDSGSSHTFLNDQLRPHLQGVTSMASTLQ 498
Query: 3213 VKVANGQKMVSSHVVDGFQWKMQGHTFTYPLRLLQNEGCDMILGGDWLKSCTPIELDYDK 3034
V+VANG + + + QW++Q +FT + L DM++G DWL+S +P+ +D+ +
Sbjct: 499 VQVANGAMVTCHYKLLQAQWQIQNCSFTSDVSFLPLPYYDMVVGMDWLESFSPMRVDWAQ 558
Query: 3033 MTFTVNLLGRRVKIQELTSLAECKFISGPSLYKLMHMSCPTEIEEMYWVTVDGPSFEDNP 2854
+ G V +Q T+ + ++ +L+ M + + S + +P
Sbjct: 559 KWLIIPYQGSSVLLQGNTA-----GVPADTVIELLFMESASSVSS---------SPDSHP 604
Query: 2853 DMQILLTKFQDVIAEPKGLPPSRGVEHQILIKQGSEPKHQFPYRTSHA*KNEIERIIKEM 2674
+Q LL +F V AEP+GLPPSR +H I + +G++P PYR A K++IE+ ++EM
Sbjct: 605 AIQALLQQFSSVFAEPQGLPPSRDCDHAIPLVEGAQPVSVRPYRYPPALKDKIEKQVQEM 664
Query: 2673 LEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYLNGLTIKYDYPIPV----IDELFGA 2506
L +IQ S S FASPV+LVKKKD TWR CVDYRYLN LT+K YP+PV IDEL +
Sbjct: 665 LHQGVIQKSNSSFASPVLLVKKKDMTWRFCVDYRYLNALTLKSKYPVPVFDQLIDELAHS 724
Query: 2505 KFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFLVMPFGLCNAPATFQSLMNQIFRE 2326
K+FSK+DLR+GY QIL+KP + T F TH GHYEF VM FGL AP TF S MN+ +
Sbjct: 725 KWFSKLDLRAGYHQILLKPGEEYKTAFQTHVGHYEFRVMAFGLTGAPNTFLSAMNETLKP 784
Query: 2325 YLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNNQLYVKRSKCNFGQLEIEYIGHII 2146
LRK LVFFDDILIYSKS+EEHLLHLQ+V L ++ VK SKC F + Y+GHII
Sbjct: 785 VLRKCALVFFDDILIYSKSFEEHLLHLQKVLQLLLSDNWKVKLSKCEFAKTNTAYLGHII 844
Query: 2145 SHYGVAIDPQKISSMVQWPTP 2083
S GV+ P KI ++ W P
Sbjct: 845 SEQGVSTYPSKIQAISSWAVP 865
Score = 44.3 bits (103), Expect(3) = 0.0
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -3
Query: 203 PFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSFNPWGQGLSPPRGI 24
P R+L R + R ++ QV + W+ + D ATWED + + +FP W Q + +G
Sbjct: 1491 PTRILQRRFIDRGGELIAQVKVVWSGMTEDLATWEDVEALRARFPKALIWDQAGARGQGN 1550
Query: 23 V 21
V
Sbjct: 1551 V 1551
>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 619 bits (1597), Expect(3) = 0.0
Identities = 309/612 (50%), Positives = 422/612 (68%), Gaps = 3/612 (0%)
Frame = -1
Query: 2074 KQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKD-KFLWTHEAETAFLTLKDAMVTAPVL 1898
K+LRGFLGL GYYRKF++N+G++SKPLT LL+K ++WT E + AF TLK A+ +APVL
Sbjct: 850 KKLRGFLGLAGYYRKFVKNFGIISKPLTQLLRKGVPYVWTTETDNAFHTLKQALASAPVL 909
Query: 1897 TLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAIQ 1718
+LPDF K F +ETDAS G+GAVL Q+ PIAY+SK L P + LS ++E +A+L+A+
Sbjct: 910 SLPDFQKTFTVETDASDCGIGAVLSQDKHPIAYVSKALGPRTRGLSTYEKECMAILLAVD 969
Query: 1717 KWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVDT 1538
W+ YL +F+I TD +L +L DQR+ TP Q K T+LLGL Y+I Y+KG+ N D
Sbjct: 970 HWRSYLQHGEFIILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYKICYRKGSSNAAADA 1029
Query: 1537 LSRRDVKEDNCN--ALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1364
LSR+ ++ N A+++ P WL EV Y D+ AK+++ + P + + + GI
Sbjct: 1030 LSRK-FQDSNSEIFAISSSVPQWLMEVTQGYEKDAQAAKLLSTLAIHPEKHIHYFLDNGI 1088
Query: 1363 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1184
+RYK R+ +G++P+L+ ++ +H S GGHSG TY ++K +F WP MK + + V+
Sbjct: 1089 IRYKNRIWVGNNPELQLKLIRELHASPVGGHSGFPVTYRKIKQLFAWPNMKKMIKESVQR 1148
Query: 1183 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1004
C C KPD YPGLLQPL VP +W+ +++DFIEGLPKS G N ILVVVDRF+KYAH
Sbjct: 1149 CQVCLQAKPDRLKYPGLLQPLPVPEGSWQAVSLDFIEGLPKSAGYNCILVVVDRFSKYAH 1208
Query: 1003 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 824
F+AL HPF+A +VA+ ++ IY+LHGLP +IVSDRDKIFTS W++LF G L SSA
Sbjct: 1209 FVALKHPFTAIDVAQAYMFHIYKLHGLPQTIVSDRDKIFTSQLWEQLFLRAGTKLHYSSA 1268
Query: 823 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 644
YHPQSDGQTER+N CLE YLRC VH P W+ WL LAE+WYN+ YH+SL TT F+ LYG
Sbjct: 1269 YHPQSDGQTERVNQCLEIYLRCFVHSTPSKWYSWLHLAEYWYNSTYHSSLGTTPFEVLYG 1328
Query: 643 YPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVG 464
YPP I D +I E + R+ Q+++ +L +A ++K +ADK RS + F +G
Sbjct: 1329 YPPNHFGISS-RDCAIPELSVWLRDRKFMQQLVQQHLHRAQQQMKHFADKKRSFRQFTIG 1387
Query: 463 DQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPL 284
D V+LKLQP+ Q+SV+ R + KL+ +YYGP+ V++K+G VAY+L L E S +HPVFHV L
Sbjct: 1388 DWVYLKLQPYVQSSVAPRANHKLAFKYYGPFQVIDKLGTVAYKLQLPETSSVHPVFHVSL 1447
Query: 283 LKKRVSDGTQPS 248
LK TQP+
Sbjct: 1448 LKP-AKGFTQPA 1458
Score = 343 bits (879), Expect(3) = 0.0
Identities = 196/464 (42%), Positives = 273/464 (58%), Gaps = 5/464 (1%)
Frame = -2
Query: 3459 YLLQTFPVEEDIVETQSCIMEEVQMS*NALVGEDGVTTMRLYGESSDHILHILIDSGSTL 3280
Y ++ P ED ++Q + + +S A+ G + T++L G D L +L+DSGST
Sbjct: 386 YESESDPKSEDTEDSQHGTL--LSISQQAVWGTESSRTIKLRGWIQDMELLMLVDSGSTH 443
Query: 3279 SFIQESTTKKLGCELKSIKLLLVKVANGQKMVSSHVVDGFQWKMQGHTFTYPLRLLQNEG 3100
SFI + +L K L V++A+G M +H + W MQG+ F R+L
Sbjct: 444 SFIDSEVSLRLPGVHKLQTPLTVRIADGGTMKCTHEISSCNWWMQGNQFCNSFRVLPLGN 503
Query: 3099 CDMILGGDWLKSCTPIELDYDKMTFTVNLLGRRVKIQE-LTSLAECKFISGPSLYKLMHM 2923
D+ILG DWL+ +P+++D+ G+ V++Q L +C I+ L L +
Sbjct: 504 YDIILGMDWLELFSPMQVDWANKWMEFLYQGKLVRLQGILPKSVQCSSITNHQLCGLNRL 563
Query: 2922 SCPTEIEEMYWVTVDGPSFEDNPDMQILLTKFQDVIAEPKGLPPSRGVEHQILIKQGSEP 2743
+ + ++ VT + S +I+ F D+ EP+GLPP R +H I + G++P
Sbjct: 564 GSLSYLVQLQSVTHEENSSVPEAVKEII-QDFHDIFQEPEGLPPRRACDHTINLIPGAKP 622
Query: 2742 KHQFPYRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYLN 2563
+ PYR + A K+EIE+ I EML + +IQ+S+SPF+SP ILVKKKD TWRL +DYR LN
Sbjct: 623 INLRPYRHNPALKDEIEKQITEMLSSGVIQHSQSPFSSPAILVKKKDGTWRLVIDYRQLN 682
Query: 2562 GLTIKYDYPIPVI----DELFGAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFL 2395
+T+K YP+PVI DEL GAK+F+K+DLRSGY QI M T F TH+GHYE+
Sbjct: 683 NITVKTKYPVPVIEELLDELTGAKWFTKLDLRSGYHQIRMAEGEEPKTAFQTHSGHYEYK 742
Query: 2394 VMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNN 2215
VM FGL APATF MN + LRKF LVFFDDILIYS + HL HL+QV LRN+
Sbjct: 743 VMSFGLTGAPATFLKAMNDTLKSVLRKFALVFFDDILIYSPTLSSHLEHLKQVLQLLRNH 802
Query: 2214 QLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTP 2083
VK SKC+FGQ ++ Y+GHII GVA DP K+ ++ W P
Sbjct: 803 HWKVKLSKCSFGQQQLSYLGHIIGVNGVATDPSKVQDVLDWAVP 846
Score = 54.7 bits (130), Expect(3) = 0.0
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = -3
Query: 203 PFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSFNPWGQGLSPPRGI 24
P +LD R+ K+ +++ QVLI W++ ++ATWED + ++ +FP+ WGQ GI
Sbjct: 1472 PLAILDQRLAKKGNSVITQVLIHWSHTVPEQATWEDLEDLKTRFPNALAWGQAKIQGEGI 1531
Query: 23 V 21
V
Sbjct: 1532 V 1532
>gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 589 bits (1518), Expect(3) = 0.0
Identities = 306/615 (49%), Positives = 409/615 (66%)
Frame = -1
Query: 2077 LKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPVL 1898
+KQLRGFLGLTGYYR+FI++Y ++ PLT LL+KD FLW +EAE AF+ LK AM APVL
Sbjct: 824 VKQLRGFLGLTGYYRRFIKSYANIAGPLTDLLQKDSFLWNNEAEAAFVKLKKAMTEAPVL 883
Query: 1897 TLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAIQ 1718
+LPDF++PF+LETDASG GVGAVL Q G PIAY SK L P Q S RE LA+ A+
Sbjct: 884 SLPDFSQPFILETDASGIGVGAVLGQNGHPIAYFSKKLAPRMQKQSAYTRELLAITEALS 943
Query: 1717 KWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVDT 1538
K++HYL G+KF+I+TDQ++LK L+DQ + TP QQ W+ + LG D++I+YK G +N+ D
Sbjct: 944 KFRHYLLGNKFIIRTDQRSLKSLMDQSLQTPEQQAWLHKFLGYDFKIEYKPGKDNQAADA 1003
Query: 1537 LSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIVR 1358
LSR + A + +L+E+ +D K + + VR G++
Sbjct: 1004 LSRMFML-----AWSEPHSIFLEELRARLISDPHL-KQLMETYKQGADASHYTVREGLLY 1057
Query: 1357 YKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSCD 1178
+K R+ I ++ ++ + IL H+S GGH+G+ T RLK FYWPKM++DV ++ C
Sbjct: 1058 WKDRVVIPAEEEIVNKILQEYHSSPIGGHAGITRTLARLKAQFYWPKMQEDVKAYIQKCL 1117
Query: 1177 TCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHFM 998
C+ K +N GLLQPL +P Q W+ + MDFI GLP S G +VI+VV+DR TKYAHF+
Sbjct: 1118 ICQQAKSNNTLPAGLLQPLPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFI 1177
Query: 997 ALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAYH 818
L +++ VA+ F+ I +LHG+P SIVSDRD++FTS FW+ LFKL G +L MSSAYH
Sbjct: 1178 PLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYH 1237
Query: 817 PQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGYP 638
PQSDGQ+E LN CLE YLRC +E+PK W + L AEFWYNT YH SL T F+ALYG
Sbjct: 1238 PQSDGQSEVLNKCLEMYLRCFTYEHPKGWVKALPWAEFWYNTAYHMSLGMTPFRALYGRE 1297
Query: 637 PPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVGDQ 458
PP L+ E + ++ R + L+ NL +A +K ADK R + SF++GD+
Sbjct: 1298 PPTLTRQACSIDDPAEVREQLTDRDALLAKLKINLTRAQQVMKRQADKKRLDVSFQIGDE 1357
Query: 457 VFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPLLK 278
V +KLQP+RQ+S LRK+ KLS RY+GP+ VL KIG VAY+L+L ++IHPVFHV LK
Sbjct: 1358 VLVKLQPYRQHSAVLRKNQKLSMRYFGPFKVLAKIGDVAYKLELPSAARIHPVFHVSQLK 1417
Query: 277 KRVSDGTQPSPELPL 233
+GT P LPL
Sbjct: 1418 P--FNGTAQDPYLPL 1430
Score = 368 bits (944), Expect(3) = 0.0
Identities = 205/482 (42%), Positives = 283/482 (58%), Gaps = 24/482 (4%)
Frame = -2
Query: 3456 LLQTFPVEEDIVETQSCIMEEVQM-------S*NALVGEDGVTTMRLYGESSDHILHILI 3298
LLQ +ED + Q + EE M S NA+ G +GV T+R G+ + IL+
Sbjct: 347 LLQLEETDEDQTDEQVMVTEEANMDDDTHHLSLNAMRGSNGVGTIRFTGQVGGIAVKILV 406
Query: 3297 DSGSTLSFIQESTTKKLGCELKSIKLLLVKVANGQKMVSSHVVDGFQWKMQGHTFTYPLR 3118
