BLASTX nr result

ID: Rehmannia28_contig00019122 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00019122
         (779 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB71940.1| hypothetical protein B456_011G148900, partial [Go...   116   1e-28
ref|XP_011101728.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    68   1e-21
ref|XP_012839874.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    62   3e-15
gb|KJB14283.1| hypothetical protein B456_002G117600 [Gossypium r...    79   3e-15
gb|KVH70174.1| Tetratricopeptide-like helical, partial [Cynara c...    81   6e-15
ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citr...    67   2e-11
ref|XP_013441844.1| photosystem I assembly protein Ycf3, putativ...    57   1e-07
ref|XP_010277344.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    50   1e-07
ref|XP_009385352.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    53   1e-06
gb|EEF26886.1| conserved hypothetical protein [Ricinus communis]       40   2e-06
gb|KVH99474.1| hypothetical protein Ccrd_022292 [Cynara carduncu...    54   8e-06

>gb|KJB71940.1| hypothetical protein B456_011G148900, partial [Gossypium raimondii]
          Length = 208

 Score =  116 bits (291), Expect = 1e-28
 Identities = 77/162 (47%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
 Frame = -1

Query: 578 MFQFSILVLSERLHLEVLYYGAILLH*YQWKHKGRSTTPRNQQHENLVRNYPFPYCIGLG 399
           M Q  I VLSERLHL     G          H+GRSTTP NQQHEN V N       G  
Sbjct: 5   MLQLFIRVLSERLHLWACIVGQPYYTSTNRSHRGRSTTPGNQQHENFVINDSLSLS-GSE 63

Query: 398 TKRMVGTTNIHLVRTLDTNITIEGC*SD*FLEIRRR*KQRNCWSSHFYLVPIRLMLRNDL 219
            + MVGTTNIHLVRTLDT+ITIE                          +   LM+R DL
Sbjct: 64  LREMVGTTNIHLVRTLDTHITIED-------------------------LRTHLMIRKDL 98

Query: 218 LQEGWLEISCKNTSPAQFIMR-XXXXXXXXXXXXLMHIREEP 96
           LQEGWLEISCKN SPAQFIM              +MHI+EEP
Sbjct: 99  LQEGWLEISCKNISPAQFIMTIFRPFFLIPWIILIMHIKEEP 140


>ref|XP_011101728.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC105179794 [Sesamum indicum]
          Length = 66

 Score = 67.8 bits (164), Expect(3) = 1e-21
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = -3

Query: 411 YWARD*KNGWDNKHPSRSYFGYQYNHRRLLK 319
           Y ARD KNGWDNKHPSRSYFGYQYNHRRLLK
Sbjct: 36  YGARDXKNGWDNKHPSRSYFGYQYNHRRLLK 66



 Score = 58.2 bits (139), Expect(3) = 1e-21
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -1

Query: 488 KHKGRSTTPRNQQHENLVRNYPFPY 414
           +HKGRSTTPRNQQHENLVRNYPFPY
Sbjct: 12  QHKGRSTTPRNQQHENLVRNYPFPY 36



 Score = 25.4 bits (54), Expect(3) = 1e-21
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = -2

Query: 520 MGQSYSTSTNG 488
           MGQSYST+TNG
Sbjct: 1   MGQSYSTNTNG 11


>ref|XP_012839874.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC105960252 [Erythranthe guttata]
          Length = 67

 Score = 62.4 bits (150), Expect(2) = 3e-15
 Identities = 30/36 (83%), Positives = 30/36 (83%)
 Frame = -3

Query: 426 PLSLLYWARD*KNGWDNKHPSRSYFGYQYNHRRLLK 319
           PLSLL      KNGWDNKHPSRSYFGYQYNHRRLLK
Sbjct: 33  PLSLLGSGLX-KNGWDNKHPSRSYFGYQYNHRRLLK 67



 Score = 47.8 bits (112), Expect(2) = 3e-15
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = -1

Query: 488 KHKGRSTTPRNQQHENLVRNYP 423
           +HKGRSTTPRNQQHENL RNYP
Sbjct: 12  QHKGRSTTPRNQQHENLGRNYP 33


>gb|KJB14283.1| hypothetical protein B456_002G117600 [Gossypium raimondii]
          Length = 112

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 58/140 (41%), Positives = 64/140 (45%)
 Frame = -1

Query: 578 MFQFSILVLSERLHLEVLYYGAILLH*YQWKHKGRSTTPRNQQHENLVRNYPFPYCIGLG 399
           M Q  I VLSERLHL     G         +H+GRSTTPRNQQ EN   N  F    G  
Sbjct: 5   MLQLVIRVLSERLHLWACIVGQPYYTSTNRRHRGRSTTPRNQQQENFFINGSFSLS-GSE 63

Query: 398 TKRMVGTTNIHLVRTLDTNITIEGC*SD*FLEIRRR*KQRNCWSSHFYLVPIRLMLRNDL 219
            + +VG  +  L RT                                     RLM+R DL
Sbjct: 64  LRELVGNKHPSL-RT-------------------------------------RLMVRKDL 85

Query: 218 LQEGWLEISCKNTSPAQFIM 159
           LQEGWLEISCKN SPAQFIM
Sbjct: 86  LQEGWLEISCKNISPAQFIM 105


>gb|KVH70174.1| Tetratricopeptide-like helical, partial [Cynara cardunculus var.
           scolymus]
          Length = 216

 Score = 80.9 bits (198), Expect = 6e-15
 Identities = 61/149 (40%), Positives = 70/149 (46%)
 Frame = -1