D GS+ +FIQ + L ++ L V V NGQ + + +V +QG P+
Sbjct: 407 DGGSSDNFIQPRVAQVLKLPVEPAPNLRVLVGNGQILSAEGIVQQLPLHIQGQEVKVPVY 466
Query: 3117 LLQNEGCDMILGGDWLKSCTPIELDYDKMTFT-------VNLLGR------RVKIQELTS 2977
LLQ G D+ILG WL + P DY +T + L G + ++
Sbjct: 467 LLQISGADVILGSTWLATLGPHVADYAALTLKFFQNDKFITLQGEGNSEATQAQLHHFRR 526
Query: 2976 LAECKFISGPSLYKLMHMSCPTEIEEMYWVTVDGPSFEDNPDMQILLTKFQDVIAEPKGL 2797
L K I +L+ P + + +D P++ ILL + V A P L
Sbjct: 527 LQNTKSIEECFAIQLIQKEVPEDTLKDLPTNID-------PELAILLHTYAQVFAVPASL 579
Query: 2796 PPSRGVEHQILIKQGSEPKHQFPYRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVIL 2617
PP R +H I +KQGS P PYR H K++IE++I+EML IIQ S SPF+ P++L
Sbjct: 580 PPQREQDHAIPLKQGSGPVKVRPYRYPHTQKDQIEKMIQEMLVQGIIQPSNSPFSLPILL 639
Query: 2616 VKKKDSTWRLCVDYRYLNGLTIKYDYPIPVIDELF----GAKFFSKIDLRSGYFQILMKP 2449
VKKKD +WR C DYR LN +T+K +P+P +DEL GA++FSK+DLRSGY QIL++P
Sbjct: 640 VKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELHGAQYFSKLDLRSGYHQILVQP 699
Query: 2448 EHRFLTTFSTHNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKS 2269
E R T F TH+GHYE+LVMPFGL NAPATFQ LMN+IF+ LRKFVLVFFDDILIYS S
Sbjct: 700 EDREKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQFALRKFVLVFFDDILIYSAS 759
Query: 2268 WEEHLLHLQQVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWP 2089
W++HL HL+ V TL+ +QL+ + SKC+FG E++Y+GH +S GV+++ K+ +++ WP
Sbjct: 760 WKDHLKHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKVSGLGVSMENTKVQAVLDWP 819
Query: 2088 TP 2083
TP
Sbjct: 820 TP 821
Score = 51.2 bits (121), Expect(3) = 0.0
Identities = 21/50 (42%), Positives = 34/50 (68%)
Frame = -3
Query: 209 IEPFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSFN 60
++P ++L RI+ R N + Q+L+QW N D+ATWED + I+ +P+FN
Sbjct: 1441 MQPVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKASYPTFN 1490
>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
Length = 1557
Score = 544 bits (1402), Expect(3) = 0.0
Identities = 281/604 (46%), Positives = 390/604 (64%), Gaps = 3/604 (0%)
Frame = -1
Query: 2080 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 1901
T KQLR FLGLT YYR+FI+ Y ++++PLT +LKKD FLW EA AF LK A+ ++PV
Sbjct: 912 TQKQLRSFLGLTNYYRRFIQGYSIIARPLTNMLKKDGFLWCSEAAAAFDALKSALTSSPV 971
Query: 1900 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 1721
L LPDF K FV+ETDAS +G+GAVLMQ+ PI Y+S+ L P +QALS+ ++E +AV+ A+
Sbjct: 972 LALPDFGKDFVIETDASNSGIGAVLMQDNHPICYISRALGPRHQALSVYEKELMAVVHAV 1031
Query: 1720 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 1541
TP Q W+++L+G YEIQYK+G EN D
Sbjct: 1032 T-----------------------------TPFQHMWLSKLMGYTYEIQYKQGKENHAAD 1062
Query: 1540 TLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIV 1361
LSR + L+ + + +D +KVI+ +P ++P + +
Sbjct: 1063 ALSRVTGAQLLSITLSHAHEGLFDSIQLLWQSDPHLSKVISDIKSNPASHPAYSFVNEEL 1122
Query: 1360 RYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSC 1181
R KG+L +G+D ++ IL MH+S GGHSG + T R+K +FYW KM +V +++C
Sbjct: 1123 RRKGKLVVGNDAAVKLHILKWMHDSVSGGHSGRDATLQRIKALFYWSKMSLEVQNYIRNC 1182
Query: 1180 DTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHF 1001
C+ NK D A PGLLQPL VP W+ I+MDFIEGLP S GK+ ILVV+DR +K AHF
Sbjct: 1183 QICQKNKYDLAASPGLLQPLPVPNGVWECISMDFIEGLPPSAGKHCILVVIDRLSKNAHF 1242
Query: 1000 MALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAY 821
MALSHP++A VA+ +LD +++LHG+P I SDRD F S W+ELF++ GV L S+AY
Sbjct: 1243 MALSHPYTAIEVAQAYLDNVFKLHGMPKDITSDRDPTFLSEVWRELFRVHGVDLRFSTAY 1302
Query: 820 HPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGY 641
HPQ+DGQTE N LE YLRCM + P+ W +WL LAE+WYNT +H+++K T F+ +YG
Sbjct: 1303 HPQTDGQTEVTNKTLETYLRCMTADAPQTWSKWLPLAEWWYNTTFHSAIKCTPFEIVYGQ 1362
Query: 640 PPPLLSIGPYL--DSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEV 467
PPP+ PYL +SS + +R+ + +L+ +L++A NR+K YAD HRS++ F+V
Sbjct: 1363 PPPVHL--PYLPGESSSVVVDRSLQKREELIAMLKFHLLRAQNRMKQYADSHRSQREFQV 1420
Query: 466 GDQVFLKLQPFRQNSVSLR-KSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHV 290
GD V+LKLQP+RQ S+ + KLS R+YGP+ V +K+G VAY+L+L +G+ IH VFHV
Sbjct: 1421 GDFVYLKLQPYRQQSLKTKGVPHKLSPRFYGPFRVTDKVGTVAYKLELPQGTAIHNVFHV 1480
Query: 289 PLLK 278
LK
Sbjct: 1481 SQLK 1484
Score = 390 bits (1003), Expect(3) = 0.0
Identities = 214/471 (45%), Positives = 290/471 (61%), Gaps = 20/471 (4%)
Frame = -2
Query: 3435 EEDIVETQSCIMEEVQMS*NALVGEDGVTTMRLYGESSDHILHILIDSGSTLSFIQESTT 3256
EED V + E+ +S NAL G MRL G+ H LHI +D GST +FI
Sbjct: 445 EEDAVVNPN--EEQPTISANALNGSTTFNCMRLMGQYGKHKLHIFVDPGSTHNFIDIKVA 502
Query: 3255 KKLGCELKSIKLLLVKVANGQKMVSSHVVDGFQWKMQGHTFTYPLRLLQNEGCDMILGGD 3076
K++ C+L+ + + V A G K V+ F W+MQG++FT +R L + D++LG
Sbjct: 503 KEINCKLEGTRPMTVDAALGGKTVTLFRSKDFTWRMQGYSFTTEVRTLPLDHWDIVLGVQ 562
Query: 3075 WLKSCTPIELD--YDKMTFTVNLLGRRVKIQELTSLAECKFISGPSLYKLMHMSCPTEIE 2902
WL + PI D Y +M FT+N G + ++ T+ A CK I G L K++
Sbjct: 563 WLATLGPILWDFTYLRMEFTLN--GAKYILRG-TAKAGCKVIKGNKLNKILSQEPQVAFL 619
Query: 2901 EMY-------------WVTVDGPSFEDNPDMQILLTKFQDVIAEPKGLPPSR-GVEHQIL 2764
++Y + VD + + +Q LL ++D+ EP GLPP R G +HQI
Sbjct: 620 QLYDPESATSVGASLSHIAVDESTSLSDATLQALLEAYEDLFIEPTGLPPFRKGFDHQIP 679
Query: 2763 IKQGSEPKHQFPYRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLC 2584
++ G+ P PYR + K+ I+R+++EML IIQNS SP+ASPV+LVKKKD +WRLC
Sbjct: 680 VEAGASPVSLRPYRYNSIQKDIIDRMVREMLSQGIIQNSSSPYASPVVLVKKKDGSWRLC 739
Query: 2583 VDYRYLNGLTIKYDYPIPVI----DELFGAKFFSKIDLRSGYFQILMKPEHRFLTTFSTH 2416
VDYR +N TIK YPIP++ DEL G+ +FSK+DLR+G+ QI M P + T F TH
Sbjct: 740 VDYRGVNKQTIKDKYPIPLLEDLLDELGGSTYFSKLDLRAGFHQIRMHPHDVYKTAFKTH 799
Query: 2415 NGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQV 2236
GHYE+LVMPFGL N P TFQ LMNQ+FR RK+VLVFFDDIL+YS +WE+HL HL++V
Sbjct: 800 AGHYEYLVMPFGLTNVPCTFQGLMNQVFRHIARKYVLVFFDDILVYSPTWEQHLQHLEEV 859
Query: 2235 FLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTP 2083
F LR +QL++K SKC FG +EY+GH IS GV+ DP KI ++ QWPTP
Sbjct: 860 FAVLRKHQLFLKPSKCTFGATVVEYLGHFISAAGVSTDPSKIKAVEQWPTP 910
Score = 43.1 bits (100), Expect(3) = 0.0
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -3
Query: 206 EPFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSFNP 57
EP +L+ ++V R+ V +VL+QW KATWE K K P+F+P
Sbjct: 1508 EPEAILEKKMVNRQNQAVTKVLVQWKGEPPSKATWEFYKDFITKHPTFHP 1557
>ref|XP_013658015.1| PREDICTED: uncharacterized protein LOC106362703 [Brassica napus]
Length = 1829
Score = 587 bits (1514), Expect(2) = 0.0
Identities = 288/616 (46%), Positives = 423/616 (68%), Gaps = 3/616 (0%)
Frame = -1
Query: 2074 KQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPVLT 1895
KQ+R FLGL YYR+FI+ Y ++++PLT+LL+KD + W + TAF LK+A+ +APVL
Sbjct: 833 KQVRSFLGLANYYRRFIQGYSIIARPLTILLRKDGYTWGSDESTAFKLLKEALTSAPVLA 892
Query: 1894 LPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAIQK 1715
LPDF+K F++ETDAS TG+GAVLMQ+ PI Y+S+ L +Q LS+ ++E LAV+ A+Q
Sbjct: 893 LPDFSKTFIVETDASNTGIGAVLMQDNHPICYISRALEKRHQGLSVYEKELLAVVHAVQT 952
Query: 1714 WKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVDTL 1535
W YL +KF+I+TDQ++LK+LL+Q+I TP Q W+++L+G +EIQYK+G EN D L
Sbjct: 953 WSPYLAHNKFIIRTDQKSLKFLLEQKITTPFQNMWLSKLMGYTFEIQYKQGKENIAADAL 1012
Query: 1534 SRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIVRY 1355
SR + L+ I + E+ + + D K+I+ + P+++ + +R
Sbjct: 1013 SRVSGSQLLQLTLSQIHHGFYDELKHLWTTDPTLQKIISELQIKPSSHASYTFINDELRR 1072
Query: 1354 KGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSCDT 1175
+G+L +G+DP ++ I +H+SA GGHSG + T R+K +FYWPKM +V V++C T
Sbjct: 1073 RGKLVVGNDPSVKLHIFKWLHDSAIGGHSGRDSTLHRIKSLFYWPKMTLEVQNYVRNCST 1132
Query: 1174 CKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHFMA 995
C+ NK D A PG+LQPL VP W+ I++DFIEGLP S GK+ ILVV+DR +K AHF+A
Sbjct: 1133 CQRNKYDQAAKPGMLQPLPVPAGVWESISLDFIEGLPPSAGKHCILVVIDRLSKNAHFLA 1192
Query: 994 LSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAYHP 815
LSHP++A +VAK +L+ ++RLHG+P I SDRD F S W+E+F++ GV+L+ S+AYHP
Sbjct: 1193 LSHPYTAMDVAKAYLNQVFRLHGMPKDITSDRDPTFLSEVWREMFRVHGVNLNYSTAYHP 1252
Query: 814 QSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGYPP 635
Q+DGQTE N LE YLRCM + P W WL LAE+WYNT YH+++ +T F+ +YG PP
Sbjct: 1253 QTDGQTEVTNKTLETYLRCMTSDAPHTWSEWLPLAEWWYNTTYHSAIHSTPFEVIYGQPP 1312
Query: 634 PLLSIGPYL--DSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVGD 461
P+ PYL +S+ ++ + +R+ + +++ +L++A NR+K YAD RS + FE+G+
Sbjct: 1313 PVHL--PYLPGESTSPTVNNTLQRREELIDMMKFHLLRAQNRMKQYADSRRSVREFEIGN 1370
Query: 460 QVFLKLQPFRQNSVSLRK-SLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPL 284
V+LKLQP+RQ+S+ R KLS R+YGP+ V +++G +AY+L L G+ IH VFHV
Sbjct: 1371 YVYLKLQPYRQHSLKGRHLPHKLSPRFYGPFEVQDRVGPLAYKLRLPPGAAIHNVFHVSQ 1430
Query: 283 LKKRVSDGTQPSPELP 236
LK + T +P LP
Sbjct: 1431 LKLCPNPPT-TTPTLP 1445
Score = 357 bits (915), Expect(2) = 0.0
Identities = 201/442 (45%), Positives = 266/442 (60%), Gaps = 24/442 (5%)
Frame = -2
Query: 3387 MS*NALVGEDGVTTMRLYGESSDHILHILIDSGSTLSFIQESTTKKLGCELKSIKLLLVK 3208
+S +AL G MRL G+ LHILID GST +F+ K LGC L K + V
Sbjct: 393 ISVHALNGCPTFNCMRLMGQYGKRKLHILIDPGSTHNFLNIQVAKGLGCSLIPTKPMSVV 452
Query: 3207 VANGQKMVSSHVVDGFQWKMQGHTFTYPLRLLQNEGCDMILGGDWLKSCTPIELDYDKMT 3028
A+G +++ + + F WKMQG+ F+ +R L D++LG WL + PI D+ +
Sbjct: 453 AASGD-LITKYKCNPFSWKMQGYGFSTEIRTLPLGCSDLVLGVQWLSTLGPILWDFLNLR 511
Query: 3027 FTVNLLGRRVKIQELTSLAECKFISGPSLYKLM------------HMSCPTEIEE----- 2899
N G + ++ + S K I+G SL KLM + E +
Sbjct: 512 MEFNFQGLKHVLRGV-SPNSAKVINGSSLNKLMLQEPQLALLHIRELDSTLETHQTLDPA 570
Query: 2898 --MYWVTVDGPSFEDNPDMQILLTKFQDVIAEPKGLPPSR-GVEHQILIKQGSEPKHQFP 2728
+Y + G + +DN +Q LL F D+ EP LPP R G H+I ++ G+ P P
Sbjct: 571 TLLYHIEASGANTDDNEPLQQLLASFADIFEEPTSLPPYREGFNHKIPLEAGANPVSLRP 630
Query: 2727 YRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYLNGLTIK 2548
YR S K+ I+++I+EM++ IIQ S SP+ASPV+LVKKKD +WRLCV YR LN TIK
Sbjct: 631 YRYSAVQKDAIDKMIREMVDQGIIQYSSSPYASPVVLVKKKDGSWRLCVYYRGLNKQTIK 690
Query: 2547 YDYPIPVI----DELFGAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFLVMPFG 2380
YPIP++ DEL G+K+FSK+DLR+G+ Q+ M PE T F TH+GHYE+LVMPFG
Sbjct: 691 DKYPIPLLEDLLDELGGSKYFSKLDLRAGFHQLRMSPEDVHKTAFKTHSGHYEYLVMPFG 750
Query: 2379 LCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNNQLYVK 2200
L NAP TFQ LMN +F LRKF+LVFFDDILIYSK+WE+HL HL VF LR+ QLY+K
Sbjct: 751 LTNAPCTFQGLMNHVFEPILRKFLLVFFDDILIYSKTWEDHLHHLDMVFSILRHQQLYLK 810
Query: 2199 RSKCNFGQLEIEYIGHIISHYG 2134
SKC FG IEY+GH IS+ G
Sbjct: 811 MSKCTFGATRIEYLGHFISNEG 832
>ref|XP_008779305.1| PREDICTED: transposon Ty3-G Gag-Pol polyprotein [Phoenix dactylifera]
Length = 1179
Score = 585 bits (1507), Expect(3) = 0.0
Identities = 299/615 (48%), Positives = 406/615 (66%)
Frame = -1
Query: 2080 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 1901
T K++RGFLGL GYYRKFIRN+G ++ P+T LL K+KF W+ EAETAF LK A+ T P
Sbjct: 511 TAKEVRGFLGLAGYYRKFIRNFGTMAAPMTKLLTKEKFHWSEEAETAFNQLKQALTTPPT 570
Query: 1900 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 1721
L LPDF++ FV+E DASG G+GAVL Q +PIAY S+ L LS ++E LA++ AI
Sbjct: 571 LCLPDFSQTFVVECDASGAGIGAVLTQHNKPIAYFSEALKGTALTLSTYEKEMLAIVNAI 630
Query: 1720 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 1541
+KW+ YL G F ++TD ++LKYLL+QRI TP Q +W+ +LLG DY I+YKKG EN+ D
Sbjct: 631 RKWQPYLLGKPFTVRTDHKSLKYLLEQRITTPAQTRWLPKLLGYDYTIEYKKGPENQAAD 690
Query: 1540 TLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIV 1361
+LSR + E +++ W ++ D F+A + + N I+R G+
Sbjct: 691 SLSR--IGEVQFLSISVPHADWWPKLQMEVQQDPFYASLASKNASHK-----LILRDGVW 743
Query: 1360 RYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSC 1181
GR+ + L +ILA H+S GGH G + T R++ F WPKM+ V + +++C
Sbjct: 744 FQHGRVFLSPTSTLIPLILADSHSSPIGGHFGTHKTLYRIRQSFIWPKMRQTVKKFLRTC 803
Query: 1180 DTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHF 1001
+ C+ K D GLLQPL +PT+ W ++MDFIEGLP + G +VI+VVVDR +KYAHF
Sbjct: 804 EVCQQCKSDCMQPAGLLQPLPIPTRIWTDVSMDFIEGLPTANGHSVIMVVVDRLSKYAHF 863
Query: 1000 MALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAY 821
+ L H F A+ V K F+ + RLHG+P SIVSDRDK+FTS+FW+ LF+L +L MSS+Y
Sbjct: 864 VPLKHLFIAAMVTKAFVANVVRLHGIPTSIVSDRDKVFTSSFWQNLFRLQETNLCMSSSY 923
Query: 820 HPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGY 641
HPQ+DGQTE +N LE YLRC V + PK W WL AEF YNT+ H+S K T F+A+YG
Sbjct: 924 HPQTDGQTEVVNRILEQYLRCFVGQQPKKWVEWLPWAEFSYNTSTHSSTKITPFEAVYGT 983
Query: 640 PPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVGD 461
PPP L + + + + R ++ LR NL A R+ ++A++HR E SFEVGD
Sbjct: 984 PPPNLLTYVPGTARVQAVEEYLQDRDTLLRDLRRNLCLAQERMTSHANQHRREVSFEVGD 1043
Query: 460 QVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPLL 281
V+LKLQP+RQ +V+ R SLKLS R+YGP+ V+E++G VAY+LDL EG +IH VFHV LL
Sbjct: 1044 YVYLKLQPYRQTTVAFRGSLKLSPRFYGPFQVVERVGPVAYKLDLPEGCQIHNVFHVSLL 1103
Query: 280 KKRVSDGTQPSPELP 236
+K + T S LP
Sbjct: 1104 RKHLGSITPASSHLP 1118
Score = 329 bits (844), Expect(3) = 0.0
Identities = 186/468 (39%), Positives = 270/468 (57%), Gaps = 9/468 (1%)
Frame = -2
Query: 3459 YLLQTFPVEED--IVETQS-CIMEEV--QMS*NALVGEDGVTTMRLYGESSDHILHILID 3295
++++ P EED ETQ + EV ++S +A+ G + T+R+ G+ + L +LID
Sbjct: 68 FMIEDSPYEEDENSEETQQGAELAEVTPEISFHAIAGAEHPQTIRVLGKLKNKNLMVLID 127
Query: 3294 SGSTLSFIQESTTKKLGCELKSIKLLLVKVANGQKMVSSHVVDGFQWKMQGHTFTYPLRL 3115
GST +FI ++ + G + K L V VAN ++M + G +QG T +
Sbjct: 128 GGSTHNFIDQTIATRFGLPIIRDKKLQVVVANRERMECAGQCRGIMLAIQGIPITADYYV 187
Query: 3114 LQNEGCDMILGGDWLKSCTPIELDYDKMTFTVNLLGRRVKIQELTSLAECKFISGPSLYK 2935
L C ++LG WL++ P++ DY +T T + G + +Q L +AE I + +
Sbjct: 188 LPVAACQVVLGVQWLETLGPVKTDYKHLTMTFKIGGVKHTLQGLGRMAEASSIEALNNKE 247
Query: 2934 LMHMSCPTEIEEMYWVTVDGPSFEDNPDMQILLTKFQDVIAEPKGLPPSRGVEHQILIKQ 2755
+ ++ V++ P+ P+++ LL +F + A P +PP R +H+I ++
Sbjct: 248 HSGLQGMGFFFQIQQVSLTPPTPPYPPEIKRLLDQFAGIFASPTSIPPKRQQDHRIPLQT 307
Query: 2754 GSEPKHQFPYRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDY 2575
+ P PYR + K EIER+ D TWR C+DY
Sbjct: 308 NAGPVSVRPYRYPYYQKTEIERMA--------------------------DGTWRFCIDY 341
Query: 2574 RYLNGLTIKYDYPIPVIDELF----GAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGH 2407
R LN +TIK YPIPVIDEL GAKF+SK+DLRSGY QI ++ + T F TH GH
Sbjct: 342 RALNNITIKDKYPIPVIDELLDELHGAKFYSKLDLRSGYHQIRVQEDDIPKTAFRTHEGH 401
Query: 2406 YEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLT 2227
YEF+VMPFGL NAPATFQSLMN +FR YLR+F+LVFFDDIL+YSKSWE+HL HL V
Sbjct: 402 YEFVVMPFGLTNAPATFQSLMNDLFRPYLRQFILVFFDDILVYSKSWEDHLTHLHLVLTI 461
Query: 2226 LRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTP 2083
L ++QL+ K SKC+FG +++Y+GHII+ GV++DP K+ ++V WPTP
Sbjct: 462 LSSHQLFAKESKCHFGVQQVKYLGHIITEDGVSVDPDKVQAVVAWPTP 509
Score = 36.6 bits (83), Expect(3) = 0.0
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 206 EPFRVLDHR-IVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSFNP 57
+P +L R I K K +VL++W D ATWE++ K +P+F P
Sbjct: 1129 QPESILARREIQKGKYRPKSEVLVKWVGASADDATWENEWRFFKSYPNFRP 1179
>gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 541 bits (1393), Expect(2) = 0.0
Identities = 272/501 (54%), Positives = 351/501 (70%), Gaps = 1/501 (0%)
Frame = -1
Query: 2080 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 1901
T K+LRGFLGL GYYR+F++++G +SK L +L K+ F WT+E AF LK A+ APV
Sbjct: 455 TAKELRGFLGLAGYYRRFVKDFGKISKSLHEMLGKEGFKWTNERHYAFQQLKKAVSAAPV 514
Query: 1900 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 1721
L LPDFT F +ETDASG GVGAVL+Q+GRPIA+MSK L P N+ LS +RE LA+++A+
Sbjct: 515 LALPDFTIDFTIETDASGIGVGAVLLQKGRPIAFMSKPLSPRNRQLSTYEREMLAIVIAV 574
Query: 1720 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 1541
QKW+ YL G F IKTD Q+LKYL++QR+ TP QQKW+ +L+G DYE+ YKKG EN V D
Sbjct: 575 QKWRPYLIGRHFKIKTDHQSLKYLMEQRVSTPSQQKWVAKLMGYDYELIYKKGQENVVAD 634
Query: 1540 TLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIV 1361
LSR A++ I L ++ S+ D K+I D ++P + +
Sbjct: 635 ALSR----SPTLLAVSAIHTDLLDQIKWSWNVDDKLKKIIQQKQSDINSWPRYTWVQDQL 690
Query: 1360 RYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSC 1181
R KG+L +GSDP L+ ++ H S+ GGHSG+ T +LKG FYW ++ DV Q V+ C
Sbjct: 691 RRKGKLVVGSDPGLKLQLIHNFHASSIGGHSGMEATTRKLKGQFYWKGLRRDVEQFVREC 750
Query: 1180 DTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHF 1001
C+ NK + A GLLQPL +P W I+MDFIEGLP S GK VI+VVVDR +KYAHF
Sbjct: 751 SVCQQNKYETTAPAGLLQPLPIPEGIWTEISMDFIEGLPNSQGKEVIMVVVDRLSKYAHF 810
Query: 1000 MALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAY 821
+ALSHP++AS+VA+LFLD IY+LHG+P SIVSDRD IF S FW+ELFK + V +++S+AY
Sbjct: 811 IALSHPYTASSVAQLFLDNIYKLHGMPRSIVSDRDTIFVSQFWQELFKRLQVKVNLSTAY 870
Query: 820 HPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGY 641
HPQSDGQTE +N CLENYLRCM E PK W +WL LAE+WYNT+YH+S K T ++ +YG
Sbjct: 871 HPQSDGQTEVVNRCLENYLRCMAGERPKEWAKWLPLAEWWYNTSYHSSTKATPYEVVYGQ 930
Query: 640 PPPLLSIGPYL-DSSINEAHD 581
PPPL PYL S+ EA D
Sbjct: 931 PPPLHV--PYLAGDSLMEAVD 949
Score = 385 bits (990), Expect(2) = 0.0
Identities = 205/444 (46%), Positives = 279/444 (62%), Gaps = 22/444 (4%)
Frame = -2
Query: 3348 TMRLYGESSDHILHILIDSGSTLSFIQESTTKKLGCELKSIKLLLVKVANGQKMVSSHVV 3169
TMRL G + +HILIDSGST +F+ + KLGC ++I + V VA+G K++SS
Sbjct: 11 TMRLCGTVKNRRIHILIDSGSTHNFLDAAVAAKLGCCAENIPAVNVTVADGNKLISSSTC 70
Query: 3168 DGFQWKMQGHTFTYPLRLLQNEGCDMILGGDWLKSCTPIELDYDKMTFTVNLLGRRVKIQ 2989
F+WKMQG F L LL GCDM+LG WLK PI D+ K+ G+++ ++
Sbjct: 71 RAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDFSKLRMEFQFQGQKIVLR 130
Query: 2988 ELTSLAECKFISGPSLYKLM---------HM----SCPTE-----IEEMYWVTVDGPSFE 2863
+S K I G L K++ H+ + P E E T G
Sbjct: 131 G-SSGPSLKIIEGKQLKKMVLDDTALSAVHLCSIHATPQEGNHIATSEDAETTWSGLGKA 189
Query: 2862 DNPDMQILLTKFQDVIAEPKGLPPSRGVEHQILIKQGSEPKHQFPYRTSHA*KNEIERII 2683
+ +Q+LL + D+ EP+GLPP R +H+I +K+G+ P + PYR K EIE+++
Sbjct: 190 YSQQLQLLLEEHSDLFEEPQGLPPVRLHDHKIPLKEGTNPINVRPYRYPAYQKTEIEKLV 249
Query: 2682 KEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYLNGLTIKYDYPIPVIDELF--- 2512
+EML +I S SP++SPV+LVKKKD +WRLC+DYR LN TIK +PIP++DEL
Sbjct: 250 QEMLSQGVITPSNSPYSSPVVLVKKKDGSWRLCIDYRSLNDSTIKDKFPIPLVDELLDEL 309
Query: 2511 -GAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFLVMPFGLCNAPATFQSLMNQI 2335
GAK FS++DLRSGY QI M + T F TH GHYEFLVMPFGL NAP+TFQ LMN I
Sbjct: 310 SGAKLFSELDLRSGYHQIRMHADDISKTAFRTHEGHYEFLVMPFGLTNAPSTFQGLMNHI 369