Query: 779 GIYLLQRWCDXXXXXXXXXXXXXXSVLRERHVIREKF*NKSTLVEGEVWK*NNSFCRVSS 600
           GIYLLQRWCD               VL+E H+I ++  +K  +    + K NNSFC +SS
Sbjct: 12  GIYLLQRWCDLIFLYLS--------VLQETHMILDR--DKKKIKNLRLLK-NNSFCHISS 60

Query: 599 INATSDAMFQFSILVLSERLHLEVLYYGAILLH*YQWKHKGRSTTPRNQQHENLVRNYPF 420
           IN TS A+FQFSILVLSER                                         
Sbjct: 61  INDTSVAIFQFSILVLSER----------------------------------------- 79

Query: 419 PYCIGLGTKRMVGTTNIHLVRTLDTNITI 333
                LGTKRMVGTTNIHLV  LDT ITI
Sbjct: 80  -----LGTKRMVGTTNIHLVCILDTRITI 103


>ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citrus clementina]
           gi|557547807|gb|ESR58767.1| hypothetical protein
           CICLE_v10004111mg [Citrus clementina]
          Length = 58

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 41/71 (57%), Positives = 41/71 (57%)
 Frame = -3

Query: 531 GSVLWGNPTPLVPMEA*GKKHYT*ESTTRKPC*KLPLSLLYWARD*KNGWDNKHPSRSYF 352
           GSVL  NPT             T ES TRK C KLP   L      KNGWDNKHPSRSY 
Sbjct: 2   GSVLQVNPT-------------TPESATRKLCYKLP-PFLSGIGTKKNGWDNKHPSRSYC 47

Query: 351 GYQYNHRRLLK 319
           GY YNHRRLLK
Sbjct: 48  GYPYNHRRLLK 58


>ref|XP_013441844.1| photosystem I assembly protein Ycf3, putative [Medicago truncatula]
           gi|922367093|ref|XP_013455713.1| photosystem I assembly
           protein Ycf3, putative [Medicago truncatula]
           gi|657369413|gb|KEH15869.1| photosystem I assembly
           protein Ycf3, putative [Medicago truncatula]
           gi|657387658|gb|KEH29744.1| photosystem I assembly
           protein Ycf3, putative [Medicago truncatula]
          Length = 66

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = -3

Query: 390 NGWDNKHPSRSYFGYQYNHRRLLK 319
           NGWDNKHPSRSYFGY YNHRRLLK
Sbjct: 43  NGWDNKHPSRSYFGYPYNHRRLLK 66


>ref|XP_010277344.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC104611814 [Nelumbo nucifera]
          Length = 190

 Score = 50.1 bits (118), Expect(2) = 1e-07
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = -3

Query: 393 KNGWDNKHPSRSYFGYQYNHRRLLK 319
           KNGWDNKHPSR +FGY YNHR  LK
Sbjct: 166 KNGWDNKHPSRFHFGYPYNHRTPLK 190



 Score = 33.9 bits (76), Expect(2) = 1e-07
 Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = -1

Query: 485 HKGRSTTPRNQQHENLVRNYPF-PYCIGLGTKR 390
           H+ +STTPRNQQH+N V    +  + IG+G+ +
Sbjct: 134 HRDQSTTPRNQQHKNFVIVIKYSXFLIGIGSNK 166


>ref|XP_009385352.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC103972735, partial [Musa acuminata subsp.
           malaccensis]
          Length = 47

 Score = 52.8 bits (125), Expect(2) = 1e-06
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = -3

Query: 393 KNGWDNKHPSRSYFGYQYNHRR 328
           KNGWDNKHPSRSYFGY YNH+R
Sbjct: 26  KNGWDNKHPSRSYFGYPYNHQR 47



 Score = 27.7 bits (60), Expect(2) = 1e-06
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -1

Query: 470 TTPRNQQHENLVRN 429
           TTPRNQQH+N V N
Sbjct: 1   TTPRNQQHKNFVIN 14


>gb|EEF26886.1| conserved hypothetical protein [Ricinus communis]
          Length = 110

 Score = 40.4 bits (93), Expect(2) = 2e-06
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = -2

Query: 490 GSIREEALHLGINNTKTLLEITPF 419
           G I+EEAL LGINNTK LLEI PF
Sbjct: 81  GGIKEEALRLGINNTKPLLEIFPF 104



 Score = 39.7 bits (91), Expect(2) = 2e-06
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -1

Query: 647 EGEVWK*NNSFCRVSSINATSDA 579
           +GEV+K NNSFCRVS INA SDA
Sbjct: 39  DGEVYKENNSFCRVSPINAASDA 61


>gb|KVH99474.1| hypothetical protein Ccrd_022292 [Cynara cardunculus var. scolymus]
          Length = 129

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 44/110 (40%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
 Frame = -1

Query: 704 VLRERHVIR--EKF*NKSTLVEGEVWK*NNSFCRVSSINATSDAMFQFSILVLSERLHLE 531
           VLRE ++IR  +K   KSTLVEG+VWK   S                    V+  RL   
Sbjct: 42  VLRETNMIRHWDKKKKKSTLVEGKVWKTIPS--------------------VVYPRLMQP 81

Query: 530 VLYYGAILLH*YQWKHKGRSTTPRNQQHENLVRNYPFPYCIGLGTKRMVG 381
                       Q + +GRSTTPRNQQHEN V NYP     GLG K  +G
Sbjct: 82  ------------QMQQRGRSTTPRNQQHENFVLNYPL---AGLGLKEWLG 116


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