Query: 2334 FREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNNQLYVKRSKCNFGQLEIEYIG 2155
F+ YLR+F+LVFFDDIL+YSK EEHL HL+ F LR + L+V+R KC F +++EY+G
Sbjct: 370 FKPYLRRFILVFFDDILVYSKGVEEHLCHLRTTFQVLRQHSLFVRRKKCIFAAVQLEYLG 429
Query: 2154 HIISHYGVAIDPQKISSMVQWPTP 2083
H+ISH GV++D +K+ ++ +WP P
Sbjct: 430 HVISHEGVSMDKKKVEAIQEWPLP 453
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 590 bits (1520), Expect(2) = 0.0
Identities = 298/627 (47%), Positives = 409/627 (65%), Gaps = 5/627 (0%)
Frame = -1
Query: 2083 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 1904
K + LR FLG+TGYYR+FI+ Y ++ +PL +LKK+ F W + AF LK M ++P
Sbjct: 867 KNVTDLRKFLGMTGYYRRFIQGYVLICRPLHDMLKKEGFQWGEKQTEAFKFLKQKMCSSP 926
Query: 1903 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 1724
VLTLPDF+K F +E DA GTG+GAVLMQ RPIA+ SK+L P A SI ++E +A+L A
Sbjct: 927 VLTLPDFSKEFTIEADACGTGIGAVLMQGDRPIAFYSKSLGPKAAAQSIYEKEAMAILEA 986
Query: 1723 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 1544
++KW+HY G K +IKTDQQ+LK++++QR++ +Q K + +L+ DY I+YK G +N V
Sbjct: 987 LKKWRHYFLGSKLVIKTDQQSLKHMMNQRLVEGIQHKLLLKLMEYDYIIEYKAGKDNVVA 1046
Query: 1543 DTLSRR---DVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIA--ANTLDPTTYPDFI 1379
D LSR ++ + CNA+T + P W+ +V NSY D K+++ DP + F
Sbjct: 1047 DALSRLPQDQLQTEICNAITVVIPKWIIDVQNSYEGDVQAHKILSMIGTNSDPDQHYSF- 1105
Query: 1378 VRGGIVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVI 1199
GI+R+KGR+ +G + +R+ ++ H SA+GGHSG+ T+ R+K +FYWP +K V
Sbjct: 1106 -ENGILRFKGRIYVGEETSIRTNLIRDYHCSAFGGHSGMRATHHRIKALFYWPGLKKTVE 1164
Query: 1198 QLVKSCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRF 1019
++ C C++ K ++ PGLL PL V AW HITMDFIEGLPKS K+ ILVVVDR
Sbjct: 1165 MFIRECPVCQITKVEHIHIPGLLNPLEVLDMAWTHITMDFIEGLPKSKWKDAILVVVDRL 1224
Query: 1018 TKYAHFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSL 839
TKYAHF+ALSHP+S V ++F++ I+RLHG+P++I+ DRD+IFTS ++E+FK M V L
Sbjct: 1225 TKYAHFLALSHPYSVEQVVEIFMNNIHRLHGMPMAIIIDRDRIFTSQLFQEIFKSMKVQL 1284
Query: 838 DMSSAYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHF 659
S++YHPQ+DGQTER+N CLE+YLR M + P W+ WLSLA +WYNT YHTSL+ T F
Sbjct: 1285 RFSTSYHPQTDGQTERVNQCLESYLRNMTFQEPHQWYSWLSLAGWWYNTTYHTSLQMTPF 1344
Query: 658 QALYGYPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEK 479
QALYGYPPP INE + A R+E+
Sbjct: 1345 QALYGYPPP----------QINEFSISCNVSAEA----------------------RTER 1372
Query: 478 SFEVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPV 299
S VGD V++KLQP+RQ + +R SLKL +++YGP+ VLEKIG VAY+L L E + IHPV
Sbjct: 1373 SLNVGDMVYIKLQPYRQTAFGIRGSLKLRSKFYGPFKVLEKIGQVAYKLQLPEDASIHPV 1432
Query: 298 FHVPLLKKRVSDGTQPSPELPLADSEG 218
FHV LKK + P LP +G
Sbjct: 1433 FHVSQLKKHLGQRAVPMSNLPSMGPDG 1459
Score = 335 bits (860), Expect(2) = 0.0
Identities = 188/465 (40%), Positives = 265/465 (56%), Gaps = 13/465 (2%)
Frame = -2
Query: 3435 EEDIVETQSCIMEEVQ------MS*NALVGEDGVTTMRLYGESSDHILHILIDSGSTLSF 3274
+E ++E EE+ +S NA+ G T + + + L+DSGS +F
Sbjct: 403 QEKVLEETEHAPEEIDQEELMYVSQNAMQGATRPDTFSVIIQINGRRAVGLVDSGSPSTF 462
Query: 3273 IQESTTKKLGCELKSIKLLLVKVANGQKMVSSHVVDGFQWKMQGHTFTYPLRLLQNEGCD 3094
+ + + C L S V VA G ++ S V +++QG TF+ L+ +G D
Sbjct: 463 MDQEYAIRNDCPLVSTDSKKVVVAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYD 522
Query: 3093 MILGGDWLKSCTPIELDYDKMTFTVNLLGRRVKIQELTSLAECKFISGPSLYKLMHMSCP 2914
+ILG DW+ +PI LD K + + + +Q+ T+ + + + K++
Sbjct: 523 IILGADWIYKYSPITLDLKKRELGITKGEKVITLQDFTNTGKHLLVDSSKVDKIIRKGGL 582
Query: 2913 TEIEEMYWVTVDGP---SFEDNPDMQILLTKFQDVIAEPKGLPPSRGVEHQILIKQGSEP 2743
+ ++ V + S D+Q +L +F V+ +PKGLPP RG +H I +K G+ P
Sbjct: 583 GYLFQITQVAEESDVEESISIPDDIQDILQRFPTVLEKPKGLPPQRGCDHVITLKDGAIP 642
Query: 2742 KHQFPYRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYLN 2563
+ PYR H K +E+II E++E+ IQ S SP++SP ++V+KKD +WRLCVDYR LN
Sbjct: 643 PNLRPYRVPHHQKEAMEKIIAELIESKEIQVSNSPYSSPAVMVRKKDGSWRLCVDYRQLN 702
Query: 2562 GLTIKYDYPIPVI----DELFGAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFL 2395
T+K +P+P+I DEL GAK F+K+DL SGY QI M T F TH GHYE+
Sbjct: 703 AQTVKNKFPMPIIEDLLDELNGAKIFTKLDLMSGYHQIRMSRPDIPKTAFRTHLGHYEYQ 762
Query: 2394 VMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNN 2215
VMPFGL NAPATFQSLMNQ+ + RKFVLVFFDDILIYSK EEH H++ V L+ N
Sbjct: 763 VMPFGLTNAPATFQSLMNQVLAPFFRKFVLVFFDDILIYSKDREEHKEHIRLVLQVLKAN 822
Query: 2214 QLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPK 2080
L +K KC FG + Y+GHIIS GVA DP K+ +V WP PK
Sbjct: 823 NLVIKPKKCAFGLSSVSYLGHIISQNGVATDPGKVEKIVSWPIPK 867
>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 590 bits (1520), Expect(2) = 0.0
Identities = 298/627 (47%), Positives = 409/627 (65%), Gaps = 5/627 (0%)
Frame = -1
Query: 2083 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 1904
K + LR FLG+TGYYR+FI+ Y ++ +PL +LKK+ F W + AF LK M ++P
Sbjct: 765 KNVTDLRKFLGMTGYYRRFIQGYVLICRPLHDMLKKEGFQWGEKQTEAFKFLKQKMCSSP 824
Query: 1903 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 1724
VLTLPDF+K F +E DA GTG+GAVLMQ RPIA+ SK+L P A SI ++E +A+L A
Sbjct: 825 VLTLPDFSKEFTIEADACGTGIGAVLMQGDRPIAFYSKSLGPKAAAQSIYEKEAMAILEA 884
Query: 1723 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 1544
++KW+HY G K +IKTDQQ+LK++++QR++ +Q K + +L+ DY I+YK G +N V
Sbjct: 885 LKKWRHYFLGSKLVIKTDQQSLKHMMNQRLVEGIQHKLLLKLMEYDYIIEYKAGKDNVVA 944
Query: 1543 DTLSRR---DVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIA--ANTLDPTTYPDFI 1379
D LSR ++ + CNA+T + P W+ +V NSY D K+++ DP + F
Sbjct: 945 DALSRLPQDQLQTEICNAITVVIPKWIIDVQNSYEGDVQAHKILSMIGTNSDPDQHYSF- 1003
Query: 1378 VRGGIVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVI 1199
GI+R+KGR+ +G + +R+ ++ H SA+GGHSG+ T+ R+K +FYWP +K V
Sbjct: 1004 -ENGILRFKGRIYVGEETSIRTNLIRDYHCSAFGGHSGMRATHHRIKALFYWPGLKKTVE 1062
Query: 1198 QLVKSCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRF 1019
++ C C++ K ++ PGLL PL V AW HITMDFIEGLPKS K+ ILVVVDR
Sbjct: 1063 MFIRECPVCQITKVEHIHIPGLLNPLEVLDMAWTHITMDFIEGLPKSKWKDAILVVVDRL 1122
Query: 1018 TKYAHFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSL 839
TKYAHF+ALSHP+S V ++F++ I+RLHG+P++I+ DRD+IFTS ++E+FK M V L
Sbjct: 1123 TKYAHFLALSHPYSVEQVVEIFMNNIHRLHGMPMAIIIDRDRIFTSQLFQEIFKSMKVQL 1182
Query: 838 DMSSAYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHF 659
S++YHPQ+DGQTER+N CLE+YLR M + P W+ WLSLA +WYNT YHTSL+ T F
Sbjct: 1183 RFSTSYHPQTDGQTERVNQCLESYLRNMTFQEPHQWYSWLSLAGWWYNTTYHTSLQMTPF 1242
Query: 658 QALYGYPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEK 479
QALYGYPPP INE + A R+E+
Sbjct: 1243 QALYGYPPP----------QINEFSISCNVSAEA----------------------RTER 1270
Query: 478 SFEVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPV 299
S VGD V++KLQP+RQ + +R SLKL +++YGP+ VLEKIG VAY+L L E + IHPV
Sbjct: 1271 SLNVGDMVYIKLQPYRQTAFGIRGSLKLRSKFYGPFKVLEKIGQVAYKLQLPEDASIHPV 1330
Query: 298 FHVPLLKKRVSDGTQPSPELPLADSEG 218
FHV LKK + P LP +G
Sbjct: 1331 FHVSQLKKHLGQRAVPMSNLPSMGPDG 1357
Score = 335 bits (860), Expect(2) = 0.0
Identities = 188/465 (40%), Positives = 265/465 (56%), Gaps = 13/465 (2%)
Frame = -2
Query: 3435 EEDIVETQSCIMEEVQ------MS*NALVGEDGVTTMRLYGESSDHILHILIDSGSTLSF 3274
+E ++E EE+ +S NA+ G T + + + L+DSGS +F
Sbjct: 301 QEKVLEETEHAPEEIDQEELMYVSQNAMQGATRPDTFSVIIQINGRRAVGLVDSGSPSTF 360
Query: 3273 IQESTTKKLGCELKSIKLLLVKVANGQKMVSSHVVDGFQWKMQGHTFTYPLRLLQNEGCD 3094
+ + + C L S V VA G ++ S V +++QG TF+ L+ +G D
Sbjct: 361 MDQEYAIRNDCPLVSTDSKKVVVAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYD 420
Query: 3093 MILGGDWLKSCTPIELDYDKMTFTVNLLGRRVKIQELTSLAECKFISGPSLYKLMHMSCP 2914
+ILG DW+ +PI LD K + + + +Q+ T+ + + + K++
Sbjct: 421 IILGADWIYKYSPITLDLKKRELGITKGEKVITLQDFTNTGKHLLVDSSKVDKIIRKGGL 480
Query: 2913 TEIEEMYWVTVDGP---SFEDNPDMQILLTKFQDVIAEPKGLPPSRGVEHQILIKQGSEP 2743
+ ++ V + S D+Q +L +F V+ +PKGLPP RG +H I +K G+ P
Sbjct: 481 GYLFQITQVAEESDVEESISIPDDIQDILQRFPTVLEKPKGLPPQRGCDHVITLKDGAIP 540
Query: 2742 KHQFPYRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYLN 2563
+ PYR H K +E+II E++E+ IQ S SP++SP ++V+KKD +WRLCVDYR LN
Sbjct: 541 PNLRPYRVPHHQKEAMEKIIAELIESKEIQVSNSPYSSPAVMVRKKDGSWRLCVDYRQLN 600
Query: 2562 GLTIKYDYPIPVI----DELFGAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFL 2395
T+K +P+P+I DEL GAK F+K+DL SGY QI M T F TH GHYE+
Sbjct: 601 AQTVKNKFPMPIIEDLLDELNGAKIFTKLDLMSGYHQIRMSRPDIPKTAFRTHLGHYEYQ 660
Query: 2394 VMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNN 2215
VMPFGL NAPATFQSLMNQ+ + RKFVLVFFDDILIYSK EEH H++ V L+ N
Sbjct: 661 VMPFGLTNAPATFQSLMNQVLAPFFRKFVLVFFDDILIYSKDREEHKEHIRLVLQVLKAN 720
Query: 2214 QLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPK 2080
L +K KC FG + Y+GHIIS GVA DP K+ +V WP PK
Sbjct: 721 NLVIKPKKCAFGLSSVSYLGHIISQNGVATDPGKVEKIVSWPIPK 765
>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 937
Score = 607 bits (1565), Expect(3) = 0.0
Identities = 307/615 (49%), Positives = 408/615 (66%)
Frame = -1
Query: 2080 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 1901
++ +LRGFLGLTGYYRKF++ Y ++++PLTLLLKK FLWT A+ AF LK AM P+
Sbjct: 241 SVTELRGFLGLTGYYRKFVQGYSIIARPLTLLLKKKAFLWTDAAQLAFDQLKTAMSNTPM 300
Query: 1900 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 1721
L LP+F PF LETDA G+GAVL Q+G PIAY SK L P+NQ LSI ++EFLA++MA+
Sbjct: 301 LALPNFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLGPVNQKLSIYEKEFLAIMMAV 360
Query: 1720 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 1541
KW+ YL F+IKT + L +L DQ + T +QQK +T+L+GL Y QYK+G N V D
Sbjct: 361 DKWRCYLQRGPFIIKTYHKILCHLDDQILGTELQQKAMTKLMGLQYSFQYKRGVNNIVAD 420
Query: 1540 TLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIV 1361
LSR C A + + P W+QE+INSY D +++A + + + GI+
Sbjct: 421 ALSRMPSSSQFC-AFSVVQPIWIQEMINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGII 479
Query: 1360 RYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSC 1181
R++ ++ IGS+ L + ++ A H SA GGHSG+ TY R+K +F WP +K DV VK C
Sbjct: 480 RFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHRIKKLFAWPGLKLDVENFVKQC 539
Query: 1180 DTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHF 1001
C+ K ++ PGLL PL +P +AW+ I+MDFIEGLP+S G N ILVVVDRFTKYA+F
Sbjct: 540 QVCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVVDRFTKYANF 599
Query: 1000 MALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAY 821
+ L HPF+AS VA L T+++ HG+P SIVSDRD++FTS FW LF L MS+AY
Sbjct: 600 IPLRHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFTSKFWTTLFATWDTQLQMSTAY 659
Query: 820 HPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGY 641
HPQ+DGQ ER+N CLE YLRCM NPK W W+ LAEFWYNTNYHT L + +AL+G
Sbjct: 660 HPQTDGQIERVNQCLEMYLRCMTQANPKKWSHWIHLAEFWYNTNYHTYLGCSPHKALFGV 719
Query: 640 PPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVGD 461
P + +++ + D+ ++RQ + L+ L +A R+K DK RS++ F VGD
Sbjct: 720 DPHYSQVPDLTLATLPDVVDVQTERQHLSEFLQQQLTRAQLRMKNKVDKGRSDRVFAVGD 779
Query: 460 QVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPLL 281
VFLKLQP+ Q+SV R KL+ +++GP+ VLE+IG AYRLDL S +HPVFHV L
Sbjct: 780 AVFLKLQPYAQSSVVNRPYPKLAYKFFGPFTVLERIGVAAYRLDLPASSTVHPVFHVSQL 839
Query: 280 KKRVSDGTQPSPELP 236
K +V D T LP
Sbjct: 840 KAQVPDHTPVYTSLP 854
Score = 262 bits (670), Expect(3) = 0.0
Identities = 125/220 (56%), Positives = 162/220 (73%), Gaps = 4/220 (1%)
Frame = -2
Query: 2730 PYRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYLNGLTI 2551
PYR S K+EIE+ +KEM++A +I S SP+ASPV+LVKKKD +WR CVDYR LN LTI
Sbjct: 20 PYRYSPLQKDEIEKQVKEMIDAGLITPSMSPYASPVLLVKKKDGSWRFCVDYRRLNALTI 79
Query: 2550 KYDYPIPVIDELF----GAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFLVMPF 2383
K +P+PV+DEL G KFFSK+DL++GY QI M T F TH+G ++F VMPF
Sbjct: 80 KSKFPMPVVDELLDELSGTKFFSKLDLKAGYHQIRMVETDEAKTAFKTHHGQFQFRVMPF 139
Query: 2382 GLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNNQLYV 2203
GL NAP+TFQ LMN + ++RKFVLVF DDIL+YS + HL HLQQVF+ LR +QL+
Sbjct: 140 GLTNAPSTFQCLMNSVLAPFIRKFVLVFMDDILVYSPDLDSHLHHLQQVFVILRQHQLFA 199
Query: 2202 KRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTP 2083
+RSKC+F ++EY+GHIIS GV+ DP+K ++M+ WP P
Sbjct: 200 RRSKCSFACTQLEYLGHIISDKGVSTDPEKTAAMLAWPVP 239
Score = 58.5 bits (140), Expect(3) = 0.0
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = -3
Query: 209 IEPFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSFNPWGQGLSPPR 30
+ P +L+ R+VKR QVL++W++L D ATWED ++ +FP WGQ +P
Sbjct: 864 VVPEAILERRLVKRSNAAHVQVLLKWSSLPADHATWEDYHVVKTRFPDAPAWGQAETPAG 923
Query: 29 GIVM 18
G VM
Sbjct: 924 GTVM 927
>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
Length = 1593
Score = 607 bits (1566), Expect(3) = 0.0
Identities = 313/625 (50%), Positives = 408/625 (65%)
Frame = -1
Query: 2080 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 1901
T+ +LR FLGLTGYYRKF+ NYG++++ LT LLKK KF A+ AF LK AM T P
Sbjct: 659 TVTELRAFLGLTGYYRKFVHNYGIIARALTNLLKKGKFQXDEAAKKAFENLKAAMTTTPT 718
Query: 1900 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 1721
L LPDF+ PFV++TDASG G+GAVL Q GRPIA+MS+ L Q+LS RE LA+++AI
Sbjct: 719 LALPDFSSPFVIQTDASGDGIGAVLSQNGRPIAFMSRALGVSKQSLSTYAREMLAIIVAI 778
Query: 1720 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 1541
Q W+ YL G +F I+TDQ++LKYLL+QRI+TP QQKW+++L+G DYEI YK G N+ D
Sbjct: 779 QTWRPYLLGRRFTIQTDQRSLKYLLEQRIITPEQQKWMSKLVGYDYEIVYKPGKTNQAAD 838
Query: 1540 TLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIV 1361
LSR C + + + + I AN + + + I P + R G+V
Sbjct: 839 ALSRNMTSP--CLNVFFVPQVQVWDEIRHEANSNPYMQRIGQLATKQPRQP-YQWRNGLV 895
Query: 1360 RYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSC 1181
Y R+ + L +L H++ GGHS + TY RL FYWP M+ V Q V +C
Sbjct: 896 CYNNRIVVPPGSPLIHCLLREFHDTPMGGHSRILRTYKRLSQQFYWPSMRRSVHQYVAAC 955
Query: 1180 DTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHF 1001
D C+ K + + GLLQPL +P Q W ITMDFI+GLP+S GK I+VVVDR +K AHF
Sbjct: 956 DVCQKAKAETMSPAGLLQPLPIPCQVWDDITMDFIDGLPRSDGKTSIMVVVDRLSKSAHF 1015
Query: 1000 MALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAY 821
+A++HP++A +A F++ + +LHG+P SI+SDRD +F SNFW+E KL G L M+SAY
Sbjct: 1016 IAIAHPYTAKTLANKFVEGVVKLHGMPRSIISDRDPVFISNFWQEFLKLSGTKLRMTSAY 1075
Query: 820 HPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGY 641
HPQSDGQTE +N C+E YLRC VH P+HW L AE+WYNT YH+S T FQALYG
Sbjct: 1076 HPQSDGQTEVVNRCIEQYLRCFVHHKPRHWNSLLPWAEYWYNTTYHSSTGMTPFQALYGR 1135
Query: 640 PPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVGD 461
PPP + I E D ++ R +Q L+ +L A+NR+K ADK R E +FEVGD
Sbjct: 1136 PPPAIPSYEIGSCPIEELDDQMTARNELLQELKAHLHAANNRMKQAADKKRREVNFEVGD 1195
Query: 460 QVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPLL 281
V+L+LQP+RQ SV R S KLS RYYGPY + E+IG VAY+L L GS+IHPVFHV LL
Sbjct: 1196 WVYLRLQPYRQQSVFRRTSHKLSNRYYGPYEIEERIGPVAYKLKLSPGSRIHPVFHVSLL 1255
Query: 280 KKRVSDGTQPSPELPLADSEGNSRL 206
KK++ + + ELP EG RL
Sbjct: 1256 KKKIGEVAIANDELPPLTEEGVIRL 1280
Score = 274 bits (700), Expect(3) = 0.0
Identities = 133/274 (48%), Positives = 183/274 (66%), Gaps = 4/274 (1%)
Frame = -2
Query: 2892 WVTVDGPSFEDNPDMQILLTKFQDVIAEPKGLPPSRGVEHQILIKQGSEPKHQFPYRTSH 2713
+ T +G S +++ L+ F D+ P LPP R +EHQI +K+G++P + PYR ++
Sbjct: 398 YATEEGNSTPVQQELKELIEAFDDIFQAPSQLPPQRDIEHQITLKEGTDPINVRPYRYAY 457
Query: 2712 A*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYLNGLTIKYDYPI 2533
K+EIER + +ML + +I+ S SPF+SPV+L KKKD +WR C DYR LN TIK +PI
Sbjct: 458 FQKDEIERQVSDMLNSGLIRPSSSPFSSPVLLEKKKDGSWRFCTDYRALNAATIKDRFPI 517
Query: 2532 P----VIDELFGAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFLVMPFGLCNAP 2365
P ++DEL GA +F+K+DL +GY Q+ + P + T F THNGHYE+LVMPFGLCNAP
Sbjct: 518 PTVEDMLDELHGAAYFTKLDLTAGYHQVRLHPPDIYKTAFRTHNGHYEYLVMPFGLCNAP 577
Query: 2364 ATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNNQLYVKRSKCN 2185
+TFQ+LMN +FR +LRKFVL EHL H++ +F LR +QL+VK KC
Sbjct: 578 STFQALMNSVFRPFLRKFVL--------------EHLQHVKTIFKLLRQHQLFVKFKKCE 623
Query: 2184 FGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTP 2083
FG+ E+EY+ HIIS GV +D KI +M+ WP P
Sbjct: 624 FGKHELEYLSHIISADGVKVDQSKIQAMLDWPRP 657
Score = 40.8 bits (94), Expect(3) = 0.0
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -3
Query: 221 GQFKIEPFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSFN 60
G +++P +VL R V + + L+ W L ++ATWED + + + FP+ N
Sbjct: 1276 GVIRLQPRKVLSTRWVNKGSTSASESLVLWEGLPEEEATWEDSQQLLRSFPNLN 1329
>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 1923
Score = 585 bits (1509), Expect(3) = 0.0
Identities = 291/605 (48%), Positives = 412/605 (68%), Gaps = 3/605 (0%)
Frame = -1
Query: 2083 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKD-KFLWTHEAETAFLTLKDAMVTA 1907
+++KQLRGFLGL GYYRKF+RN+G ++KPLT LLKK F WT + + AF LK A+V+A
Sbjct: 300 QSVKQLRGFLGLAGYYRKFVRNFGTINKPLTQLLKKGVPFKWTAQMDEAFNALKQALVSA 359
Query: 1906 PVLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLM 1727
PVL LPDF+K F +ETDA G+GAVL Q+ PIA++SK L P + LS ++E+LA+L+
Sbjct: 360 PVLALPDFSKTFTVETDACDMGIGAVLSQDRHPIAFVSKALGPKTRGLSTYEKEYLAILL 419
Query: 1726 AIQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRV 1547
A+ +W+ YL +F+I TD L ++ DQR+ TP+Q K T+L+GL Y++ Y++G N
Sbjct: 420 AVDQWRSYLQHDEFVILTDHHNLMHITDQRLHTPLQHKAFTKLMGLQYKVCYRRGTSNAA 479
Query: 1546 VDTLSRRDVK-EDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRG 1370
D LSRRD + D A++ P WL V+ Y D +++ L PT F +
Sbjct: 480 ADALSRRDEETNDQLWAVSECQPLWLTAVVKGYETDEQAQQLLTELALHPTAREHFHLVQ 539
Query: 1369 GIVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLV 1190
G++RYKG++ IG + L+ ++ A+H S GGHSG TY R+K +F WP+MK + Q V
Sbjct: 540 GVLRYKGKIWIGHNLSLQQQLVTALHASPIGGHSGFPVTYQRVKALFAWPQMKKMIQQWV 599
Query: 1189 KSCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKY 1010
K+C C+ KPD YPGLLQPL +P AW+ +++DFIEGLPKS N ILVVVD+F++Y
Sbjct: 600 KNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDFIEGLPKSERYNCILVVVDKFSRY 659
Query: 1009 AHFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMS 830
AHF+ LSHPFSA +VA ++ IY+LHG+P ++SDRDKIFTS W+ LF G++L +S
Sbjct: 660 AHFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLISDRDKIFTSKLWEFLFLKSGIALHLS 719
Query: 829 SAYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQAL 650
SAYHPQSDGQT+R+N CLE +LRC + P W WL LA +WYNT +H++L T F+ L
Sbjct: 720 SAYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWLHLAGYWYNTCFHSALNKTPFEVL 779
Query: 649 YGYPPPLLSIGPYLDS-SINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSF 473
YG+ P L +G +++ +I + + +R+ ++L+ +L + ++K +ADK+RS + F
Sbjct: 780 YGHNP--LQLGVTMETCAIPDLAVWLHERKLMAELLQQHLHRVQQKMKFHADKNRSFREF 837
Query: 472 EVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFH 293
VGD VFLKLQP+ Q SV+ R KL+ ++YGP+ +L ++G VAY+L L + S IHPVFH
Sbjct: 838 AVGDWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILARVGTVAYKLQLPDDSTIHPVFH 897
Query: 292 VPLLK 278
V LK
Sbjct: 898 VSQLK 902
Score = 279 bits (714), Expect(3) = 0.0
Identities = 136/258 (52%), Positives = 177/258 (68%), Gaps = 4/258 (1%)
Frame = -2
Query: 2841 LLTKFQDVIAEPKGLPPSRGVEHQILIKQGSEPKHQFPYRTSHA*KNEIERIIKEMLEAW 2662
+L +FQ+V EP +PP R +H+I + +G+ P + PYR + A K+EIER + EML++
Sbjct: 43 VLDRFQEVFQEPTEMPPVRNCDHKIPLMEGASPVNLRPYRHTPALKDEIERQVTEMLQSG 102
Query: 2661 IIQNSKSPFASPVILVKKKDSTWRLCVDYRYLNGLTIKYDYPIPVIDELF----GAKFFS 2494
+IQNS S F+SP +LVKKKD TWRLC+DY++LN +TIK YP+PVIDEL GAK+FS
Sbjct: 103 VIQNSNSAFSSPALLVKKKDGTWRLCIDYKHLNAITIKGKYPLPVIDELLDELSGAKYFS 162
Query: 2493 KIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRK 2314
K+DLR+GY QI ++P T F TH+GHYE+ VM FGL APATFQ MN LRK
Sbjct: 163 KLDLRAGYHQIRLQPGEEHKTAFQTHSGHYEYRVMSFGLTGAPATFQKAMNDTLATVLRK 222
Query: 2313 FVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYG 2134
F LVFFDDILIYS H+ HL+QV L+ Q VK SKC+F Q ++ Y+GHII G
Sbjct: 223 FTLVFFDDILIYSPDLPSHIQHLEQVLQLLQAQQWKVKLSKCSFAQQQLAYLGHIIGKDG 282
Query: 2133 VAIDPQKISSMVQWPTPK 2080
V DP KI+ ++ W P+
Sbjct: 283 VTTDPSKIADVLHWKIPQ 300
Score = 55.8 bits (133), Expect(3) = 0.0
Identities = 21/63 (33%), Positives = 39/63 (61%)
Frame = -3
Query: 209 IEPFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSFNPWGQGLSPPR 30
+ P ++LD R++++ V QVL+ W++ + ATWED++ ++++FP WGQ
Sbjct: 923 VYPLQILDQRLIRKGNRTVSQVLVYWSDSVAEDATWEDREDLQQRFPMALAWGQATFQGE 982
Query: 29 GIV 21
G+V
Sbjct: 983 GVV 985
>gb|ABF93966.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1920
Score = 585 bits (1509), Expect(3) = 0.0
Identities = 291/605 (48%), Positives = 412/605 (68%), Gaps = 3/605 (0%)
Frame = -1
Query: 2083 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKD-KFLWTHEAETAFLTLKDAMVTA 1907
+++KQLRGFLGL GYYRKF+RN+G ++KPLT LLKK F WT + + AF LK A+V+A
Sbjct: 300 QSVKQLRGFLGLAGYYRKFVRNFGTINKPLTQLLKKGVPFKWTAQMDEAFNALKQALVSA 359
Query: 1906 PVLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLM 1727
PVL LPDF+K F +ETDA G+GAVL Q+ PIA++SK L P + LS ++E+LA+L+
Sbjct: 360 PVLALPDFSKTFTVETDACDMGIGAVLSQDRHPIAFVSKALGPKTRGLSTYEKEYLAILL 419
Query: 1726 AIQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRV 1547
A+ +W+ YL +F+I TD L ++ DQR+ TP+Q K T+L+GL Y++ Y++G N
Sbjct: 420 AVDQWRSYLQHDEFVILTDHHNLMHITDQRLHTPLQHKAFTKLMGLQYKVCYRRGTSNAA 479
Query: 1546 VDTLSRRDVK-EDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRG 1370
D LSRRD + D A++ P WL V+ Y D +++ L PT F +
Sbjct: 480 ADALSRRDEETNDQLWAVSECQPLWLTAVVKGYETDEQAQQLLTELALHPTAREHFHLVQ 539
Query: 1369 GIVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLV 1190
G++RYKG++ IG + L+ ++ A+H S GGHSG TY R+K +F WP+MK + Q V
Sbjct: 540 GVLRYKGKIWIGHNLSLQQQLVTALHASPIGGHSGFPVTYQRVKALFAWPQMKKMIQQWV 599
Query: 1189 KSCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKY 1010
K+C C+ KPD YPGLLQPL +P AW+ +++DFIEGLPKS N ILVVVD+F++Y
Sbjct: 600 KNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDFIEGLPKSERYNCILVVVDKFSRY 659
Query: 1009 AHFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMS 830
AHF+ LSHPFSA +VA ++ IY+LHG+P ++SDRDKIFTS W+ LF G++L +S
Sbjct: 660 AHFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLISDRDKIFTSKLWEFLFLKSGIALHLS 719
Query: 829 SAYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQAL 650
SAYHPQSDGQT+R+N CLE +LRC + P W WL LA +WYNT +H++L T F+ L
Sbjct: 720 SAYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWLHLAGYWYNTCFHSALNKTPFEVL 779
Query: 649 YGYPPPLLSIGPYLDS-SINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSF 473
YG+ P L +G +++ +I + + +R+ ++L+ +L + ++K +ADK+RS + F
Sbjct: 780 YGHNP--LQLGVTMETCAIPDLAVWLHERKLMAELLQQHLHRVQQKMKFHADKNRSFREF 837
Query: 472 EVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFH 293
VGD VFLKLQP+ Q SV+ R KL+ ++YGP+ +L ++G VAY+L L + S IHPVFH
Sbjct: 838 AVGDWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILARVGTVAYKLQLPDDSTIHPVFH 897
Query: 292 VPLLK 278
V LK
Sbjct: 898 VSQLK 902
Score = 279 bits (714), Expect(3) = 0.0
Identities = 136/258 (52%), Positives = 177/258 (68%), Gaps = 4/258 (1%)
Frame = -2
Query: 2841 LLTKFQDVIAEPKGLPPSRGVEHQILIKQGSEPKHQFPYRTSHA*KNEIERIIKEMLEAW 2662
+L +FQ+V EP +PP R +H+I + +G+ P + PYR + A K+EIER + EML++
Sbjct: 43 VLDRFQEVFQEPTEMPPVRNCDHKIPLMEGASPVNLRPYRHTPALKDEIERQVTEMLQSG 102
Query: 2661 IIQNSKSPFASPVILVKKKDSTWRLCVDYRYLNGLTIKYDYPIPVIDELF----GAKFFS 2494
+IQNS S F+SP +LVKKKD TWRLC+DY++LN +TIK YP+PVIDEL GAK+FS
Sbjct: 103 VIQNSNSAFSSPALLVKKKDGTWRLCIDYKHLNAITIKGKYPLPVIDELLDELSGAKYFS 162
Query: 2493 KIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRK 2314
K+DLR+GY QI ++P T F TH+GHYE+ VM FGL APATFQ MN LRK
Sbjct: 163 KLDLRAGYHQIRLQPGEEHKTAFQTHSGHYEYRVMSFGLTGAPATFQKAMNDTLATVLRK 222
Query: 2313 FVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYG 2134
F LVFFDDILIYS H+ HL+QV L+ Q VK SKC+F Q ++ Y+GHII G
Sbjct: 223 FTLVFFDDILIYSPDLPSHIQHLEQVLQLLQAQQWKVKLSKCSFAQQQLAYLGHIIGKDG 282
Query: 2133 VAIDPQKISSMVQWPTPK 2080
V DP KI+ ++ W P+
Sbjct: 283 VTTDPSKIADVLHWKIPQ 300
Score = 55.8 bits (133), Expect(3) = 0.0
Identities = 21/63 (33%), Positives = 39/63 (61%)
Frame = -3
Query: 209 IEPFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSFNPWGQGLSPPR 30
+ P ++LD R++++ V QVL+ W++ + ATWED++ ++++FP WGQ
Sbjct: 923 VYPLQILDQRLIRKGNRTVSQVLVYWSDSVAEDATWEDREDLQQRFPMALAWGQATFQGE 982
Query: 29 GIV 21
G+V
Sbjct: 983 GVV 985
>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 542 bits (1397), Expect(3) = 0.0
Identities = 279/611 (45%), Positives = 388/611 (63%), Gaps = 4/611 (0%)
Frame = -1
Query: 2083 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 1904
K +K +RGFLGLT YYRKFI++YG ++KPLT L KKD F+W + + AF LK + T+P
Sbjct: 607 KNVKGVRGFLGLTDYYRKFIKDYGKIAKPLTELTKKDAFMWNEKTQDAFDQLKRRLTTSP 666
Query: 1903 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 1724
VL LPDF K FV+E DASG G+GA+LMQ+ +P+AY SK L N S ++E +AV++A
Sbjct: 667 VLALPDFNKEFVIECDASGGGIGAILMQDRKPVAYYSKALGVRNLTKSAYEKELMAVVLA 726
Query: 1723 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 1544
IQ W+ YL G +F++ TDQ++LK LL QR++T QQ W +LLG D+EI YK G N+
Sbjct: 727 IQHWRPYLLGRRFVVSTDQKSLKQLLQQRVVTAEQQNWAAKLLGYDFEIIYKPGKLNKGA 786
Query: 1543 DTLSRRDVKEDN--CNALTTITPTWLQEVI--NSYANDSFFAKVIAANTLDPTTYPDFIV 1376
D LSR V+ED C +T++ W E + + DS K+I D ++ P +++
Sbjct: 787 DALSR--VREDGELCQGITSVQ--WKDEKLLREELSRDSQLQKIIGDLQRDASSRPGYML 842
Query: 1375 RGGIVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQ 1196
+ G++ Y+GRL + S + +LA H++ GGHSG TY RL YW MK+ V +
Sbjct: 843 KQGVLLYEGRLVVSSKSVMIPTLLAEFHSTPQGGHSGFYRTYRRLAANVYWVGMKNTVQE 902
Query: 1195 LVKSCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFT 1016
V+SCDTC+ K + GLLQPL VP + W+ ++MDFI GLPKS G +LVVVDR +
Sbjct: 903 YVRSCDTCQRQKYLASSPGGLLQPLPVPDRIWEDLSMDFIMGLPKSKGYEAVLVVVDRLS 962
Query: 1015 KYAHFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLD 836
KY+HF+ L HP++A +A +F+ + RLHG+P+SIVSDRD IF SNFWKELFKL G L
Sbjct: 963 KYSHFILLKHPYTAKVIADVFIREVVRLHGIPLSIVSDRDPIFMSNFWKELFKLQGTKLK 1022
Query: 835 MSSAYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQ 656
MS AYHP++DGQTE +N CLE YLRC + + PK+W W+ AE+W+NT+YH + T F+
Sbjct: 1023 MSIAYHPETDGQTEVVNRCLETYLRCFIADQPKNWASWIPWAEYWFNTSYHAATGHTPFE 1082
Query: 655 ALYGYPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKS 476
+YG PPP+++ ++ + + R A++ LR+ L++A R+K ADK R
Sbjct: 1083 MVYGRPPPVITRWVQGETRVEAVQRELLDRDEALKQLREQLLRAQVRMKQIADKKRIH-- 1140
Query: 475 FEVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVF 296
KL+ARY+ PY V ++G VAY+L L EGS++H VF
Sbjct: 1141 ------------------------AKLAARYHRPYPVEARVGAVAYKLKLPEGSRVHSVF 1176
Query: 295 HVPLLKKRVSD 263
HV LLKK V +
Sbjct: 1177 HVSLLKKAVGN 1187
Score = 329 bits (844), Expect(3) = 0.0
Identities = 176/466 (37%), Positives = 272/466 (58%), Gaps = 14/466 (3%)
Frame = -2
Query: 3435 EEDIVETQSCIMEEVQMS*NALVGEDGVTTMRLYGESSDHILHILIDSGSTLSFIQESTT 3256
+E+ + + C+ME + G +++L G + + +L+DSG+T +FI +
Sbjct: 155 DEEEGDGEMCMMEFFHL------GHSRPQSIKLMGVIKEVPVVVLVDSGATHNFISQQLV 208
Query: 3255 KKLGCELKSIKLLLVKVANGQKMVSSHVVDGFQWKMQGHTFTYPLRLLQNEGCDMILGGD 3076
K+ + + +K+ +G + +G + + +L G DM+LG +
Sbjct: 209 HKMNWAVVDTPCMSIKLGDGSYSKTKGTCEGLEVDVGDVHLEIDAQLFDLGGVDMVLGIE 268
Query: 3075 WLKSCTPIELDYDKMTFTVNLLGRRVKIQELTSLAECKFISGPSLYKLMHMSCPTEIEEM 2896
WL++ + ++++K T + + V ++ + + G ++ L + C +
Sbjct: 269 WLRTLGDMIVNWNKQTMSFWHNKKWVTVKGMDT-------QGGAIATLQSIICKSRRRST 321
Query: 2895 YWVTVDGPSFEDNP----------DMQILLTKFQDVIAEPKGLPPSRGVEHQILIKQGSE 2746
W T + ED ++++LL + V EP GLPP R EH I +K+G
Sbjct: 322 GWWTYEDKCKEDGSIHTLASEQSRELELLLENYGGVFQEPTGLPPKRKKEHVITLKEGEG 381
Query: 2745 PKHQFPYRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYL 2566
+ PYR H KNEIE+ ++EML+A II++S S F+SPVILVK+KD++WR+C+DYR L
Sbjct: 382 AVNVRPYRYPHHHKNEIEKQVREMLQAGIIRHSTSSFSSPVILVKEKDNSWRMCIDYRAL 441
Query: 2565 NGLTIKYDYPIPVI----DELFGAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEF 2398
N T+ +PIPVI DEL GA+F+SK+DL+SGY Q+ +K E T F TH HYE+
Sbjct: 442 NKATVPDKFPIPVIEELLDELHGARFYSKLDLKSGYHQVRVKEEDIHKTAFRTHEDHYEY 501
Query: 2397 LVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRN 2218
LVMPFGL NAP+TFQSLMN +FR LRKFVLVFFDDIL+YS+ W+ H+ H+++V ++
Sbjct: 502 LVMPFGLMNAPSTFQSLMNDVFRLLLRKFVLVFFDDILVYSQDWKTHMEHVEEVLRIMQT 561
Query: 2217 NQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPK 2080
+ L + KC FGQ +EY+GH+IS GVA+DP K+ S+ +WP PK
Sbjct: 562 HGLVANKKKCYFGQETVEYLGHLISKEGVAVDPSKVVSVTRWPIPK 607
Score = 45.4 bits (106), Expect(3) = 0.0
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = -3
Query: 209 IEPFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSF 63
IEP VL R ++ + + QVL+ W V++ATWED I +FP+F
Sbjct: 1205 IEPETVLTRRTIQVQGEKIDQVLVHWMGQKVEEATWEDTLIIRSQFPNF 1253
>ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075, partial [Sorghum bicolor]
Length = 1414
Score = 518 bits (1335), Expect(3) = 0.0
Identities = 282/631 (44%), Positives = 386/631 (61%), Gaps = 12/631 (1%)
Frame = -1
Query: 2083 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 1904
++ + +RGFLGL GYYRKF+ NYG ++ PLT LLKK+ F W EAE AF LK A+ +AP
Sbjct: 695 RSARAVRGFLGLAGYYRKFVHNYGAIAAPLTALLKKEGFTWGAEAEAAFSALKGAVTSAP 754
Query: 1903 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 1724
VLTLPDF+KPF++E DAS G GAVL+QEG PIA+ S+ + P +++L+ +RE + +++A
Sbjct: 755 VLTLPDFSKPFIVECDASTYGFGAVLIQEGHPIAFFSRPVAPRHRSLAAYERELIGLVLA 814
Query: 1723 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 1544
++ W+ YL G +F++KTD +LKYLLDQR+ T Q W+ +LLG D+ ++YK G N V
Sbjct: 815 VRHWRPYLWGRRFIVKTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFTVEYKSGASNTVA 874
Query: 1543 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDP---TTYPD---- 1385
D LSRRD +ED+ L I S F A++ A DP T + D
Sbjct: 875 DALSRRDTEEDSVGGLQAI----------SAPRFDFIARLRHAQATDPALVTIHDDIRAG 924
Query: 1384 -----FIVRGGIVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWP 1220
+ V G+V Y GRL I L I+AA+H Y GH GV T RL+ F++P
Sbjct: 925 SRAAPWTVADGMVLYDGRLYIPPSSPLVQEIVAAVH---YDGHEGVQRTLHRLRRDFHFP 981
Query: 1219 KMKDDVIQLVKSCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVI 1040
+M+ V V++C TC+ K ++ GLL PL VPT W I +DF+E LP+ GK+VI
Sbjct: 982 QMRRIVQDFVRACVTCQRYKSEHLLPAGLLLPLPVPTVVWADIGLDFVEALPRVQGKSVI 1041
Query: 1039 LVVVDRFTKYAHFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELF 860
L VVDRF+KY HF+AL+HP++A VA+ F I RLHG+P S+VSDRD +FTS FW+EL
Sbjct: 1042 LTVVDRFSKYCHFIALAHPYTAETVAQAFFTDIVRLHGVPQSMVSDRDPVFTSAFWRELM 1101
Query: 859 KLMGVSLDMSSAYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHT 680
+LMG L M+SA+HPQSDGQTE N + YLRC + P+ W RWL AE+ YNT Y +
Sbjct: 1102 RLMGTKLHMTSAFHPQSDGQTEAANRVIVMYLRCFTGDRPRQWLRWLPWAEYVYNTAYQS 1161
Query: 679 SLKTTHFQALYGYPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYA 500
SL+ T F+ +YG PP + ++ + + +R+ + +R L QA K
Sbjct: 1162 SLRETPFRVVYGRDPPTIRSYEPGETRVAAVARDMEEREAFLADVRYRLEQAQAAQKLQY 1221
Query: 499 DKHRSEKSFEVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLE 320
DKH + ++V D L+L+ S+ + KL AR+ GPY V+E I VA RL L
Sbjct: 1222 DKHHRQVVYQVDDWALLRLRQRAPASLPQATTGKLKARFLGPYRVVEIINDVAVRLALPA 1281
Query: 319 GSKIHPVFHVPLLKKRVSDGTQPSPELPLAD 227
++IH VFHV LKK V GT P+ PL D
Sbjct: 1282 QARIHDVFHVSTLKKFV--GTPPTAPPPLPD 1310
Score = 332 bits (850), Expect(3) = 0.0
Identities = 181/412 (43%), Positives = 244/412 (59%), Gaps = 4/412 (0%)
Frame = -2
Query: 3303 LIDSGSTLSFIQESTTKKLGCELKSIKLLLVKVANGQKMVSSHVVDGFQWKMQGHTFTYP 3124
L+DSGST +FI E ++ G ++ + VANG+K+ V+ + TF
Sbjct: 310 LLDSGSTHNFIAEEAARRTGLRVQPRARMTAMVANGEKIPCPGVIRHAPVTIDNTTFAID 369
Query: 3123 LRLLQNEGCDMILGGDWLKSCTPIELDYDKMTFTVNLLGRRVKIQELTSLAECKFISGPS 2944
L ++ G D++LG W+ + PI D+ + + GR A C + PS
Sbjct: 370 LFVMPLAGYDIVLGTQWMATLGPIVWDFAARSLSFTYQGR----------AFC-WAGVPS 418
Query: 2943 LYKLMHMSCPTEIEEMYWVTVDGPSFEDNPDMQILLTKFQDVIAEPKGLPPSRGVEHQIL 2764
T + T S D LL + D+ EP G+PP R +H I
Sbjct: 419 ----------TGAPSLRAATASSASLLDG-----LLAAYDDIFTEPSGMPPPRARDHAIT 463
Query: 2763 IKQGSEPKHQFPYRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLC 2584
+K GS P PYR A K+E+ER M++ I++ S S F+SPV+LVKK D +WR C
Sbjct: 464 LKPGSAPVVVRPYRYPAAHKDELERQCTAMIQQGIVRRSDSAFSSPVLLVKKADGSWRFC 523
Query: 2583 VDYRYLNGLTIKYDYPIPVIDELF----GAKFFSKIDLRSGYFQILMKPEHRFLTTFSTH 2416
VDYR LN LT+K +PIPV+DEL GA+FF+K+DLRSGY Q+ M+PE T F TH
Sbjct: 524 VDYRALNALTVKDAFPIPVVDELLDELHGARFFTKLDLRSGYHQVRMRPEDVHKTAFRTH 583
Query: 2415 NGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQV 2236
+G YEFLVMPFGLCNAPATFQ+LMN + R YLR+FVLVFFDDILIYS +W +HL HL+ V
Sbjct: 584 DGLYEFLVMPFGLCNAPATFQALMNDVLRAYLRRFVLVFFDDILIYSTTWADHLRHLRVV 643
Query: 2235 FLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPK 2080
LR ++L+VKRSKC+FG + Y+GH+IS GVA+DP K+ ++ WP P+
Sbjct: 644 LDILRRHRLFVKRSKCSFGVSSVAYLGHVISAAGVAMDPAKVQAIHDWPQPR 695
Score = 31.2 bits (69), Expect(3) = 0.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 155 VPQVLIQWANLGVDKATWEDKKFIEKKFPSF 63
V QVL+ W ATWED +K+P+F
Sbjct: 1332 VRQVLVHWQGEPSSSATWEDLDDFREKYPAF 1362
>ref|XP_010468466.1| PREDICTED: uncharacterized protein LOC104748542 [Camelina sativa]
Length = 1813
Score = 544 bits (1402), Expect(2) = 0.0
Identities = 279/582 (47%), Positives = 380/582 (65%), Gaps = 5/582 (0%)
Frame = -1
Query: 2080 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 1901
++K+LRGFLGLTGYYR F+R YGV+++PLT LL+KD F W+ +A+ AF LK+AM +APV
Sbjct: 1178 SVKELRGFLGLTGYYRCFVRGYGVIARPLTELLRKDMFEWSAKAQLAFEALKEAMSSAPV 1237
Query: 1900 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 1721
L LP+F K FV+E DASG G+GAVLMQ+ RPIA+ S L P Q + +RE +A+++A+
Sbjct: 1238 LALPNFAKTFVVEADASGYGLGAVLMQDRRPIAFFSVGLTPREQLKPVYERELMAIVLAV 1297
Query: 1720 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 1541
QKWKHYL G +F + TDQ++LK+LL+QR +T Q+W+T+LL D+EI YK G +N+ D
Sbjct: 1298 QKWKHYLMGRRFTVHTDQKSLKFLLEQREVTMDYQRWLTKLLPYDFEIVYKAGVDNKAAD 1357
Query: 1540 TLSR-----RDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIV 1376
LSR V + A+T + +Q++ D + I F V
Sbjct: 1358 GLSRILHSTGSVSAMDLFAITVPSVIQMQDIFKEIEEDVEIQRRIREFDSLKMASRGFEV 1417
Query: 1375 RGGIVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQ 1196
+ G + +K +L I K +IL HNS +GGHSGV T R++ FYWP+M V +
Sbjct: 1418 KDGKLWFKTKLVIPPTSKFIPLILDVFHNSQFGGHSGVLKTVKRIQLSFYWPRMLRMVRK 1477
Query: 1195 LVKSCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFT 1016
V C C+ +K + GLLQPL +P W + MDF+EGLP S G N ILVVVDR +
Sbjct: 1478 YVSECAICQTHKSSTLSPAGLLQPLPIPQAVWSDVNMDFVEGLPASQGFNAILVVVDRLS 1537
Query: 1015 KYAHFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLD 836
KY HF+AL HPFSAS+VA+ F+ I RLHG P SIVSDRD+IF S+FWKE FKL G L
Sbjct: 1538 KYGHFIALKHPFSASDVAQKFVAEIVRLHGFPASIVSDRDRIFLSHFWKESFKLAGTKLK 1597
Query: 835 MSSAYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQ 656
S+A+HPQ+DGQTE LN C+E+YLRC +P+ W+++LS AE WYNT+YHT+LK T F+
Sbjct: 1598 YSTAFHPQTDGQTEVLNRCMESYLRCFASAHPRTWYKFLSWAELWYNTSYHTALKATTFK 1657
Query: 655 ALYGYPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKS 476
LYG PP L L + E ++ +R R ++ ++ +L+ A +K ADKHR +
Sbjct: 1658 VLYGRDPPALLHYEPLSTQNCELEKMLQERDRMLEDIKGHLVHAQQLMKNNADKHRRDVE 1717
Query: 475 FEVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIG 350
F V V+LKL+P+RQ+SV R KLSA+Y+GP+ VL + G
Sbjct: 1718 FAVDSWVYLKLRPYRQHSVVKRICQKLSAKYFGPFRVLARFG 1759
Score = 311 bits (798), Expect(2) = 0.0
Identities = 184/450 (40%), Positives = 266/450 (59%), Gaps = 13/450 (2%)
Frame = -2
Query: 3393 VQMS*NALVGEDGVTTMRLYGESSDHILHILIDSGSTLSFIQESTTKKLGCELKSIKLLL 3214
+++S ++ +G +T ++ G + + ++IDSG+T +FI ++L + ++ L
Sbjct: 739 MELSYSSFMGLSSPSTTKMRGIINHGEVLMMIDSGATHNFITPRMVERLQIQTQAGANLN 798
Query: 3213 VKVANGQKMVSSHVVDGFQWKMQGHTFTYPLRLLQNEGCDMILGGDWLKSCTPIELDY-- 3040
+K+ G + V + +QG +F +L+ D+ILG WL++ +++
Sbjct: 799 IKLGTGVMVQGVGVCRNLSFYIQGWSFPSDFIILELGQVDVILGIYWLRTLGNCNVNWAT 858
Query: 3039 DKMTFTVN-LLGRRVKIQELTSLAECKFISGPSLYKLMHMSCPTEIEEMYWVTVDGPSFE 2863
+ +FT N L V EL LA C + GPS + +E+ +
Sbjct: 859 HEYSFTYNNQLVNLVGDTEL-QLAGCA-LQGPSPF----------LEDAAFGQFHAHEVN 906
Query: 2862 DNPDMQI------LLTKFQDVIAEPKGLPPSRGVEHQILIKQGSEPKHQFPYRTSHA*KN 2701
+ + + +L +F V EP GLPP RG EH I + G PYR HA K
Sbjct: 907 SDQTLALPRVVDEVLQQFDSVFVEPTGLPPLRGREHAINLVAGVTAVSVRPYRYPHAQKE 966
Query: 2700 EIERIIKEMLEAWIIQNSKSPFASPVILVKKKDSTWRLCVDYRYLNGLTIKYDYPIPVID 2521
++R+++EML+A I+ S+SPF+SPV+LVKKKD++WR CVDYR LN TI +PIP+ID
Sbjct: 967 IMKRLVREMLQAGTIRPSRSPFSSPVLLVKKKDASWRFCVDYRALNQATIPDKFPIPMID 1026
Query: 2520 ELF----GAKFFSKIDLRSGYFQILMKPEHRFLTTFSTHNGHYEFLVMPFGLCNAPATFQ 2353
+L GA FSK+DLR+GY QI MK T F TH+GHYEFLVMPFGL NAPATFQ
Sbjct: 1027 QLLDELDGAIIFSKLDLRAGYHQIRMKESDVEKTAFRTHDGHYEFLVMPFGLTNAPATFQ 1086
Query: 2352 SLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQQVFLTLRNNQLYVKRSKCNFGQL 2173
+LMN++FR YLRKF+LVFFDDILIYS S EEH+ HL V +QL+ R KC+F Q
Sbjct: 1087 ALMNELFRPYLRKFILVFFDDILIYSASLEEHVEHLSVVLKIFVEHQLFANRKKCSFAQS 1146
Query: 2172 EIEYIGHIISHYGVAIDPQKISSMVQWPTP 2083
++Y+GH+IS GV+ DP K ++M++WPTP
Sbjct: 1147 RVDYLGHLISASGVSTDPSKTAAMMKWPTP 1176
>gb|AAK92545.1|AC051624_3 Putative retroelement [Oryza sativa Japonica Group]
gi|31431040|gb|AAP52878.1| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group] gi|113638940|dbj|BAF26245.1| Os10g0317000 [Oryza
sativa Japonica Group]
Length = 1476
Score = 505 bits (1300), Expect(3) = 0.0
Identities = 270/616 (43%), Positives = 375/616 (60%)
Frame = -1
Query: 2083 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 1904
++ + +RGFLGL GYYRKF+ +YG ++ PLT L KK+ F W+ E TAF LK A+ TAP
Sbjct: 757 RSARTVRGFLGLAGYYRKFVHDYGTIAAPLTALTKKEGFRWSDEVATAFHALKHAVTTAP 816
Query: 1903 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 1724
VL LPDF KPFV+E DAS G GAVL+Q+ P+A+ S+ + P ++AL+ +RE + +++A
Sbjct: 817 VLALPDFVKPFVVECDASTHGFGAVLLQDKHPLAFFSRPVAPRHRALAAYERELIGLVLA 876
Query: 1723 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 1544
I+ W+ YL G F+++TD +LKYLLDQR+ T Q W+ +LLG D+ ++YK G N V
Sbjct: 877 IRHWRPYLWGRAFVVRTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFTVEYKSGASNVVA 936
Query: 1543 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1364
D LSRRD E AL+ +++ + + + + A + P + +R G+
Sbjct: 937 DALSRRDTDEGAVLALSAPRFDYIERLRAAQTTEPALVAIRDAIQAGTRSAP-WALRDGM 995
Query: 1363 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1184
V + RL I L ILAA+H GH GV T RL+ F+ P M+ V + V++
Sbjct: 996 VMFDSRLYIPPSSPLLHEILAAIHTD---GHEGVQRTLHRLRRDFHSPAMRRVVQEFVRA 1052
Query: 1183 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1004
CDTC+ NK ++ GLL PL VPT W I +DF+E LP+ GK VIL VVDRF+KY H
Sbjct: 1053 CDTCQRNKSEHLHPGGLLLPLPVPTTVWADIGLDFVEALPRVGGKTVILTVVDRFSKYCH 1112
Query: 1003 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 824
F+ L+HP++A +VA+ F I RLHG+P S+VSDRD +FTS+FW+EL +L G + M++A
Sbjct: 1113 FIPLAHPYTAESVAQAFYADIVRLHGIPQSMVSDRDPVFTSSFWRELMRLTGTKMHMTTA 1172
Query: 823 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 644
HPQSDGQTE N + YLRC + P+ W RWL AE+ YNT Y TSL+ T F+ +YG
Sbjct: 1173 IHPQSDGQTEAANKVIVMYLRCFTGDRPRQWVRWLPWAEYIYNTAYQTSLRDTPFRVVYG 1232
Query: 643 YPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVG 464
PP++ ++ + ++ R + +R L QA K Y DK S+EVG
Sbjct: 1233 RDPPIIRSYEPGETRVAAVARSMADRDEFLADVRYRLEQAQATHKKYYDKGHRAVSYEVG 1292
Query: 463 DQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPL 284
D V L+L+ S+ KL RY+GPY V+E I VA RL+L +K+H VFHV L
Sbjct: 1293 DLVLLRLRHRAPASLPQVSKGKLKPRYFGPYRVVEVINPVAVRLELPPRAKLHDVFHVGL 1352
Query: 283 LKKRVSDGTQPSPELP 236
LKK V P LP
Sbjct: 1353 LKKFVGAAPPSPPALP 1368
Score = 339 bits (869), Expect(3) = 0.0
Identities = 195/416 (46%), Positives = 248/416 (59%), Gaps = 8/416 (1%)
Frame = -2
Query: 3303 LIDSGSTLSFIQESTTKKLGCELKSIKLLLVKVANGQKMVSSHVVDGFQWKMQGHTFTYP 3124
L+D+GST +FI E + G ++ L VANG+K+ V+ +QG F
Sbjct: 353 LVDTGSTHNFIGEDAALRTGLPVQPRPRLTATVANGEKVSCPGVLRRAPITIQGMAFDVD 412
Query: 3123 LRLLQNEGCDMILGGDWLKSC-TPIELDYDKMTFTVNLLGRRVKIQELT--SLAECKFIS 2953
L ++ G DM+LG W+ T I D T + GR V Q L A+ +S
Sbjct: 413 LYVMPLAGYDMVLGTQWMAHLGTTIAWDVTTGTVSFQHQGRTVSWQSLPPHQRADVHAVS 472
Query: 2952 -GPSLYKLMHMSCPTEIEEMYWVTVDGPSFEDNPDMQILLTKFQDVIAEPKGLPPSRGVE 2776
G SL S T +DG LL F DV AEP+GLPP RG +
Sbjct: 473 TGTSLVAATGSSSSTPAPTTEPALLDG-----------LLGSFDDVFAEPRGLPPPRGRD 521
Query: 2775 HQILIKQGSEPKHQFPYRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDST 2596
H I + G+ P PYR A K+E+ER M+E +I+ S S F+SPV+LVKK D +
Sbjct: 522 HAIHLLPGAPPVAVRPYRYPVAHKDELERQCAVMMEQGLIRRSTSAFSSPVLLVKKADGS 581
Query: 2595 WRLCVDYRYLNGLTIKYDYPIPVIDELF----GAKFFSKIDLRSGYFQILMKPEHRFLTT 2428
WR CVDYR LN +TIK YPIPV+DEL GAKFF+K+DLRSGY Q+ M+ E T
Sbjct: 582 WRFCVDYRALNAITIKDAYPIPVVDELLDELHGAKFFTKLDLRSGYHQVRMRAEDVAKTA 641
Query: 2427 FSTHNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLH 2248
F TH+G YEFLVMPFGLCNAPATFQ+LMN I R YLR+FVLVFFDDILIYS +W +HL H
Sbjct: 642 FRTHDGLYEFLVMPFGLCNAPATFQALMNDILRIYLRRFVLVFFDDILIYSNTWADHLRH 701
Query: 2247 LQQVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPK 2080
++ V L LR ++L+VKRSKC FG I Y+GHII GV++DP K+ ++V WP P+
Sbjct: 702 IRAVLLLLRQHRLFVKRSKCAFGVSSISYLGHIIGATGVSMDPAKVQAVVDWPQPR 757
Score = 34.3 bits (77), Expect(3) = 0.0
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -3
Query: 221 GQFKIEPFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPSF 63
G EP RV R+ + V QVL+ W ATWED ++++P+F
Sbjct: 1373 GAIDPEPERVTRSRLARG----VRQVLVHWKGESAASATWEDLDTFKERYPAF 1421
>gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Japonica Group]
gi|108706172|gb|ABF93967.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1461
Score = 501 bits (1291), Expect(3) = 0.0
Identities = 268/628 (42%), Positives = 374/628 (59%), Gaps = 12/628 (1%)
Frame = -1
Query: 2083 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 1904
++ + +RGFLGL GYYRKF+ NYG ++ PLT LLKK+ F WT A AF LK A+ +AP
Sbjct: 742 RSARAVRGFLGLAGYYRKFVHNYGTIAAPLTALLKKEGFAWTEAATAAFDALKAAVSSAP 801
Query: 1903 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 1724
+L +PDFTK F +E DAS G GAVL+Q+G P+A+ S+ + P ++AL+ +RE + +++A
Sbjct: 802 ILAMPDFTKAFTVECDASSHGFGAVLIQDGHPLAFFSRPVAPRHRALAAYERELIGLVLA 861
Query: 1723 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 1544
++ W+ YL G F +KTD +LKYLLDQR+ T Q W+ +LLG D+ ++YK G N V
Sbjct: 862 VRHWRPYLWGRHFTVKTDHYSLKYLLDQRLSTIPQHHWVGKLLGFDFTVEYKPGAANTVA 921
Query: 1543 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDP------------ 1400
D LSRRD ED + L P + F ++ A +DP
Sbjct: 922 DALSRRDTTED-ASVLVLSAPRF-----------DFIERLRQAQDVDPALVALQAEIRSG 969
Query: 1399 TTYPDFIVRGGIVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWP 1220
T + + G+V + GRL + L +L A+H GH GV T RL+ F++P
Sbjct: 970 TRAGPWSMADGMVLFAGRLYLPPASPLLQEVLRAVHEE---GHEGVQRTLHRLRRDFHFP 1026
Query: 1219 KMKDDVIQLVKSCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVI 1040
MK V V++C+ C+ K ++ GLL PL VP W + +DF+E LP+ GK+VI
Sbjct: 1027 NMKSVVQDFVRTCEVCQRYKAEHLQPAGLLLPLPVPQGVWTDVALDFVEALPRVRGKSVI 1086
Query: 1039 LVVVDRFTKYAHFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELF 860
L VVDRF+KY HF+ L+HP+SA +VA++F I RLHG+P S+VSDRD +FTS FW EL
Sbjct: 1087 LTVVDRFSKYCHFIPLAHPYSAESVAQVFFAEIVRLHGVPQSMVSDRDPVFTSAFWSELM 1146
Query: 859 KLMGVSLDMSSAYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHT 680
+L+G L M++A+HPQSDGQ+E N + YLRC+ + P+ W RWL AEF +NT Y T
Sbjct: 1147 RLVGTKLHMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPRQWLRWLPWAEFVFNTAYQT 1206
Query: 679 SLKTTHFQALYGYPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYA 500
SL+ T F+ +YG PP + D+ + + +R ++ +R L QA K Y
Sbjct: 1207 SLRDTPFRVVYGRDPPSIRSYEPGDTRVAAVAKSMEERSEFLEDIRYRLEQAQAIQKKYY 1266
Query: 499 DKHRSEKSFEVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLE 320
DK SF+VGD V L+L+ S+SL S KL RY+GPY + E I VA RL L
Sbjct: 1267 DKSHRAVSFQVGDWVLLRLRQRAPASLSLAVSGKLKPRYFGPYRIAEMINEVAARLALPA 1326
Query: 319 GSKIHPVFHVPLLKKRVSDGTQPSPELP 236
G+++H VFH+ LLKK P LP
Sbjct: 1327 GARLHDVFHIGLLKKWHGAPPDAPPPLP 1354
Score = 338 bits (866), Expect(3) = 0.0
Identities = 183/416 (43%), Positives = 247/416 (59%), Gaps = 8/416 (1%)
Frame = -2
Query: 3303 LIDSGSTLSFIQESTTKKLGCELKSIKLLLVKVANGQKMVSSHVVDGFQWKMQGHTFTYP 3124
L+D+GST +FI ES + G ++ + VANG+K+ V+ ++G F
Sbjct: 358 LVDTGSTHNFIGESAAARTGLSVQPRPRMTATVANGEKVACPGVLRHAPITIEGMPFHVD 417
Query: 3123 LRLLQNEGCDMILGGDWLKSCTPIELDYDKMTFTVNLLGRRVKIQELTSLAECKFISGPS 2944
L ++ G D++LG W+ + D T +L GR + Q
Sbjct: 418 LYVMPLAGYDIVLGTQWMAKLGRMSWDVTTRALTFDLEGRTICWQ--------------- 462
Query: 2943 LYKLMHMSCPTEIEEMYWVTVDGPSFE----DNPDMQILLTKFQDVIAEPKGLPPSRGVE 2776
P + DGP+ D+ + LL F DV EP GLPP RG +
Sbjct: 463 -------GAPNQ---------DGPAVRAASADDSLLGGLLDSFADVFTEPTGLPPQRGRD 506
Query: 2775 HQILIKQGSEPKHQFPYRTSHA*KNEIERIIKEMLEAWIIQNSKSPFASPVILVKKKDST 2596
H I++KQG+ P PYR A K+E+ER M+ I++ S S F+SPV+LVKK DS+
Sbjct: 507 HAIVLKQGTSPVAVRPYRYPAAHKDELERQCAAMISQGIVRRSDSAFSSPVLLVKKADSS 566
Query: 2595 WRLCVDYRYLNGLTIKYDYPIPVIDELF----GAKFFSKIDLRSGYFQILMKPEHRFLTT 2428
WR CVDYR LN LT+K +PIPV+DEL GA+FFSK+DLRSGY Q+ M+PE T
Sbjct: 567 WRFCVDYRALNALTVKDAFPIPVVDELLDELHGARFFSKLDLRSGYHQVRMRPEDIHKTA 626
Query: 2427 FSTHNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLH 2248
F TH+G YEFLVMPFGLCNAPATFQ+LMN + R +LR+FVLVFFDDILIYS +W +HL H
Sbjct: 627 FRTHDGLYEFLVMPFGLCNAPATFQALMNDVLRSFLRRFVLVFFDDILIYSDTWADHLRH 686
Query: 2247 LQQVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPK 2080
L+ V LR ++L++KRSKC FG + Y+GH+IS GVA+DP K+ ++ +WP P+
Sbjct: 687 LRAVLTVLREHKLFIKRSKCAFGVDSVAYLGHVISAAGVAMDPAKVQAIREWPQPR 742
Score = 35.4 bits (80), Expect(3) = 0.0
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 221 GQFKIEPFRVLDHRIVKRKQNMVPQVLIQWANLGVDKATWEDKKFIEKKFPS 66
G EP RV+ R+ + V QVL+QW ATWED++ ++P+
Sbjct: 1359 GAVACEPERVIKARLARG----VRQVLVQWKGTSAASATWEDREPFFARYPA 1406